BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0071.p (724 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_356349.1| two component sensor kinase [Agrobacterium tume... 770 0.0 ref|ZP_08530971.1| two component sensor kinase [Agrobacterium sp... 764 0.0 ref|YP_002823887.1| two component sensor-kinase [Sinorhizobium f... 752 0.0 ref|YP_004614078.1| PAS/PAC sensor signal transduction histidine... 732 0.0 ref|YP_002973360.1| PAS/PAC sensor signal transduction histidine... 726 0.0 >ref|NP_356349.1| two component sensor kinase [Agrobacterium tumefaciens str. C58] gb|AAK89134.1| two component sensor kinase [Agrobacterium tumefaciens str. C58] Length = 880 Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/642 (59%), Positives = 479/642 (74%), Gaps = 6/642 (0%) Query: 88 SSAKLSADAVQAMRIIESMPAYTWSASPDGHITHVSASTLSYLGELADKTGL------FH 141 SS + +AVQA IE + W+ G T+ + ++ + + D F Sbjct: 236 SSFGETRNAVQAALAIEKLYGDAWAIDAIGQFTYATPASQNSVARALDDLNALLDDKPFL 295 Query: 142 ILDNAGWRRAIHPDDYAQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQ 201 GW+R IHPDD + E R L+TG ++ EYR +DG+Y W R+ +RDEQ Sbjct: 296 GGGRQGWQRGIHPDDSDRAAETLRRCLRTGEHWNCEYRAARADGSYVWHRAAARPTRDEQ 355 Query: 202 GELAGWYGTMIDIEAKKQAEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNKRFKVA 261 G + GWYGT +DI+ K+ E ALR+ ERQLQQLID VPALIWST G P YVN++F Sbjct: 356 GRITGWYGTALDIDVYKRTEAALRERERQLQQLIDTVPALIWSTMADGAPAYVNRQFTEV 415 Query: 262 TGASLEDITAPDGSPSLSVVHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAGGAYHWTET 321 TGA+LED+TAP+GSPSL VVHP+DRAAA A S G PY+ YRQLRAGG+Y WTET Sbjct: 416 TGATLEDMTAPNGSPSLGVVHPEDRAAAREAFLRSVEAGIPYLQRYRQLRAGGSYRWTET 475 Query: 322 RAEPLRDDAGDIIQWYGVSVDIHDLVTAQEAVKESERSLRQLVETLPAMIDCAAPDGEPI 381 RAEPLRDD G II WYGVS DIHDL+T QEA++ESER L+QLVETLPA+I CA PDG+PI Sbjct: 476 RAEPLRDDTGTIIYWYGVSSDIHDLITTQEALRESERHLQQLVETLPALIYCALPDGKPI 535 Query: 382 YRSRQLREFLGYNLEELDGNEKGRLEATLDAGVHPDDLDGVKERYAHSLASGEPYARRHR 441 YRS++LR++LG+NLE+ DG K RL+ TLDA +HPDDL VKE YAHSLA+GEPY +RHR Sbjct: 536 YRSQRLRQYLGFNLEDTDGFGKSRLDGTLDAVIHPDDLAVVKEHYAHSLATGEPYLQRHR 595 Query: 442 LRRFDGEYRWVETRAGAMRNADGAIVQWNVICLDIDAEVRTQEELRMAQAELAGASQAAS 501 LRRFDG YRWVETRA AMRN DG I QWN ICLDI+ +V+ QEEL A LA +SQAAS Sbjct: 596 LRRFDGVYRWVETRASAMRNGDGEIAQWNGICLDIEDQVQAQEELSRAHENLARSSQAAS 655 Query: 502 LAELSASIAHEVNQPLAAVVANSHACQRWLTADPPNLERARKTVERIIRDANGAAEVVSR 561 LAELSASIAHEVNQPL+AV+ S ACQRWLTA+PPN+ERA+KT+ERI++ AN AA+VVSR Sbjct: 656 LAELSASIAHEVNQPLSAVMNYSSACQRWLTAEPPNIERAQKTLERIVQSANSAADVVSR 715 Query: 562 IRALFRQSLDKRNSAELGSIIAEVRELMSEEAVRRRIRLDIDVESAIPPVKVDRVQIQQV 621 IRALFRQS DKR+S ELG+++ + R+L++EEA RRRIR+ ++ ES + V DRVQIQQV Sbjct: 716 IRALFRQSTDKRDSTELGAVVRQARDLLAEEAGRRRIRMTVEGESGLLLVPFDRVQIQQV 775 Query: 622 LSNLIRNGMEAMERAVGDRSIRIRLDRIEDAVRVRISDRGPGVEFPDRVFQPFFTTKESG 681 L NL+RNGM+AM +R +++R R D VR+ ++DRG GV+FPDR+F+PFFTTK+ G Sbjct: 776 LVNLLRNGMDAMASVANERVLQVRAFRAGDMVRIEVADRGRGVQFPDRIFEPFFTTKDQG 835 Query: 682 MGMGLAICRSIVESHGGHLWAEENEPHGASFIFTLPIEANRV 723 MGMGLAICRSI+E+H G LWAE+NEP G+ F+FTLP++ ++ Sbjct: 836 MGMGLAICRSIIEAHEGQLWAEKNEPIGSKFVFTLPLDIAKI 877 Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 112/361 (31%), Positives = 164/361 (45%), Gaps = 34/361 (9%) Query: 152 IHPDDYAQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGELAGWYGTM 211 +HP D A + + + G+P YR +DG+YR + + E Sbjct: 169 VHPHDRAAIEQAAARAFFHGIPQITRYRELQADGSYRQV--------ELRLEPENGVSAE 220 Query: 212 IDIEAKKQAEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNK--RFKVATGASLEDI 269 +D +Q E +R S + +AV A + +G ++ +F AT AS + Sbjct: 221 VDPAMTRQDEPWMRAS--SFGETRNAVQAALAIEKLYGDAWAIDAIGQFTYATPASQNSV 278 Query: 270 T--------APDGSPSL--------SVVHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAG 313 D P L +HPDD A + RTGE + YR RA Sbjct: 279 