BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0041.0062.p         (60 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_744748.1| LysR family transcriptional regulator [Granulib...   100   1e-19
ref|YP_992570.1| LysR family transcriptional regulator [Burkhold...    99   1e-19
ref|ZP_00442128.2| putative HTH-type transcriptional regulator Y...    99   1e-19
ref|ZP_03455040.1| transcriptional regulator, LysR family [Burkh...    99   1e-19
ref|ZP_04886842.1| transcriptional regulator, LysR family [Burkh...    99   2e-19

>ref|YP_744748.1| LysR family transcriptional regulator [Granulibacter bethesdensis
          CGDNIH1]
 gb|ABI61826.1| transcriptional regulators, LysR family [Granulibacter
          bethesdensis CGDNIH1]
          Length = 331

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/55 (87%), Positives = 53/55 (96%)

Query: 1  LDRVDLFRIFARVVECASFTRAADTLGLPRSSVSSAVAELEQRVGARLLHRTTRK 55
          +DR+DLFRIF+RVVECASFTRAADTLG+PRSSVS+AV ELE RVGARLLHRTTRK
Sbjct: 31 VDRIDLFRIFSRVVECASFTRAADTLGMPRSSVSAAVQELEGRVGARLLHRTTRK 85


>ref|YP_992570.1| LysR family transcriptional regulator [Burkholderia mallei SAVP1]
 gb|ABM52514.1| transcriptional regulator, LysR family [Burkholderia mallei
          SAVP1]
          Length = 327

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 53/55 (96%)

Query: 1  LDRVDLFRIFARVVECASFTRAADTLGLPRSSVSSAVAELEQRVGARLLHRTTRK 55
          +DR+DLFR+FARVVECA+FTRAADTLG+PRSSVS+A+ ELE RVGARLLHRTTRK
Sbjct: 29 MDRIDLFRVFARVVECANFTRAADTLGMPRSSVSAAIQELEGRVGARLLHRTTRK 83


>ref|ZP_00442128.2| putative HTH-type transcriptional regulator YhjC [Burkholderia
          mallei GB8 horse 4]
 gb|EEP88154.1| putative HTH-type transcriptional regulator YhjC [Burkholderia
          mallei GB8 horse 4]
          Length = 267

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 53/55 (96%)

Query: 1  LDRVDLFRIFARVVECASFTRAADTLGLPRSSVSSAVAELEQRVGARLLHRTTRK 55
          +DR+DLFR+FARVVECA+FTRAADTLG+PRSSVS+A+ ELE RVGARLLHRTTRK
Sbjct: 29 MDRIDLFRVFARVVECANFTRAADTLGMPRSSVSAAIQELEGRVGARLLHRTTRK 83


>ref|ZP_03455040.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
          576]
 gb|EEC33418.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
          576]
          Length = 299

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 53/55 (96%)

Query: 1  LDRVDLFRIFARVVECASFTRAADTLGLPRSSVSSAVAELEQRVGARLLHRTTRK 55
          +DR+DLFR+FARVVECA+FTRAADTLG+PRSSVS+A+ ELE RVGARLLHRTTRK
Sbjct: 1  MDRIDLFRVFARVVECANFTRAADTLGMPRSSVSAAIQELEGRVGARLLHRTTRK 55


>ref|ZP_04886842.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
          1655]
 gb|EDU07826.1| transcriptional regulator, LysR family [Burkholderia pseudomallei
          1655]
          Length = 299

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 53/55 (96%)

Query: 1  LDRVDLFRIFARVVECASFTRAADTLGLPRSSVSSAVAELEQRVGARLLHRTTRK 55
          +DR+DLFR+FARVVECA+FTRAADTLG+PRSSVS+A+ ELE RVGARLLHRTTRK
Sbjct: 1  MDRIDLFRVFARVVECANFTRAADTLGMPRSSVSAAIQELEGRVGARLLHRTTRK 55