BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0042.0006.p         (126 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771251.1| hypothetical protein blr4611 [Bradyrhizobium ja...   207   5e-52
ref|YP_001205754.1| hypothetical protein BRADO3758 [Bradyrhizobi...   206   1e-51
ref|YP_781700.1| hypothetical protein RPE_2783 [Rhodopseudomonas...   198   2e-49
ref|YP_569745.1| hypothetical protein RPD_2615 [Rhodopseudomonas...   195   2e-48
ref|YP_532472.1| hypothetical protein RPC_2603 [Rhodopseudomonas...   194   3e-48

>ref|NP_771251.1| hypothetical protein blr4611 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49876.1| blr4611 [Bradyrhizobium japonicum USDA 110]
          Length = 126

 Score =  207 bits (527), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 104/126 (82%), Positives = 115/126 (91%)

Query: 1   MTKPPFRLSPYQVQFLMVVGFVTVGYALYVRYLAIEFSPVALACDAGAQTMLCKARALST 60
           MTK PFRL+PYQVQFL+VVGFV VGYA+Y+RYL IE S V LACDAG QT++CKAR++ST
Sbjct: 1   MTKKPFRLTPYQVQFLIVVGFVAVGYAIYLRYLGIENSNVGLACDAGLQTLMCKARSVST 60

Query: 61  VLFKNSVFGITALVIAVLNLTRPSIVLLTVGLIAAGLGIVLYNVVLSGLAIGLFILGFAR 120
           VLFKNSVFGI ALV+A LNL RPSIVLLTVG++AAGLGIVLYNVVLSGLAIGL ILGFAR
Sbjct: 61  VLFKNSVFGIVALVVATLNLMRPSIVLLTVGVVAAGLGIVLYNVVLSGLAIGLLILGFAR 120

Query: 121 PAPATA 126
           PAPATA
Sbjct: 121 PAPATA 126


>ref|YP_001205754.1| hypothetical protein BRADO3758 [Bradyrhizobium sp. ORS 278]
 ref|YP_001240137.1| hypothetical protein BBta_4170 [Bradyrhizobium sp. BTAi1]
 emb|CAL77528.1| conserved hypothetical protein; putative membrane protein
           [Bradyrhizobium sp. ORS 278]
 gb|ABQ36231.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 126

 Score =  206 bits (523), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 104/126 (82%), Positives = 115/126 (91%)

Query: 1   MTKPPFRLSPYQVQFLMVVGFVTVGYALYVRYLAIEFSPVALACDAGAQTMLCKARALST 60
           M K PFRLSPYQVQ+L++VGFVTVGYALY+RYLAIE S VALACDAG QT+ CK+RA++T
Sbjct: 1   MKKTPFRLSPYQVQWLLIVGFVTVGYALYLRYLAIELSSVALACDAGLQTLACKSRAVAT 60

Query: 61  VLFKNSVFGITALVIAVLNLTRPSIVLLTVGLIAAGLGIVLYNVVLSGLAIGLFILGFAR 120
            LFKNSVFG TALVIAVL++ RPSIVLLT GLIAAGLGIVLYN+VLSGLAIGL ILGFAR
Sbjct: 61  TLFKNSVFGATALVIAVLHVMRPSIVLLTGGLIAAGLGIVLYNIVLSGLAIGLLILGFAR 120

Query: 121 PAPATA 126
           PAPATA
Sbjct: 121 PAPATA 126


>ref|YP_781700.1| hypothetical protein RPE_2783 [Rhodopseudomonas palustris BisA53]
 gb|ABJ06720.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 126

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 100/126 (79%), Positives = 110/126 (87%)

Query: 1   MTKPPFRLSPYQVQFLMVVGFVTVGYALYVRYLAIEFSPVALACDAGAQTMLCKARALST 60
           M K PFRL+PYQVQ+L++VGFVTVGYALY+RYLAIE S VALACDAG QTMLCK R L T
Sbjct: 1   MKKEPFRLTPYQVQWLLIVGFVTVGYALYLRYLAIELSSVALACDAGLQTMLCKTRLLMT 60

Query: 61  VLFKNSVFGITALVIAVLNLTRPSIVLLTVGLIAAGLGIVLYNVVLSGLAIGLFILGFAR 120
            LF+NSVFGI ALVIAVL++ RPSIVLLT GL AAG GIVLYN+ LSG+AIGL ILGFAR
Sbjct: 61  YLFRNSVFGIAALVIAVLHVIRPSIVLLTAGLAAAGFGIVLYNIALSGVAIGLLILGFAR 120

Query: 121 PAPATA 126
           PAPATA
Sbjct: 121 PAPATA 126


>ref|YP_569745.1| hypothetical protein RPD_2615 [Rhodopseudomonas palustris BisB5]
 gb|ABE39844.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 126

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 97/126 (76%), Positives = 110/126 (87%)

Query: 1   MTKPPFRLSPYQVQFLMVVGFVTVGYALYVRYLAIEFSPVALACDAGAQTMLCKARALST 60
           M K PFRLSPYQVQ+L++VGF+TVGYALY+RYLAIE S VALACDAG Q+MLCK R L T
Sbjct: 1   MKKQPFRLSPYQVQWLLIVGFLTVGYALYLRYLAIELSTVALACDAGLQSMLCKTRLLMT 60

Query: 61  VLFKNSVFGITALVIAVLNLTRPSIVLLTVGLIAAGLGIVLYNVVLSGLAIGLFILGFAR 120
            LF+NSVFGI A+VIA+L+  RPSIVLLT GL+AAG GIVLYN+ LSG+AIGL ILGFAR
Sbjct: 61  YLFRNSVFGIAAVVIAILHFIRPSIVLLTAGLVAAGFGIVLYNIGLSGIAIGLLILGFAR 120

Query: 121 PAPATA 126
           PAPATA
Sbjct: 121 PAPATA 126


>ref|YP_532472.1| hypothetical protein RPC_2603 [Rhodopseudomonas palustris BisB18]
 gb|ABD88153.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
          Length = 126

 Score =  194 bits (494), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 99/126 (78%), Positives = 110/126 (87%)

Query: 1   MTKPPFRLSPYQVQFLMVVGFVTVGYALYVRYLAIEFSPVALACDAGAQTMLCKARALST 60
           M K PFRL+PYQVQ+L++VGF+TVGYALY+RYLAIE S VALACDAG  TMLCK R L T
Sbjct: 1   MKKQPFRLTPYQVQWLLIVGFLTVGYALYLRYLAIELSTVALACDAGLPTMLCKTRILMT 60

Query: 61  VLFKNSVFGITALVIAVLNLTRPSIVLLTVGLIAAGLGIVLYNVVLSGLAIGLFILGFAR 120
            LF+NSVFGI ALVIAVL++ RPSIVLLT GL+AAG GIVLYN+ LSGLAIGL ILGFAR
Sbjct: 61  YLFRNSVFGIAALVIAVLHVIRPSIVLLTAGLVAAGFGIVLYNIGLSGLAIGLLILGFAR 120

Query: 121 PAPATA 126
           PAPATA
Sbjct: 121 PAPATA 126