ARALDDLNALLDDKPFLGGGRQGWQRGIHPDDSDRAAETLRRCLRTGEHWNCEYRAARAD 338 Query: 314 GAYHWTETRAEPLRDDAGDIIQWYGVSVDIHDLVTAQEAVKESERSLRQLVETLPAMIDC 373 G+Y W A P RD+ G I WYG ++DI + A++E ER L+QL++T+PA+I Sbjct: 339 GSYVWHRAAARPTRDEQGRITGWYGTALDIDVYKRTEAALRERERQLQQLIDTVPALIWS 398 Query: 374 AAPDGEPIYRSRQLREFLGYNLEELDG-NEKGRLEATLDAGVHPDDLDGVKERYAHSLAS 432 DG P Y +RQ E G LE++ N L VHP+D +E + S+ + Sbjct: 399 TMADGAPAYVNRQFTEVTGATLEDMTAPNGSPSLGV-----VHPEDRAAAREAFLRSVEA 453 Query: 433 GEPYARRHRLRRFDGEYRWVETRAGAMRNADGAIVQWNVICLDIDAEVRTQEELRMAQAE 492 G PY +R+R R G YRW ETRA +R+ G I+ W + DI + TQE LR ++ Sbjct: 454 GIPYLQRYRQLRAGGSYRWTETRAEPLRDDTGTIIYWYGVSSDIHDLITTQEALRESERH 513 Query: 493 L 493 L Sbjct: 514 L 514 Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 114/413 (27%), Positives = 174/413 (42%), Gaps = 63/413 (15%) Query: 95 DAVQAMRIIESMPAYTWSASPDGHITHVSASTLSYLGELADKTGLFHILDNAGWRRAIHP 154 DAV+A +++E + W+A +G+ +V+ + L++ G + GW+R IHP Sbjct: 22 DAVEAAKVVERIIGNAWAADANGNFIYVTPAALAFFGISLESLNSQSGESAFGWKRVIHP 81 Query: 155 DDYAQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGELAGWYGTMIDI 214 +DY R L+TG ++ E+R+ + G Y W RS G RD G + GWYGT+IDI Sbjct: 82 EDYESAAAAWRRCLRTGEHYNVEHRMLRATGVYGWARSTGQPIRDGNGVILGWYGTVIDI 141 Query: 215 EAKKQAEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNKRFKVATGASLEDITAPDG 274 AL E + R + G + +DI Sbjct: 142 --------ALASRE--------------------------DNRDDPSAGRTPQDILR--- 164 Query: 275 SPSLSVVHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAGGAYHWTETRAEPLRDDAGDII 334 S+ VHP DRAA A +F G P + YR+L+A G+Y E R EP Sbjct: 165 --SMDTVHPHDRAAIEQAAARAFFHGIPQITRYRELQADGSYRQVELRLEPEN------- 215 Query: 335 QWYGVSVDIHDLVTAQE-------AVKESERSLRQLVETLPAMIDCAAPD--GEPIYRSR 385 GVS ++ +T Q+ + E+ +++ + D A D G+ Y + Sbjct: 216 ---GVSAEVDPAMTRQDEPWMRASSFGETRNAVQAALAIEKLYGDAWAIDAIGQFTYATP 272 Query: 386 QLREFLGYNLEELDGNEKGR-----LEATLDAGVHPDDLDGVKERYAHSLASGEPYARRH 440 + + L++L+ + G+HPDD D E L +GE + + Sbjct: 273 ASQNSVARALDDLNALLDDKPFLGGGRQGWQRGIHPDDSDRAAETLRRCLRTGEHWNCEY 332 Query: 441 RLRRFDGEYRWVETRAGAMRNADGAIVQWNVICLDIDAEVRTQEELRMAQAEL 493 R R DG Y W A R+ G I W LDID RT+ LR + +L Sbjct: 333 RAARADGSYVWHRAAARPTRDEQGRITGWYGTALDIDVYKRTEAALRERERQL 385 >ref|ZP_08530971.1| two component sensor kinase [Agrobacterium sp. ATCC 31749] gb|EGL62254.1| two component sensor kinase [Agrobacterium sp. ATCC 31749] Length = 871 Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/642 (59%), Positives = 478/642 (74%), Gaps = 6/642 (0%) Query: 88 SSAKLSADAVQAMRIIESMPAYTWSASPDGHITHVSASTLSYLGELADKTGL------FH 141 SS + +AVQA IE + W+ G T+ + ++ + + D F Sbjct: 227 SSFGETRNAVQAALAIEKLYGDAWAIDAIGQFTYATPASQNSVARALDDLNALLDDKPFL 286 Query: 142 ILDNAGWRRAIHPDDYAQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQ 201 GW+R IHPDD + E R L+TG ++ EYR +DG+Y W R+ +RDEQ Sbjct: 287 GGGRQGWQRGIHPDDSDRAAETLRRCLRTGEHWNCEYRAARADGSYVWHRAAARPTRDEQ 346 Query: 202 GELAGWYGTMIDIEAKKQAEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNKRFKVA 261 G + GWYGT +DI+ K+ E ALR+ ERQLQQLID VPALIWST +G P YVN++F Sbjct: 347 GRITGWYGTALDIDVYKRTEAALRERERQLQQLIDTVPALIWSTMANGAPAYVNRQFTEV 406 Query: 262 TGASLEDITAPDGSPSLSVVHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAGGAYHWTET 321 TGA+LED+TAP+GSPSL VVHP+DRAAA A S G PY+ YRQLRAGG+Y WTET Sbjct: 407 TGATLEDMTAPNGSPSLGVVHPEDRAAAREAFLRSVEAGIPYLQRYRQLRAGGSYRWTET 466 Query: 322 RAEPLRDDAGDIIQWYGVSVDIHDLVTAQEAVKESERSLRQLVETLPAMIDCAAPDGEPI 381 RAEPLRD+ G II WYGVS DIHDL+T QEA++ESER L+QLVETLPA+I CA PDG+PI Sbjct: 467 RAEPLRDETGTIIYWYGVSSDIHDLITTQEALRESERHLQQLVETLPALIYCALPDGKPI 526 Query: 382 YRSRQLREFLGYNLEELDGNEKGRLEATLDAGVHPDDLDGVKERYAHSLASGEPYARRHR 441 YRS++LR++LG+NLE+ DG K RL+ TLDA +HPDDL VKE YA SLA+GEPY +RHR Sbjct: 527 YRSQRLRQYLGFNLEDTDGFGKSRLDGTLDAVIHPDDLAVVKEHYARSLATGEPYLQRHR 586 Query: 442 