BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0041.0069.p         (128 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_03520419.1| putative two-component response regulator pro...   155   3e-36
ref|ZP_03503816.1| putative two-component response regulator pro...   155   3e-36
ref|YP_001413626.1| response regulator receiver protein [Parviba...   154   4e-36
ref|ZP_04683156.1| two-component response regulator ARR21 [Ochro...   154   4e-36
ref|YP_002973358.1| response regulator receiver protein [Rhizobi...   148   2e-34

>ref|ZP_03520419.1| putative two-component response regulator protein [Rhizobium etli
           GR56]
          Length = 125

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 74/114 (64%), Positives = 93/114 (81%)

Query: 6   RVVAVVDDDPRLVESLAELLESAGYQTCCFSSAQALLAAGFANMDVLITDVGIPGVDGFE 65
            VVA+VDDDPRL+ES+ +LLESAGY    F SA +LL +G +++D+LITD+G+PG+DGFE
Sbjct: 6   HVVAIVDDDPRLLESMGDLLESAGYVARGFPSAGSLLVSGLSDLDLLITDIGMPGIDGFE 65

Query: 66  LRRRALKQRPDLPVFLISGRHEVADQSRAQGLSGFFRKPFDGRALLAAVDDALR 119
           LR    K RP+LPVFLI+GRHE+ADQ RAQG  GFFRKPFD +ALL A+ +ALR
Sbjct: 66  LRDLVRKSRPELPVFLITGRHEIADQGRAQGGGGFFRKPFDAQALLTAIANALR 119


>ref|ZP_03503816.1| putative two-component response regulator protein [Rhizobium etli
           Kim 5]
          Length = 125

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 74/114 (64%), Positives = 93/114 (81%)

Query: 6   RVVAVVDDDPRLVESLAELLESAGYQTCCFSSAQALLAAGFANMDVLITDVGIPGVDGFE 65
            VVAVVDDDPRL+ES+ +LLESAGY    F SA +LL +G +++DVLITD+G+PG+DGF+
Sbjct: 6   HVVAVVDDDPRLLESMGDLLESAGYVARGFPSAGSLLVSGLSDLDVLITDIGVPGIDGFK 65

Query: 66  LRRRALKQRPDLPVFLISGRHEVADQSRAQGLSGFFRKPFDGRALLAAVDDALR 119
           LR    K RP+LPVFLI+GRHE+ADQ RAQG  GFFRKPFD +ALL A+ +AL+
Sbjct: 66  LRDLIRKSRPELPVFLITGRHEIADQGRAQGTGGFFRKPFDAQALLTAIANALQ 119


>ref|YP_001413626.1| response regulator receiver protein [Parvibaculum lavamentivorans
           DS-1]
 gb|ABS63969.1| response regulator receiver protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 129

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 73/118 (61%), Positives = 90/118 (76%)

Query: 1   VSKGGRVVAVVDDDPRLVESLAELLESAGYQTCCFSSAQALLAAGFANMDVLITDVGIPG 60
           + K    VA+VDDDPRL+ES+  LLESAGY    FSSA+A + +G +NMDVLITD+G+PG
Sbjct: 1   MKKANPSVAIVDDDPRLLESMENLLESAGYVPHSFSSAEAFIVSGLSNMDVLITDIGMPG 60

Query: 61  VDGFELRRRALKQRPDLPVFLISGRHEVADQSRAQGLSGFFRKPFDGRALLAAVDDAL 118
           ++GFELR    + RP+LPVFLI+GRHE  +Q R  G SGFFRKPFD RALLAAV+  L
Sbjct: 61  MNGFELRDLMKRTRPELPVFLITGRHENVEQGRTMGASGFFRKPFDARALLAAVERVL 118


>ref|ZP_04683156.1| two-component response regulator ARR21 [Ochrobactrum intermedium
           LMG 3301]
 gb|EEQ94460.1| two-component response regulator ARR21 [Ochrobactrum intermedium
           LMG 3301]
          Length = 126

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 71/112 (63%), Positives = 90/112 (80%)

Query: 7   VVAVVDDDPRLVESLAELLESAGYQTCCFSSAQALLAAGFANMDVLITDVGIPGVDGFEL 66
           V+AVVDDD RL+ES+ +LLE+ GY   C+SSA +LL  G A +D++ITDVG+P +DGFEL
Sbjct: 8   VIAVVDDDSRLLESMEDLLEATGYTARCYSSAASLLTRGLAGVDLIITDVGMPDIDGFEL 67

Query: 67  RRRALKQRPDLPVFLISGRHEVADQSRAQGLSGFFRKPFDGRALLAAVDDAL 118
           R    +  PDLPVFLI+GRHE+ADQ RAQG++GFFRKPFDG+ LL A+ DAL
Sbjct: 68  REIVQEIHPDLPVFLITGRHEIADQERAQGVTGFFRKPFDGQTLLTAISDAL 119


>ref|YP_002973358.1| response regulator receiver protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gb|ACS59397.1| response regulator receiver protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 125

 Score =  148 bits (374), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/106 (65%), Positives = 87/106 (82%)

Query: 1   VSKGGRVVAVVDDDPRLVESLAELLESAGYQTCCFSSAQALLAAGFANMDVLITDVGIPG 60
           ++K   VVA+VDDDPRL+ES+ +LLESAGY    FSSA +LL  G +++D+LITD+G+PG
Sbjct: 1   MNKTRHVVAIVDDDPRLLESMGDLLESAGYVARSFSSAGSLLVNGLSDLDLLITDIGMPG 60

Query: 61  VDGFELRRRALKQRPDLPVFLISGRHEVADQSRAQGLSGFFRKPFD 106
           +DGFELR    K RP+LPVF+I+GRHE+ADQ RAQG SGFFRKPFD
Sbjct: 61  IDGFELRDLVKKSRPELPVFMITGRHEIADQGRAQGASGFFRKPFD 106