BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0043.0001.p (750 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767626.1| 3-methylcrotonyl-CoA carboxylase beta subunit [... 834 0.0 ref|YP_001236849.1| putative carboxylase [Bradyrhizobium sp. BTA... 826 0.0 ref|YP_781176.1| propionyl-CoA carboxylase [Rhodopseudomonas pal... 823 0.0 ref|YP_001208684.1| putative carboxylase substrate acetyl-CoA, p... 820 0.0 ref|YP_533062.1| propionyl-CoA carboxylase [Rhodopseudomonas pal... 812 0.0 >ref|NP_767626.1| 3-methylcrotonyl-CoA carboxylase beta subunit [Bradyrhizobium japonicum USDA 110] dbj|BAC46251.1| 3-methylcrotonyl-CoA carboxylase beta subunit [Bradyrhizobium japonicum USDA 110] Length = 538 Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/443 (90%), Positives = 421/443 (95%) Query: 1 VAIIENTISTGSAAFQGNRDGMLALIARMRALEERTRAASAVAKDRFHKRGQLLPRERVA 60 ++I+ENTIS GSAA+ NRDGML LI RMRALEERTRAASA AKDRFHKRGQLLPRERVA Sbjct: 1 MSILENTISPGSAAYHANRDGMLGLIDRMRALEERTRAASAAAKDRFHKRGQLLPRERVA 60 Query: 61 LVLDPGSPFLELSTLAGYMFDVADADKSVPGGGLVAGIGFVSGIRCMVSANDAGIDAGAL 120 LVLDPG+PF+ELSTLAGYMFDV D +KSVPGGG++AGIGFVSGIRCMVSA+D+GIDAGAL Sbjct: 61 LVLDPGAPFIELSTLAGYMFDVPDPNKSVPGGGVIAGIGFVSGIRCMVSASDSGIDAGAL 120 Query: 121 QPYGLDKTLRVQELALENKLPYVQLVESAGANLLRYRVEDFVRGGNIFRNLARLSAAGLP 180 QP+GLDKTLRVQELALENKLPYVQLVESAGANLLRYRVEDFVRGGNIFRNLARLSAAGLP Sbjct: 121 QPFGLDKTLRVQELALENKLPYVQLVESAGANLLRYRVEDFVRGGNIFRNLARLSAAGLP 180 Query: 181 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT 240 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT Sbjct: 181 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT 240 Query: 241 SISGLGDYLAEDDRDALRIARDIMAKLPWDRPDREPAAFKPPRYDAEELLGIMPMDHKRP 300 +SGLGDYLAEDDRDALRIAR+IMA L W+RPDR A FKPPRYD +ELLGIMPMDHKRP Sbjct: 241 QVSGLGDYLAEDDRDALRIAREIMAALEWERPDRAAAQFKPPRYDQDELLGIMPMDHKRP 300 Query: 301 VDMRQAIARFIDDSDFTEFGANYGPATVCGHARIQGQAIGIITNNGPLDVPGANKATHFI 360 VDM+Q IAR IDDSDFTE NYGPATVCGHARI+GQAIGIITNNGPLD GANKATHFI Sbjct: 301 VDMKQVIARIIDDSDFTEMAPNYGPATVCGHARIEGQAIGIITNNGPLDPAGANKATHFI 360 Query: 361 QACCQSRTPILYMNNTTGYMVGRAYEEAGMIKHGSKMIQAVTSATVPQITLYCGASFGAG 420 QACCQ+RTPILY+NNTTGYMVG+AYEEAGMIKHGSKMIQAVTSATVPQIT+YCGASFGAG Sbjct: 361 QACCQTRTPILYLNNTTGYMVGKAYEEAGMIKHGSKMIQAVTSATVPQITIYCGASFGAG 420 Query: 421 NYGMCGRGFHPRFCFSWPNAKTA 443 NYGMCGRGFHPRFCFSWPNAKTA Sbjct: 421 NYGMCGRGFHPRFCFSWPNAKTA 443 >ref|YP_001236849.1| putative carboxylase [Bradyrhizobium