LRRFDGEYRWVETRAGAMRNADGAIVQWNVICLDIDAEVRTQEELRMAQAELAGASQAAS 501 LRRFDG YRWVETRA AMRN DG I QWN ICLDI+ +V+ QEEL A LA +SQAAS Sbjct: 587 LRRFDGVYRWVETRASAMRNGDGEIAQWNGICLDIEDQVQAQEELSRAHENLARSSQAAS 646 Query: 502 LAELSASIAHEVNQPLAAVVANSHACQRWLTADPPNLERARKTVERIIRDANGAAEVVSR 561 LAELSASIAHEVNQPL+AV+ S ACQRWLTA+PPN+ERA+KT+ERI++ AN AA+VVSR Sbjct: 647 LAELSASIAHEVNQPLSAVMNYSSACQRWLTAEPPNIERAQKTLERIVQSANSAADVVSR 706 Query: 562 IRALFRQSLDKRNSAELGSIIAEVRELMSEEAVRRRIRLDIDVESAIPPVKVDRVQIQQV 621 IRALFRQS DKR+S ELG+ + + R+L++EEA RRRIR+ ++ ES + V DRVQIQQV Sbjct: 707 IRALFRQSTDKRDSTELGAAVRQARDLLAEEAGRRRIRMTVEGESGLLLVPFDRVQIQQV 766 Query: 622 LSNLIRNGMEAMERAVGDRSIRIRLDRIEDAVRVRISDRGPGVEFPDRVFQPFFTTKESG 681 L NL+RNGM+AM +R +++R R D VR+ ++DRG GV+FPDR+F+PFFTTK+ G Sbjct: 767 LVNLLRNGMDAMASVANERVLQVRAFRAGDMVRIEVADRGRGVQFPDRIFEPFFTTKDQG 826 Query: 682 MGMGLAICRSIVESHGGHLWAEENEPHGASFIFTLPIEANRV 723 MGMGLAICRSI+E+H G LWAE+NEP G+ F+FTLP++ ++ Sbjct: 827 MGMGLAICRSIIEAHEGQLWAEKNEPIGSKFVFTLPLDIAKI 868 Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 112/361 (31%), Positives = 164/361 (45%), Gaps = 34/361 (9%) Query: 152 IHPDDYAQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGELAGWYGTM 211 +HP D A V + + G+P YR +DG+YR + + E Sbjct: 160 VHPHDRAAVEQAAARAFFHGIPQITRYRQLQADGSYRQV--------ELRLEPENGVSAE 211 Query: 212 IDIEAKKQAEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNK--RFKVATGASLEDI 269 +D +Q E +R S + +AV A + +G ++ +F AT AS + Sbjct: 212 VDPAMTRQDEPWMRAS--SFGETRNAVQAALAIEKLYGDAWAIDAIGQFTYATPASQNSV 269 Query: 270 T--------APDGSPSL--------SVVHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAG 313 D P L +HPDD A + RTGE + YR RA Sbjct: 270 ARALDDLNALLDDKPFLGGGRQGWQRGIHPDDSDRAAETLRRCLRTGEHWNCEYRAARAD 329 Query: 314 GAYHWTETRAEPLRDDAGDIIQWYGVSVDIHDLVTAQEAVKESERSLRQLVETLPAMIDC 373 G+Y W A P RD+ G I WYG ++DI + A++E ER L+QL++T+PA+I Sbjct: 330 GSYVWHRAAARPTRDEQGRITGWYGTALDIDVYKRTEAALRERERQLQQLIDTVPALIWS 389 Query: 374 AAPDGEPIYRSRQLREFLGYNLEELDG-NEKGRLEATLDAGVHPDDLDGVKERYAHSLAS 432 +G P Y +RQ E G LE++ N L VHP+D +E + S+ + Sbjct: 390 TMANGAPAYVNRQFTEVTGATLEDMTAPNGSPSLGV-----VHPEDRAAAREAFLRSVEA 444 Query: 433 GEPYARRHRLRRFDGEYRWVETRAGAMRNADGAIVQWNVICLDIDAEVRTQEELRMAQAE 492 G PY +R+R R G YRW ETRA +R+ G I+ W + DI + TQE LR ++ Sbjct: 445 GIPYLQRYRQLRAGGSYRWTETRAEPLRDETGTIIYWYGVSSDIHDLITTQEALRESERH 504 Query: 493 L 493 L Sbjct: 505 L 505 Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 113/413 (27%), Positives = 172/413 (41%), Gaps = 63/413 (15%) Query: 95 DAVQAMRIIESMPAYTWSASPDGHITHVSASTLSYLGELADKTGLFHILDNAGWRRAIHP 154 DAV+A +++E + W+A +G+ +V+ + L++ G + GW++ IHP Sbjct: 13 DAVEAAKVVERIIGNAWAADANGNFIYVTPAALAFFGISLESLNSQSGESAFGWKQVIHP 72 Query: 155 DDYAQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGELAGWYGTMIDI 214 +DY R L+TG ++ E+R+ + G Y W RS G R G + GWYGT+IDI Sbjct: 73 EDYESAAAAWRRCLRTGEHYNVEHRMLRATGVYGWARSSGQPIRGGNGVILGWYGTVIDI 132 Query: 215 EAKKQAEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNKRFKVATGASLEDITAPDG 274 AL E + R + G + DI Sbjct: 133 --------ALASRE--------------------------DNRDDPSAGRTPHDILR--- 155 Query: 275 SPSLSVVHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAGGAYHWTETRAEPLRDDAGDII 334 S+ VHP DRAA A +F G P + YRQL+A G+Y E R EP Sbjct: 156 --SMDTVHPHDRAAVEQAAARAFFHGIPQITRYRQLQADGSYRQVELRLEPEN------- 206 Query: 335 QWYGVSVDIHDLVTAQE-------AVKESERSLRQLVETLPAMIDCAAPD--GEPIYRSR 385 GVS ++ +T Q+ + E+ +++ + D A D G+ Y + Sbjct: 207 ---GVSAEVDPAMTRQDEPWMRASSFGETRNAVQAALAIEKLYGDAWAIDAIGQFTYATP 263 Query: 386 QLREFLGYNLEELDGNEKGR-----LEATLDAGVHPDDLDGVKERYAHSLASGEPYARRH 440 + + L++L+ + G+HPDD D E L +GE + + Sbjct: 264 ASQNSVARALDDLNALLDDKPFLGGGRQGWQRGIHPDDSDRAAETLRRCLRTGEHWNCEY 323 Query: 441 RLRRFDGEYRWVETRAGAMRNADGAIVQWNVICLDIDAEVRTQEELRMAQAEL 493 R R DG Y W A R+ G I W