BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0055.p (224 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04587590.1| hypothetical protein POR16_09881 [Pseudomonas... 293 1e-77 ref|ZP_06495070.1| hypothetical protein PsyrpsF_13037 [Pseudomon... 293 1e-77 gb|EGH79908.1| hypothetical protein PSYAP_25124 [Pseudomonas syr... 292 3e-77 gb|EGH32794.1| hypothetical protein PSYJA_29066 [Pseudomonas syr... 290 1e-76 ref|YP_001205848.1| hypothetical protein BRADO3859 [Bradyrhizobi... 289 2e-76 >ref|ZP_04587590.1| hypothetical protein POR16_09881 [Pseudomonas syringae pv. oryzae str. 1_6] gb|EGI02041.1| hypothetical protein POR16_09881 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 225 Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 143/225 (63%), Positives = 175/225 (77%), Gaps = 1/225 (0%) Query: 1 MAIGFAIHKAKRKVSPDLVARYRTLPVANISDSMSRI-AGTNRLRPMHAGGWLGGPALTV 59 M IGF + A RKVSP+ VARYR +PVAN+SDSM+R+ AG +RLRPMH G L GPALTV Sbjct: 1 MTIGFRVLSAARKVSPEWVARYRDVPVANVSDSMNRMTAGGSRLRPMHRAGVLAGPALTV 60 Query: 60 KTRPGDNLMVHKAIDLAQPGDVIVVDAGGVLVNAIIGEIMSTLAEKKGVAGFVIDGSIRD 119 K RPGDNLM+H AID+AQPGDVIVVDAGG L NA+IGE+M A K+GVAG VI+G+IRD Sbjct: 61 KARPGDNLMLHYAIDIAQPGDVIVVDAGGDLTNALIGEMMVAYAVKRGVAGIVINGAIRD 120 Query: 120 AGAIRAGSFPVFAAGVAHRGPYKDGPGEINCAISIDGMIVEPGDLVVADDDGVLCVPYDD 179 A +I AG FP+FAAGV+HRGPYKDGPGEIN I+IDGM++E GDLV+ DDDG+LCVPYD Sbjct: 121 AASIGAGDFPMFAAGVSHRGPYKDGPGEINVPIAIDGMVIEAGDLVIGDDDGLLCVPYDQ 180 Query: 180 AEAICKLTEAKKATEEKAIQQILAGTSDRRWVDEALQRLGCEFED 224 + AK E+K ++QI G +DR WV E+L++ GC+ + Sbjct: 181 VAEVYDRAAAKHHAEQKQLEQIAKGENDRSWVLESLKKKGCQLPE 225 >ref|ZP_06495070.1| hypothetical protein PsyrpsF_13037 [Pseudomonas syringae pv. syringae FF5] gb|EGH45379.1| hypothetical protein PSYPI_24889 [Pseudomonas syringae pv. pisi str. 1704B] Length = 225 Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 141/223 (63%), Positives = 178/223 (79%), Gaps = 1/223 (0%) Query: 1 MAIGFAIHKAKRKVSPDLVARYRTLPVANISDSMSRI-AGTNRLRPMHAGGWLGGPALTV 59 M IGF + +A RKVS + V+RYR +PVAN+SDSM+R+ AG RLRPMH G L GPALTV Sbjct: 1 MTIGFRVLEAARKVSAEWVSRYRDVPVANVSDSMNRMTAGGARLRPMHREGVLAGPALTV 60 Query: 60 KTRPGDNLMVHKAIDLAQPGDVIVVDAGGVLVNAIIGEIMSTLAEKKGVAGFVIDGSIRD 119 K RPGDNLM+H AID+A+PGDVIVVDAGG L NA+IGE+M A K+GVAG VI+G+IRD Sbjct: 61 KARPGDNLMLHYAIDIAEPGDVIVVDAGGDLSNALIGEMMVAYAVKRGVAGIVINGAIRD 120 Query: 120 AGAIRAGSFPVFAAGVAHRGPYKDGPGEINCAISIDGMIVEPGDLVVADDDGVLCVPYDD 179 AG+I AG+FP+FAAG++HRGPYKDGPGEIN AI+IDGM++EPGDLV+ D+DG+LCVPYD Sbjct: 121 AGSIAAGTFPMFAAGISHRGPYKDGPGEINVAIAIDGMVIEPGDLVIGDEDGLLCVPYDQ 180 Query: 180 AEAICKLTEAKKATEEKAIQQILAGTSDRRWVDEALQRLGCEF 222 + AK E+K ++QI +G +DR WV E+L++ GC+ Sbjct: 181 VADVYDRASAKHHAEQKQLEQIASGENDRSWVLESLKKKGCQL 223 >gb|EGH79908.1| hypothetical protein PSYAP_25124 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 225 Score = 292 bits (747), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 140/223 (62%), Positives = 178/223 (79%), Gaps = 1/223 (0%) Query: 1 MAIGFAIHKAKRKVSPDLVARYRTLPVANISDSMSRI-AGTNRLRPMHAGGWLGGPALTV 59 M IGF + +A RKVS + V+RYR +PVAN+SDSM+R+ AG RLRPMH G L GPALTV Sbjct: 1 MTIGFRVLEAARKVSAEWVSRYRDVPVANVSDSMNRMTAGGARLRPMHREGLLAGPALTV 60 Query: 60 KTRPGDNLMVHKAIDLAQPGDVIVVDAGGVLVNAIIGEIMSTLAEKKGVAGFVIDGSIRD 119 K RPGDNLM+H AID+A+PGDVIVVDAGG L NA+IGE+M A K+GVAG VI+G+IRD Sbjct: 61 KARPGDNLMLHYAIDIAEPGDVIVVDAGGDLSNALIGEMMVAYAVKRGVAGIVINGAIRD 120 Query: 120 AGAIRAGSFPVFAAGVAHRGPYKDGPGEINCAISIDGMIVEPGDLVVADDDGVLCVPYDD 179 AG+I AG+FP+FAAG++HRGPYKDGPGEIN AI+IDGM++EPGDLV+ D+DG+LCVPYD Sbjct: 121 AGSIAAGTFPMFAAGISHRGPYKDGPGEINVAIAIDGMVIEPGDLVIGDEDGLLCVPYDQ 180 Query: 180 AEAICKLTEAKKATEEKAIQQILAGTSDRRWVDEALQRLGCEF 222 + AK ++K ++QI +G +DR WV E+L++ GC+ Sbjct: 181 VADVYDRASAKHHAKQKQLEQIASGENDRSWVLESLKKKGCQL 223 >gb|EGH32794.1| hypothetical protein PSYJA_29066 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 225 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 140/223 (62%), Positives = 177/223 (79%), Gaps = 1/223 (0%) Query: 1 MAIGFAIHKAKRKVSPDLVARYRTLPVANISDSMSRI-AGTNRLRPMHAGGWLGGPALTV 59 M IGF + +A RKVS + V+RYR +PVAN+SDSM+R+ AG RLRPMH G L GPALTV Sbjct: 1 MTIGFRVLEAARKVSAEWVSRYRDVPVANVSDSMNRMTAGGARLRPMHREGVLAGPALTV 60 Query: 60 KTRPGDNLMVHKAIDLAQPGDVIVVDAGGVLVNAIIGEIMSTLAEKKGVAGFVIDGSIRD 119 K RPGDNLM+H AID+A+PGDVIVVDAGG L NA+IGE+M A K+GVAG VI+G+IRD Sbjct: 61 KARPGDNLMLHYAIDIAEPGDVIVVDAGGDLSNALIGEMMVAYAVKRGVAGIVINGAIRD 120 Query: 120 AGAIRAGSFPVFAAGVAHRGPYKDGPGEINCAISIDGMIVEPGDLVVADDDGVLCVPYDD 179 AG+I AG FP+FAAG++HRGPYKDGPGEIN AI+IDGM++EPGDLV+ D+DG+LCVPY+ Sbjct: 121 AGSIAAGIFPMFAAGISHRGPYKDGPGEINVAIAIDGMVIEPGDLVIGDEDGLLCVPYEQ 180 Query: 180 AEAICKLTEAKKATEEKAIQQILAGTSDRRWVDEALQRLGCEF 222 + AK E+K ++QI +G +DR WV E+L++ GC+ Sbjct: 181 VADVYDRASAKHHAEQKQLEQIASGENDRSWVLESLKKKGCQL 223 >ref|YP_001205848.1| hypothetical protein BRADO3859 [Bradyrhizobium sp. ORS 278] emb|CAL77623.1| putative demethylmenaquinone methyltransferase [Bradyrhizobium sp. ORS 278] Length = 226 Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 138/224 (61%), Positives = 176/224 (78%), Gaps = 2/224 (0%) Query: 1 MAIGFAIH-KAKRKVSPDLVARYRTLPVANISDSMSRI-AGTNRLRPMHAGGWLGGPALT 58 M GF I+ K++VS DLV RYRTLPVAN+SDSMSR+ A RLRPMH GG L GPA+T Sbjct: 1 MTAGFRIYPNPKQRVSKDLVERYRTLPVANVSDSMSRMTAAGPRLRPMHGGGVLAGPAIT 60 Query: 59 VKTRPGDNLMVHKAIDLAQPGDVIVVDAGGVLVNAIIGEIMSTLAEKKGVAGFVIDGSIR 118 VK+RPGDNLM+HKA+D+A+PGD++VVDAGG L NA+IGE+M AE++G+ G VI+GS+R Sbjct: 61 VKSRPGDNLMLHKALDMAEPGDIVVVDAGGDLSNALIGEMMIAHAERRGLGGVVINGSVR 120 Query: 119 DAGAIRAGSFPVFAAGVAHRGPYKDGPGEINCAISIDGMIVEPGDLVVADDDGVLCVPYD 178 DA AIRAG+FP+FAAGV HRGPYKDGPGEIN AI+IDGM++ PGDL++ DDDG++CVP+ Sbjct: 121 DAAAIRAGTFPIFAAGVTHRGPYKDGPGEINVAIAIDGMVIHPGDLILGDDDGLVCVPFA 180 Query: 179 DAEAICKLTEAKKATEEKAIQQILAGTSDRRWVDEALQRLGCEF 222 DAE++ K E + I AG +DR WVD+ L++ G E+ Sbjct: 181 DAESVFAAATKKHEVETAQLAAIAAGRNDRSWVDDELKKRGVEY 224