sp. BTAi1] gb|ABQ32943.1| Putative carboxylase [Bradyrhizobium sp. BTAi1] Length = 538 Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/443 (89%), Positives = 414/443 (93%) Query: 1 VAIIENTISTGSAAFQGNRDGMLALIARMRALEERTRAASAVAKDRFHKRGQLLPRERVA 60 +AII+NTIS AAFQ NRDGML LI RMR LE RTR ASA AKDRFH+RGQLLPRERVA Sbjct: 1 MAIIDNTISPTGAAFQANRDGMLGLIGRMRDLEARTRNASAAAKDRFHQRGQLLPRERVA 60 Query: 61 LVLDPGSPFLELSTLAGYMFDVADADKSVPGGGLVAGIGFVSGIRCMVSANDAGIDAGAL 120 LVLDPG+PFLELSTLAGYMFDV D KSVPGGG+VAGIGFVSG+RCMVSANDAGIDAGAL Sbjct: 61 LVLDPGAPFLELSTLAGYMFDVPDPAKSVPGGGVVAGIGFVSGVRCMVSANDAGIDAGAL 120 Query: 121 QPYGLDKTLRVQELALENKLPYVQLVESAGANLLRYRVEDFVRGGNIFRNLARLSAAGLP 180 QPYGLDKTLRVQELALENKLPYVQLVESAGANLLRYRVEDFVRGGNIFRNLARLSAAGLP Sbjct: 121 QPYGLDKTLRVQELALENKLPYVQLVESAGANLLRYRVEDFVRGGNIFRNLARLSAAGLP 180 Query: 181 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT 240 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT Sbjct: 181 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT 240 Query: 241 SISGLGDYLAEDDRDALRIARDIMAKLPWDRPDREPAAFKPPRYDAEELLGIMPMDHKRP 300 S+SGLGDYLAEDDRDALRIAR+IM KL WDRP R+ KPPRYD EELLGIMP+DHKRP Sbjct: 241 SVSGLGDYLAEDDRDALRIAREIMGKLNWDRPSRDATTAKPPRYDQEELLGIMPLDHKRP 300 Query: 301 VDMRQAIARFIDDSDFTEFGANYGPATVCGHARIQGQAIGIITNNGPLDVPGANKATHFI 360 VDMRQ IAR +DDSDF E NYGPATVCGHARI+GQAIGI+TNNGPLD GANKATHFI Sbjct: 301 VDMRQVIARIVDDSDFVEMSPNYGPATVCGHARIEGQAIGIVTNNGPLDPAGANKATHFI 360 Query: 361 QACCQSRTPILYMNNTTGYMVGRAYEEAGMIKHGSKMIQAVTSATVPQITLYCGASFGAG 420 QACCQ+RTPILY+NNTTGY+VGRAYEEAGMIKHGSKMIQAVTSATVPQIT+YCGASFGAG Sbjct: 361 QACCQTRTPILYLNNTTGYIVGRAYEEAGMIKHGSKMIQAVTSATVPQITIYCGASFGAG 420 Query: 421 NYGMCGRGFHPRFCFSWPNAKTA 443 NYGMCGRGFHPRFCFSWPNAKTA Sbjct: 421 NYGMCGRGFHPRFCFSWPNAKTA 443 >ref|YP_781176.1| propionyl-CoA carboxylase [Rhodopseudomonas palustris BisA53] gb|ABJ06196.1| Propionyl-CoA carboxylase [Rhodopseudomonas palustris BisA53] Length = 539 Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/444 (88%), Positives = 422/444 (95%), Gaps = 1/444 (0%) Query: 1 VAIIENTISTGSAAFQGNRDGMLALIARMRALEERTRAASAVAKDRFHKRGQLLPRERVA 60 +A+IE+TI+ G AF+ NRDGMLALIARMR LEERTRAASA + +RFHKRGQLLPRERVA Sbjct: 1 MALIESTIAPGGDAFKANRDGMLALIARMRELEERTRAASAKSGERFHKRGQLLPRERVA 60 Query: 61 LVLDPGSPFLELSTLAGYMFDVADADKSVPGGGLVAGIGFVSGIRCMVSANDAGIDAGAL 120 L+LDPG+PFLELSTLAGYMFD ADA KSVPGGG++AGIGFV+GIRCMVSAND+GIDAGAL Sbjct: 61 LLLDPGTPFLELSTLAGYMFDTADAAKSVPGGGVIAGIGFVAGIRCMVSANDSGIDAGAL 120 Query: 121 