LDID RT+ LR + +L Sbjct: 324 RAARADGSYVWHRAAARPTRDEQGRITGWYGTALDIDVYKRTEAALRERERQL 376 >ref|YP_002823887.1| two component sensor-kinase [Sinorhizobium fredii NGR234] gb|AAQ87185.1| Sensory Transduction Protein Kinase [Sinorhizobium fredii NGR234] gb|ACP23134.1| two component sensor-kinase [Sinorhizobium fredii NGR234] Length = 1333 Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/629 (58%), Positives = 462/629 (73%), Gaps = 11/629 (1%) Query: 101 RIIESMPAYTWSASPDGHITHVSASTLSYLGELA---DKTGLFHILDNAGWRRAIHPDDY 157 ++++ +P + +P+G + + + G DK G + A + IHP+D Sbjct: 705 QLVDMVPVHIRRLTPEGEPIFFNKRLIDFFGLDVGDMDKPGTSRL--TAVIQTLIHPNDA 762 Query: 158 AQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGELAGWYGTMIDIEAK 217 ++E R SL TG PF +YR+R +DG YRW RD+ G +A WY +D++ + Sbjct: 763 TGLLETVRRSLVTGDPFSMKYRMRRADGVYRWVDGRAEPLRDQSGAIAQWYVISVDVDDE 822 Query: 218 KQAEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNKRFKVATGASLEDITAPDGSPS 277 +A++ALR ER+L QL+D VP+L+W +P G PT++N+R G L D+ P G Sbjct: 823 MRAQEALRDRERELSQLVDMVPSLLWRLSPEGEPTFLNRRVINFLGLDLADLEKP-GVSR 881 Query: 278 L-----SVVHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAGGAYHWTETRAEPLRDDAGD 332 L + VHPDD A A+ HSF TGE + R RA G Y W + A+PLRD++G Sbjct: 882 LEAFMEAAVHPDDAADLWGALNHSFVTGERFSKQCRLRRADGVYRWVQASADPLRDESGR 941 Query: 333 IIQWYGVSVDIHDLVTAQEAVKESERSLRQLVETLPAMIDCAAPDGEPIYRSRQLREFLG 392 I+QWYG+S DI D + +EA++E ERSL Q+VETLPAMIDCAAPDGEP+YR+ QLR+FLG Sbjct: 942 IVQWYGLSHDIDDQLRVEEALRERERSLWQIVETLPAMIDCAAPDGEPVYRNPQLRDFLG 1001 Query: 393 YNLEELDGNEKGRLEATLDAGVHPDDLDGVKERYAHSLASGEPYARRHRLRRFDGEYRWV 452 Y LEELDG K RLE TLDAGVHPD++DGVKE YAHSL +GEPYARRHRLRRFDGEYRWV Sbjct: 1002 YKLEELDGTGKSRLEGTLDAGVHPDEVDGVKENYAHSLTTGEPYARRHRLRRFDGEYRWV 1061 Query: 453 ETRAGAMRNADGAIVQWNVICLDIDAEVRTQEELRMAQAELAGASQAASLAELSASIAHE 512 ETRA MRN +G IVQWNVICLDID EVR +E+LR+AQ LA ASQAASL+ELSASIAHE Sbjct: 1062 ETRAAPMRNTEGTIVQWNVICLDIDGEVRAEEKLRLAQESLARASQAASLSELSASIAHE 1121 Query: 513 VNQPLAAVVANSHACQRWLTADPPNLERARKTVERIIRDANGAAEVVSRIRALFRQSLDK 572 VNQPLAAVVANSHACQRWLTA+PPNL+RA++TVERI+RDAN AA+VVSRIRALF+QS+ Sbjct: 1122 VNQPLAAVVANSHACQRWLTAEPPNLQRAQRTVERIVRDANSAADVVSRIRALFKQSIGT 1181 Query: 573 RNSAELGSIIAEVRELMSEEAVRRRIRLDIDVESAIPPVKVDRVQIQQVLSNLIRNGMEA 632 R +A L S+I+EVR L+++EA RRR+R+D+ ++ +PP+ +D +QIQQVL NLIRNGMEA Sbjct: 1182 RINAALASVISEVRNLLADEAARRRVRIDLKIDGDLPPIAIDHIQIQQVLINLIRNGMEA 1241 Query: 633 MERAVGDRSIRIRLDRIEDAVRVRISDRGPGVEFPDRVFQPFFTTKESGMGMGLAICRSI 692 M GDR + +R I D V+ ISD GPG+EFPDRVF+PFFTTK+ GMGMGLAICRSI Sbjct: 1242 MGSLAGDRVLGMRASYIGDVVQTEISDLGPGIEFPDRVFEPFFTTKKDGMGMGLAICRSI 1301 Query: 693 VESHGGHLWAEENEPHGASFIFTLPIEAN 721 VE HGG LWAE+NEPHGA FIFTLP+EA Sbjct: 1302 VELHGGRLWAEKNEPHGAKFIFTLPVEAK 1330 Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 179/452 (39%), Positives = 254/452 (56%), Gaps = 24/452 (5%) Query: 60 AHDPQS---AALSLALF-AVLALCIGEIVAIPSSAKLSADAV-----QAMRIIESMPAYT 110 A DP+S + L LF A+ AL + AI +L+ V Q ++I+++PA Sbjct: 260 AGDPESQRQKHIMLQLFLAISALSALIVAAISRQHQLALLTVRRSERQLQQLIDAVPALI 319 Query: 111 WSASPDGHITHVSASTLSYLGELADKTG--LFHILDNAGWRR--AIHPDDYAQVMEIRRH 166 W +P+G +++ + D TG L ++ G R +HPDD + E Sbjct: 320 WCTTPEGIPCYLNK-------RVTDVTGVTLEDLIAPDGSRSLSVVHPDDRIAMDEAFAR 372 Query: 167 SLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGELAGWYGTMIDIEAKKQAEDALRK 226 S +TG PF YR R ++G +RW S RDE G + WYG +DIE +A++ALR Sbjct: 373 SFETGEPFLWRYRQRRANGPHRWVESRAEPLRDESGAIVQWYGVSVDIEDMMKAQEALRD 432 Query: 227 SERQLQQLIDAVPALIWSTTPHGTPTYVNKRFKVATGASLED----ITAPDGSPSLSVVH 282 ER+L QL+D VP IW G PT+ NKR G+ + D P + +VVH Sbjct: 433 RERELSQLVDMVPIPIWRLASDGEPTFFNKRLIDFLGSDVADYDTATMTPLAAAIAAVVH 492 Query: 283 PDDRAAAIAAITHSFRTGEPYVMIYRQLRAGGAYHWTETRAEPLRDDAGDIIQWYGVSVD 342 PDD A A+ HS TGE + M YR RA G Y W E RAEP+RD++G I+QWYG+S D Sbjct: 493 PDDAARMGNALNHSLVTGERFFMRYRLRRADGVYRWVEGRAEPMRDESGRIVQWYGLSHD 552 Query: 343 IHDLVTAQEAVKESERSLRQLVETLPAMIDCAAPDGEPIYRSRQLREFLGYNLEELDGNE 402 I D + A+EA+++SER L LV+ +P I C P GEP + +++L +FLG ++ ++D Sbjct: 553 IDDQLRAEEALRKSERQLALLVDVVPVAIACLTPGGEPNFFNKRLSDFLGLDVADVDKPG 612 Query: 403 KGRLEATLDAGVHPDDLDGVKERYAHSLASGEPYARRHRLRRFDGEYRWVETRAGAMRNA 462 RL A + A VHPDD + + L +GE ++R++RLRR DG YRW+E RA +R+ Sbjct: 613 VTRLAAAIAAAVHPDDATEFGDELSRCLVTGESFSRKYRLRRADGVYRWMEGRAEPLRDH 672 Query: 463 DGAIVQWNVICLDIDAEVRTQEELRMAQAELA 494 GAI QW + +DID EVR QE LR + EL+ Sbjct: 673 GGAIFQWYAVAIDIDDEVRAQEALRDRERELS 704 Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 159/399 (39%), Positives = 225/399 (56%), Gaps = 5/399 (1%) Query: 101 RIIESMPAYTWSASPDGHITHVSASTLSYLG-ELADKTGLFHILDNAGWRRAIHPDDYAQ 159 ++++ +P W + DG T + + +LG ++AD A +HPDD A+ Sbjct: 439 QLVDMVPIPIWRLASDGEPTFFNKRLIDFLGSDVADYDTATMTPLAAAIAAVVHPDDAAR 498 Query: 160 VMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGELAGWYGTMIDIEAKKQ 219 + HSL TG F YR+R +DG YRW RDE G + WYG DI+ + + Sbjct: 499 MGNALNHSLVTGERFFMRYRLRRADGVYRWVEGRAEPMRDESGRIVQWYGLSHDIDDQLR 558 Query: 220 AEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNKRFKVATGASLEDITAPDGS---- 275 AE+ALRKSERQL L+D VP I TP G P + NKR G + D+ P + Sbjct: 559 AEEALRKSERQLALLVDVVPVAIACLTPGGEPNFFNKRLSDFLGLDVADVDKPGVTRLAA 618 Query: 276 PSLSVVHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAGGAYHWTETRAEPLRDDAGDIIQ 335 + VHPDD ++ TGE + YR RA G Y W E RAEPLRD G I Q Sbjct: 619 AIAAAVHPDDATEFGDELSRCLVTGESFSRKYRLRRADGVYRWMEGRAEPLRDHGGAIFQ 678 Query: 336 WYGVSVDIHDLVTAQEAVKESERSLRQLVETLPAMIDCAAPDGEPIYRSRQLREFLGYNL 395 WY V++DI D V AQEA+++ ER L QLV+ +P I P+GEPI+ +++L +F G ++ Sbjct: 679 WYAVAIDIDDEVRAQEALRDRERELSQLVDMVPVHIRRLTPEGEPIFFNKRLIDFFGLDV 738 Query: 396 EELDGNEKGRLEATLDAGVHPDDLDGVKERYAHSLASGEPYARRHRLRRFDGEYRWVETR 455 ++D RL A + +HP+D G+ E SL +G+P++ ++R+RR DG YRWV+ R Sbjct: 739 GDMDKPGTSRLTAVIQTLIHPNDATGLLETVRRSLVTGDPFSMKYRMRRADGVYRWVDGR 798 Query: 456 AGAMRNADGAIVQWNVICLDIDAEVRTQEELRMAQAELA 494 A +R+ GAI QW VI +D+D E+R QE LR + EL+ Sbjct: 799 AEPLRDQSGAIAQWYVISVDVDDEMRAQEALRDRERELS 837 >ref|YP_004614078.1| PAS/PAC sensor signal transduction histidine kinase [Mesorhizobium opportunistum WSM2075] gb|AEH89984.1| PAS/PAC sensor signal transduction histidine kinase [Mesorhizobium opportunistum WSM2075] Length = 1265 Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/625 (59%), Positives = 451/625 (72%), Gaps = 11/625 (1%) Query: 98 QAMRIIESMPAYTWSASPDGHITHVSASTLSYLGELADKTGLFHILDNAGWRRAIHPDDY 157 Q ++I+++P S +P G IT+ S L +G F L R HP+D+ Sbjct: 644 QLEQMIDAVPVNLLSFAPSGRITYTSKRYLEKVGSPPTHINDFDALA----RDLAHPEDF 699 Query: 158 AQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGELAGWYGTMIDIEAK 217 + + +G PF +R R DG YRW + RD G + WY IDIE + Sbjct: 700 PTMFRRASNGFASGQPFVNRFRRREKDGVYRWIEARAQPLRDTDGAIVQWYMASIDIEDE 759 Query: 218 KQAEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNKRFKVA---TGASLEDITAPDG 274 +A++ALR+ ER+LQQL+DA+P IWS TP G YVN+R +GA+ ED T Sbjct: 760 MRAQEALRERERELQQLVDALPVHIWSWTPDGKLAYVNRRSLEELGISGANFEDFT---- 815 Query: 275 SPSLSVVHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAGGAYHWTETRAEPLRDDAGDII 334 + ++HP+D + +TG+ ++M YR+ G+Y W E R EPLRD G I+ Sbjct: 816 RVARDLIHPEDALEVLNRSASCLKTGDSFIMRYRRRWKDGSYRWIEGRCEPLRDRDGAIV 875 Query: 335 QWYGVSVDIHDLVTAQEAVKESERSLRQLVETLPAMIDCAAPDGEPIYRSRQLREFLGYN 394 WY VS+DI + + AQ A++E ERSL QLVETLP MIDCAAP+GEPIYRSRQLREFLGY Sbjct: 876 HWYQVSIDIDEEMRAQVALRERERSLWQLVETLPVMIDCAAPNGEPIYRSRQLREFLGYE 935 Query: 395 LEELDGNEKGRLEATLDAGVHPDDLDGVKERYAHSLASGEPYARRHRLRRFDGEYRWVET 454 LE LDG K RL TLD GVHPDDL VK YAHSLA+GEPYARRHRLRRFDGEY WV+T Sbjct: 936 LELLDGKGKSRLSGTLDEGVHPDDLAAVKANYAHSLATGEPYARRHRLRRFDGEYCWVDT 995 Query: 455 