QPYGLDKTLRVQELALENKLPYVQLVESAGANLLRYRVEDFVRGGNIFRNLARLSAAGLP 180 QP+GLDKTLRVQE+ALENKLP++QLVESAGANL+RYRVEDFVRGGNIFRNLAR+SAAGLP Sbjct: 121 QPFGLDKTLRVQEMALENKLPFLQLVESAGANLMRYRVEDFVRGGNIFRNLARMSAAGLP 180 Query: 181 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT 240 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT Sbjct: 181 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT 240 Query: 241 SISGLGDYLAEDDRDALRIARDIMAKLPWDRPDRE-PAAFKPPRYDAEELLGIMPMDHKR 299 SISGLGDYLAEDDRDALRIARDIMA L WDRP + ++FKPPRYDA+ELLG+MPMDHKR Sbjct: 241 SISGLGDYLAEDDRDALRIARDIMAGLNWDRPAPDATSSFKPPRYDADELLGVMPMDHKR 300 Query: 300 PVDMRQAIARFIDDSDFTEFGANYGPATVCGHARIQGQAIGIITNNGPLDVPGANKATHF 359 PVDMRQ IARF+DDSDFTE NYGPATVCGHARI+G A+GIITNNGPLD GANKATHF Sbjct: 301 PVDMRQVIARFVDDSDFTEMSPNYGPATVCGHARIEGHAVGIITNNGPLDPAGANKATHF 360 Query: 360 IQACCQSRTPILYMNNTTGYMVGRAYEEAGMIKHGSKMIQAVTSATVPQITLYCGASFGA 419 IQACCQSRTPILY+NNTTGYMVGRAYEEAGMIKHGSKMIQAVTSATVPQITLYCGASFGA Sbjct: 361 IQACCQSRTPILYLNNTTGYMVGRAYEEAGMIKHGSKMIQAVTSATVPQITLYCGASFGA 420 Query: 420 GNYGMCGRGFHPRFCFSWPNAKTA 443 GNYGMCGRGFHPRFCFSWPNAKTA Sbjct: 421 GNYGMCGRGFHPRFCFSWPNAKTA 444 >ref|YP_001208684.1| putative carboxylase substrate acetyl-CoA, propionyl-CoA, methylcrotonoyl-CoA [Bradyrhizobium sp. ORS 278] emb|CAL80469.1| Putative carboxylase; putative substrate: acetyl-CoA, propionyl-CoA, methylcrotonoyl-CoA [Bradyrhizobium sp. ORS 278] Length = 538 Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/443 (88%), Positives = 412/443 (93%) Query: 1 VAIIENTISTGSAAFQGNRDGMLALIARMRALEERTRAASAVAKDRFHKRGQLLPRERVA 60 +AII+NTIS AAFQ NRDGML LIARMR LE RTR ASA AKDRFH+RGQLLPRERVA Sbjct: 1 MAIIDNTISPTGAAFQTNRDGMLGLIARMRELEARTRKASAAAKDRFHQRGQLLPRERVA 60 Query: 61 LVLDPGSPFLELSTLAGYMFDVADADKSVPGGGLVAGIGFVSGIRCMVSANDAGIDAGAL 120 LVLDPG+PFLELSTLAGYMFD D KSVPGGG++AGIGFVSG+RCMVSANDA IDAGAL Sbjct: 61 LVLDPGAPFLELSTLAGYMFDTPDPAKSVPGGGVIAGIGFVSGVRCMVSANDAAIDAGAL 120 Query: 121 QPYGLDKTLRVQELALENKLPYVQLVESAGANLLRYRVEDFVRGGNIFRNLARLSAAGLP 180 QPYGLDKTLRVQELALEN+LPYVQLVESAGANLLRYRVEDFVRGGNIFRNLARLSAAGLP Sbjct: 121 QPYGLDKTLRVQELALENRLPYVQLVESAGANLLRYRVEDFVRGGNIFRNLARLSAAGLP 180 Query: 181 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT 240 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT Sbjct: 181 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT 240 Query: 241 SISGLGDYLAEDDRDALRIARDIMAKLPWDRPDREPAAFKPPRYDAEELLGIMPMDHKRP 300 +ISGLGDYLAEDDRD LRIAR+IM +L WDRP E A KPPRYD