RAGAMRNADGAIVQWNVICLDIDAEVRTQEELRMAQAELAGASQAASLAELSASIAHEVN 514 RA MRNA+GAIVQWNV+CLDID EVR QEELR+AQ LA ASQAASLAELSASIAHEVN Sbjct: 996 RAAPMRNAEGAIVQWNVVCLDIDGEVRAQEELRLAQERLARASQAASLAELSASIAHEVN 1055 Query: 515 QPLAAVVANSHACQRWLTADPPNLERARKTVERIIRDANGAAEVVSRIRALFRQSLDKRN 574 QPLAAVVANS+ACQRWLTA+PPN+ERA+KTVERIIRDAN AA+VVSRIRALF+QS D Sbjct: 1056 QPLAAVVANSYACQRWLTAEPPNIERAQKTVERIIRDANSAADVVSRIRALFKQSADAMA 1115 Query: 575 SAELGSIIAEVRELMSEEAVRRRIRLDIDVESAIPPVKVDRVQIQQVLSNLIRNGMEAME 634 L S+IAE R+L++EEAVRRR+RLD+DVES +P V +DRVQIQQVL NLIRNG+EAM+ Sbjct: 1116 YTALDSVIAEARDLIAEEAVRRRVRLDLDVESDLPIVALDRVQIQQVLVNLIRNGIEAMD 1175 Query: 635 RAVGDRSIRIRLDRIEDAVRVRISDRGPGVEFPDRVFQPFFTTKESGMGMGLAICRSIVE 694 GD+ + +R+ RI DA+++ ISD GPG+ FPDR+F+PFFTTKE GMGMGLAICRSIVE Sbjct: 1176 SVPGDKVLGLRVRRIGDAIQIEISDCGPGIAFPDRIFEPFFTTKEHGMGMGLAICRSIVE 1235 Query: 695 SHGGHLWAEENEPHGASFIFTLPIE 719 SHGG LW E+N+PHG +F+FT+P+E Sbjct: 1236 SHGGRLWVEKNDPHGTAFVFTMPVE 1260 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 160/418 (38%), Positives = 234/418 (55%), Gaps = 5/418 (1%) Query: 94 ADAVQAMRIIESMPAYTWSASPDGHITHVSASTLSYLGELADKTGLFHILDNAGWRRAIH 153 A +++ +I+ES+ W+ G ++ LS LG + W+R +H Sbjct: 241 AGPIRSAKIVESIFGNGWAFDAAGRWIYMHPFALSSLGVTLEDLNAPLNEGYTAWKRLLH 300 Query: 154 PDDYAQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGELAGWYGTMID 213 PDDY Q+ RH L+TG F+ E+R R ++GTY W R+ +RD QG + GWYG +D Sbjct: 301 PDDYEQIAVTWRHCLRTGDHFNVEFRFRRANGTYVWARTAARPARDSQGRITGWYGIALD 360 Query: 214 IEAKKQAEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNKRFKVATGA-SLEDITAP 272 + K+ LR ER+L QLID VP I TP G PT+ N+R G + D+ P Sbjct: 361 NDVYKKTVAELRGRERELSQLIDMVPVQIRRLTPEGEPTFFNRRLLDFFGLDGVADLDKP 420 Query: 273 DGSPSL----SVVHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAGGAYHWTETRAEPLRD 328 S S+V+P+D A + + HS TGEPY M YR RA GAY W + R EPLRD Sbjct: 421 GMSRQAAAIQSLVYPEDAARLLETVRHSLATGEPYSMKYRMRRADGAYRWVDGRGEPLRD 480 Query: 329 DAGDIIQWYGVSVDIHDLVTAQEAVKESERSLRQLVETLPAMIDCAAPDGEPIYRSRQLR 388 +G I+QWY +S+D+ D + AQEA++E ER L QLV+ +P+ + + GEP++ S+++ Sbjct: 481 HSGAIVQWYVISIDVDDEMRAQEALRERERELSQLVDMVPSFLWRLSASGEPVFFSKRMV 540 Query: 389 EFLGYNLEELDGNEKGRLEATLDAGVHPDDLDGVKERYAHSLASGEPYARRHRLRRFDGE 448 E+LG ++ + L A + A VHPDD ++ HS+ +GE ++ +RLRR DG Sbjct: 541 EYLGLDVGGYENVGGNGLTAAIAAVVHPDDAATLEAAINHSVTTGESFSLNYRLRRADGV 600 Query: 449 YRWVETRAGAMRNADGAIVQWNVICLDIDAEVRTQEELRMAQAELAGASQAASLAELS 506 +RW+ RA MR+ G +VQW + DID +VR +E LR A +L A + LS Sbjct: 601 FRWMSGRAEPMRDECGTVVQWYGLSHDIDDQVRAEEALRKANRQLEQMIDAVPVNLLS 658 Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 148/412 (35%), Positives = 229/412 (55%), Gaps = 15/412 (3%) Query: 90 AKLSADAVQAMRIIESMPAYTWSASPDGHITHVSASTLSYLGELA----DKTGLFHILDN 145 A+L + ++I+ +P +P+G T + L + G DK G+ Sbjct: 369 AELRGRERELSQLIDMVPVQIRRLTPEGEPTFFNRRLLDFFGLDGVADLDKPGMSR--QA 426 Query: 146 AGWRRAIHPDDYAQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGELA 205 A + ++P+D A+++E RHSL TG P+ +YR+R +DG YRW G RD G + Sbjct: 427 AAIQSLVYPEDAARLLETVRHSLATGEPYSMKYRMRRADGAYRWVDGRGEPLRDHSGAIV 486 Query: 206 GWYGTMIDIEAKKQAEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNKRFKVATG-- 263 WY ID++ + +A++ALR+ ER+L QL+D VP+ +W + G P + +KR G Sbjct: 487 QWYVISIDVDDEMRAQEALRERERELSQLVDMVPSFLWRLSASGEPVFFSKRMVEYLGLD 546 Query: 264 -ASLEDITAPDGSPSLS-VVHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAGGAYHWTET 321 E++ + +++ VVHPDD A AAI HS TGE + + YR RA G + W Sbjct: 547 VGGYENVGGNGLTAAIAAVVHPDDAATLEAAINHSVTTGESFSLNYRLRRADGVFRWMSG 606 Query: 322 RAEPLRDDAGDIIQWYGVSVDIHDLVTAQEAVKESERSLRQLVETLPAMIDCAAPDGEPI 381 RAEP+RD+ G ++QWYG+S DI D V A+EA++++ R L Q+++ +P + AP G Sbjct: 607 RAEPMRDECGTVVQWYGLSHDIDDQVRAEEALRKANRQLEQMIDAVPVNLLSFAPSGRIT 666 Query: 382 YRSRQLREFLGYNLEELDGNEKGRLEATLDAGVHPDDLDGVKERYAHSLASGEPYARRHR 