EELLGIMP+DHKRP Sbjct: 241 AISGLGDYLAEDDRDGLRIAREIMGRLNWDRPSHEACAAKPPRYDQEELLGIMPLDHKRP 300 Query: 301 VDMRQAIARFIDDSDFTEFGANYGPATVCGHARIQGQAIGIITNNGPLDVPGANKATHFI 360 VDMRQ IAR +DDSDF E NYGPATVCGHARI+G+AIGI+TNNGPLD GANKATHFI Sbjct: 301 VDMRQVIARIVDDSDFVEMSPNYGPATVCGHARIEGEAIGIVTNNGPLDPAGANKATHFI 360 Query: 361 QACCQSRTPILYMNNTTGYMVGRAYEEAGMIKHGSKMIQAVTSATVPQITLYCGASFGAG 420 QACCQSRTPILY+NNTTGYMVGRAYEEAGMIKHGSKMIQAVTSATVPQIT+YCGASFGAG Sbjct: 361 QACCQSRTPILYLNNTTGYMVGRAYEEAGMIKHGSKMIQAVTSATVPQITIYCGASFGAG 420 Query: 421 NYGMCGRGFHPRFCFSWPNAKTA 443 NYGMCGRGFHPRFCFSWPNAKTA Sbjct: 421 NYGMCGRGFHPRFCFSWPNAKTA 443 >ref|YP_533062.1| propionyl-CoA carboxylase [Rhodopseudomonas palustris BisB18] gb|ABD88743.1| Propionyl-CoA carboxylase [Rhodopseudomonas palustris BisB18] Length = 538 Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/443 (87%), Positives = 415/443 (93%) Query: 1 VAIIENTISTGSAAFQGNRDGMLALIARMRALEERTRAASAVAKDRFHKRGQLLPRERVA 60 +AII++TI+ G AF+ NRDGMLALIARMR LEER R ASA + +RFHKRGQLLPRERVA Sbjct: 1 MAIIDSTIAPGGEAFKANRDGMLALIARMRELEERARKASAASGERFHKRGQLLPRERVA 60 Query: 61 LVLDPGSPFLELSTLAGYMFDVADADKSVPGGGLVAGIGFVSGIRCMVSANDAGIDAGAL 120 L+LDPG+PFLELSTLAGY+FD ADA KSVPGGG++AGIGFVSG+RCM+SAND+GIDAGAL Sbjct: 61 LLLDPGAPFLELSTLAGYLFDTADAAKSVPGGGVIAGIGFVSGVRCMISANDSGIDAGAL 120 Query: 121 QPYGLDKTLRVQELALENKLPYVQLVESAGANLLRYRVEDFVRGGNIFRNLARLSAAGLP 180 QPYGLDKTLRVQ+LALENKLP+VQLVESAGANL+RYRVEDFVRGGNIFRNLA +SAAGLP Sbjct: 121 QPYGLDKTLRVQQLALENKLPFVQLVESAGANLMRYRVEDFVRGGNIFRNLALMSAAGLP 180 Query: 181 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT 240 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT Sbjct: 181 VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT 240 Query: 241 SISGLGDYLAEDDRDALRIARDIMAKLPWDRPDREPAAFKPPRYDAEELLGIMPMDHKRP 300 S+SGLGDYLAEDDRDALRIARDIMA L WDRP + KPPRYDAE+LLGIMPMDHKRP Sbjct: 241 SVSGLGDYLAEDDRDALRIARDIMASLQWDRPAALGRSSKPPRYDAEQLLGIMPMDHKRP 300 Query: 301 VDMRQAIARFIDDSDFTEFGANYGPATVCGHARIQGQAIGIITNNGPLDVPGANKATHFI 360 VDMRQ IAR +DDSDFTE NYGPATVCGHARI+G AIGI+TNNGPLD GANKATHFI Sbjct: 301 VDMRQVIARIVDDSDFTEISPNYGPATVCGHARIEGAAIGIVTNNGPLDPAGANKATHFI 360 Query: 361 QACCQSRTPILYMNNTTGYMVGRAYEEAGMIKHGSKMIQAVTSATVPQITLYCGASFGAG 420 QACCQS+TPILY+NNTTGYMVGRAYEEAGMIKHGSKMIQAVTSATVPQIT+YCGASFGAG Sbjct: 361 QACCQSKTPILYLNNTTGYMVGRAYEEAGMIKHGSKMIQAVTSATVPQITIYCGASFGAG 420 Query: 421 NYGMCGRGFHPRFCFSWPNAKTA 443 NYGMCGRGFHPRFCF+WPNAKTA Sbjct: 421 NYGMCGRGFHPRFCFAWPNAKTA 443