441 Y S++ E +G ++ +A HP+D + R ++ ASG+P+ R R Sbjct: 667 YTSKRYLEKVGSPPTHIND-----FDALARDLAHPEDFPTMFRRASNGFASGQPFVNRFR 721 Query: 442 LRRFDGEYRWVETRAGAMRNADGAIVQWNVICLDIDAEVRTQEELRMAQAEL 493 R DG YRW+E RA +R+ DGAIVQW + +DI+ E+R QE LR + EL Sbjct: 722 RREKDGVYRWIEARAQPLRDTDGAIVQWYMASIDIEDEMRAQEALREREREL 773 Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 135/428 (31%), Positives = 205/428 (47%), Gaps = 46/428 (10%) Query: 101 RIIESMPAYTWSASPDGHITHVSASTLSYLGELADKTG-------LFHILDNAGWRRA-- 151 RI+ + AY WS S + + +++ G L + ++ A + A Sbjct: 98 RILRASGAYGWSRSSGQPLCDSEGNAVAWYGTLIEGDAPPAATERFADVMSEALEKEAAS 157 Query: 152 --------IHPDDYAQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGE 203 +HPDD + TG+P +R +DG+YRW + +R E G Sbjct: 158 DALHSLSLVHPDDRTAAAHAAARAFWTGVPQVTRHRQLQTDGSYRW-----NETRSEPG- 211 Query: 204 LAGWYGTMIDIEAKKQAEDALRKSERQLQQLI--DAVP---ALI--------WSTTPHGT 250 Y +DI+ D R S L L+ DA P A I W+ G Sbjct: 212 ----YSVSVDID--DLVTDRERLSGTDLDPLVENDAGPIRSAKIVESIFGNGWAFDAAGR 265 Query: 251 PTYVNKRFKVATGASLEDITAP--DGSPSLS-VVHPDDRAAAIAAITHSFRTGEPYVMIY 307 Y++ + G +LED+ AP +G + ++HPDD H RTG+ + + + Sbjct: 266 WIYMHPFALSSLGVTLEDLNAPLNEGYTAWKRLLHPDDYEQIAVTWRHCLRTGDHFNVEF 325 Query: 308 RQLRAGGAYHWTETRAEPLRDDAGDIIQWYGVSVDIHDLVTAQEAVKESERSLRQLVETL 367 R RA G Y W T A P RD G I WYG+++D ++ ER L QL++ + Sbjct: 326 RFRRANGTYVWARTAARPARDSQGRITGWYGIALDNDVYKKTVAELRGRERELSQLIDMV 385 Query: 368 PAMIDCAAPDGEPIYRSRQLREFLGYN-LEELDGNEKGRLEATLDAGVHPDDLDGVKERY 426 P I P+GEP + +R+L +F G + + +LD R A + + V+P+D + E Sbjct: 386 PVQIRRLTPEGEPTFFNRRLLDFFGLDGVADLDKPGMSRQAAAIQSLVYPEDAARLLETV 445 Query: 427 AHSLASGEPYARRHRLRRFDGEYRWVETRAGAMRNADGAIVQWNVICLDIDAEVRTQEEL 486 HSLA+GEPY+ ++R+RR DG YRWV+ R +R+ GAIVQW VI +D+D E+R QE L Sbjct: 446 RHSLATGEPYSMKYRMRRADGAYRWVDGRGEPLRDHSGAIVQWYVISIDVDDEMRAQEAL 505 Query: 487 RMAQAELA 494 R + EL+ Sbjct: 506 RERERELS 513 Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 140/431 (32%), Positives = 193/431 (44%), Gaps = 74/431 (17%) Query: 84 VAIPSSAKLSADAVQAMRIIESMPAYTWSASPDGHITHVSASTLSYLGELADKTGLFHIL 143 A S A+A++A R+IES+ W+ G ++V+ STLS LG ++ Sbjct: 3 TAFNSLGDPDAEALRAARLIESVVGNGWATDAAGRFSYVTPSTLSLLGTTLEEFNTSSED 62 Query: 144 DNAGWRRAIHPDDYAQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGE 203 +AGW+R IHPDDY + + R L+TG ++ E+R+ + G Y W RS G D +G Sbjct: 63 GSAGWKRLIHPDDYDRAVAEWRRCLQTGEHYNVEHRILRASGAYGWSRSSGQPLCDSEGN 122 Query: 204 LAGWYGTMIDIEAKKQAEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNKRFKVATG 263 WYGT+I+ +A P +RF Sbjct: 123 AVAWYGTLIEGDA----------------------------------PPAATERFADVMS 148 Query: 264 ASLEDITAPDGSPSLSVVHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAGGAYHWTETRA 323 +LE A D SLS+VHPDDR AA A +F TG P V +RQL+ G+Y W ETR+ Sbjct: 149 EALEKEAASDALHSLSLVHPDDRTAAAHAAARAFWTGVPQVTRHRQLQTDGSYRWNETRS 208 Query: 324 EPLRDDAGDIIQWYGVSVDIHDLVTAQEAVKESERSLRQLVETLPAMIDCAA-------- 375 EP Y VSVDI DLVT +E + ++ L LVE I A Sbjct: 209 EPG----------YSVSVDIDDLVTDRERLSGTD--LDPLVENDAGPIRSAKIVESIFGN 256 Query: 376 -----PDGEPIYRSRQLREFLGYNLEELDGNEKGRLEATLDAG-------VHPDDLDGVK 423 G IY LG LE+L+ A L+ G +HPDD + + Sbjct: 257 GWAFDAAGRWIYMHPFALSSLGVTLEDLN--------APLNEGYTAWKRLLHPDDYEQIA 308 Query: 424 ERYAHSLASGEPYARRHRLRRFDGEYRWVETRAGAMRNADGAIVQWNVICLDIDAEVRTQ 483 + H L +G+ + R RR +G Y W T A R++ G I W I LD D +T Sbjct: 309 VTWRHCLRTGDHFNVEFRFRRANGTYVWARTAARPARDSQGRITGWYGIALDNDVYKKTV 368 Query: 484 EELRMAQAELA 494 ELR + EL+ Sbjct: 369 AELRGRERELS 379 >ref|YP_002973360.1| PAS/PAC sensor signal transduction histidine kinase [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS59399.1| PAS/PAC sensor signal transduction histidine kinase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 1211 Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/628 (56%), Positives = 456/628 (72%), Gaps = 9/628 (1%) Query: 101 RIIESMPAYTWSASPDGHITHVSASTLSYLGELA---DKTGLFHILDNAGWRRAIHPDDY 157 ++++ +P +P G + + + G DK G+ + ++ +HPDD Sbjct: 583 QLVDMVPVQIRRLTPGGEPVFFNKRLIDFFGLDVGDMDKPGMSRL--SSVIHTLVHPDDA 640 Query: 158 AQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGELAGWYGTMIDIEAK 217 ++++E HSL +G PF +YR+ DG YRW RD+ G + WY +DI+ + Sbjct: 641 SRLLETVHHSLASGDPFSIKYRMLRFDGAYRWVDGRAEPLRDQSGAIMQWYVISVDIDDE 700 Query: 218 KQAEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNKRFKVATGASLEDITAPDGSPS 277 +A++ALR ER+L QL+D VP+L+W P G PT+ N+R G + D P S Sbjct: 701 MRAQEALRDRERELSQLVDMVPSLLWRLNPEGAPTFFNQRLIDFLGLDIVDTEKPGVSRL 760 Query: 278 LSV----VHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAGGAYHWTETRAEPLRDDAGDI 333 ++ VHPDD A A+ HSF TGE + YR RA G Y W + AEPLRD +G I Sbjct: 761 AALIEAAVHPDDAAGLERALNHSFATGERFSSQYRLRRADGVYRWVKGSAEPLRDQSGRI 820 Query: 334 IQWYGVSVDIHDLVTAQEAVKESERSLRQLVETLPAMIDCAAPDGEPIYRSRQLREFLGY 393 +QWYG+S DI D + +EA++E ERSL QLVETLPAMIDCAAPDGEPIYRS+QLR+FLGY Sbjct: 821 VQWYGLSHDIDDQLRVEEALRERERSLWQLVETLPAMIDCAAPDGEPIYRSQQLRDFLGY 880 Query: 394 NLEELDGNEKGRLEATLDAGVHPDDLDGVKERYAHSLASGEPYARRHRLRRFDGEYRWVE 453 NL+ELDG K RLE TLDAGVHPDD+ GVKE Y+HSL+SGEPYARRHRLRR DGEYRWVE Sbjct: 881 NLDELDGTGKTRLEGTLDAGVHPDDVAGVKENYSHSLSSGEPYARRHRLRRHDGEYRWVE 940 Query: 454 TRAGAMRNADGAIVQWNVICLDIDAEVRTQEELRMAQAELAGASQAASLAELSASIAHEV 513 TRA MRNA+G IVQWNVICLDID +V +E+LR A+ LA ASQ ASLAELSASIAHEV Sbjct: 941 TRAAPMRNAEGVIVQWNVICLDIDGQVHAEEDLRRAREGLARASQVASLAELSASIAHEV 1000 Query: 514 NQPLAAVVANSHACQRWLTADPPNLERARKTVERIIRDANGAAEVVSRIRALFRQSLDKR 573 NQPLAAVVANSHACQRWL A+PPN+ERA++TVERIIRDAN AA+VVSRIRALF+QS+D+R Sbjct: 1001 NQPLAAVVANSHACQRWLMAEPPNMERAQRTVERIIRDANSAADVVSRIRALFKQSVDRR 1060 Query: 574 NSAELGSIIAEVRELMSEEAVRRRIRLDIDVESAIPPVKVDRVQIQQVLSNLIRNGMEAM 633 + L I+ EVR LM++EA RR +R++++++ +P + +DRVQIQQVL NLIRNG+EAM Sbjct: 1061 IPSTLSGIVNEVRNLMADEAWRRHVRMEVELDDTLPLIAIDRVQIQQVLINLIRNGIEAM 1120 Query: 634 ERAVGDRSIRIRLDRIEDAVRVRISDRGPGVEFPDRVFQPFFTTKESGMGMGLAICRSIV 693 + GDR + IR+ +I + ++ ISDRG G++FP+++F+PFFTTKE+GMGMGLAICRSIV Sbjct: 1121 DATTGDRVVEIRVRQIGNILQTEISDRGQGIDFPEKMFEPFFTTKENGMGMGLAICRSIV 1180 Query: 694 ESHGGHLWAEENEPHGASFIFTLPIEAN 721 E HGG LWAE+N PHGA+ +FTLPIE Sbjct: 1181 ELHGGRLWAEKNNPHGATLLFTLPIETK 1208 Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 161/401 (40%), Positives = 237/401 (59%), Gaps = 9/401 (2%) Query: 101 RIIESMPAYTWSASPDGHITHVSASTLSYLG---ELADKTGLFHILDNAGWRRAIHPDDY 157 ++++ +P++ W +P+G T + + +LG +D+ G+ + A + +HPDD Sbjct: 317 QLVDMVPSHVWRLTPEGEPTFFNRRMVDFLGLDVADSDRPGMSRL--EAVLQATVHPDDT 374 Query: 158 AQVMEIRRHSLKTGLPFDAEYRVRGSDGTYRWFRSFGSLSRDEQGELAGWYGTMIDIEAK 217 A + RH L TG F YR+R +DG YRW S RD+ G WYG DI+ + Sbjct: 375 AGFRDALRHCLATGESFVMRYRLRRADGLYRWMSSRAEPMRDQAGNTVQWYGLCHDIDDQ 434 Query: 218 KQAEDALRKSERQLQQLIDAVPALIWSTTPHGTPTYVNKRFK---VATGASLEDITAPDG 274 +AE+A+R+SERQLQQ+IDAVP IWS P G TY NKR++ A A+ + P Sbjct: 435 MRAEEAVRRSERQLQQMIDAVPVRIWSVEPTGGSTYFNKRYQDHFRAVIANFDSQAEPRI 494 Query: 275 SPSLS-VVHPDDRAAAIAAITHSFRTGEPYVMIYRQLRAGGAYHWTETRAEPLRDDAGDI 333 L ++HP+D +A + + F G M +R L G Y W E R EP RDD G + Sbjct: 495 DELLQQLIHPEDASAVQRTLRNCFEAGSGSAMRFRWLEKDGVYRWAECRVEPRRDDDGTV 554 Query: 334 IQWYGVSVDIHDLVTAQEAVKESERSLRQLVETLPAMIDCAAPDGEPIYRSRQLREFLGY 393 +QWYGVS+DI + V A EA+++ ER L QLV+ +P I P GEP++ +++L +F G Sbjct: 555 VQWYGVSLDIDEEVRALEALRDRERELSQLVDMVPVQIRRLTPGGEPVFFNKRLIDFFGL 614 Query: 394 NLEELDGNEKGRLEATLDAGVHPDDLDGVKERYAHSLASGEPYARRHRLRRFDGEYRWVE 453 ++ ++D RL + + VHPDD + E HSLASG+P++ ++R+ RFDG YRWV+ Sbjct: 615 DVGDMDKPGMSRLSSVIHTLVHPDDASRLLETVHHSLASGDPFSIKYRMLRFDGAYRWVD 674 Query: 454 TRAGAMRNADGAIVQWNVICLDIDAEVRTQEELRMAQAELA 494 RA +R+ GAI+QW VI +DID E+R QE LR + EL+ Sbjct: 675 GRAEPLRDQSGAIMQWYVISVDIDDEMRAQEALRDRERELS 715