BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0054.p (341 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003909577.1| amidohydrolase 2 [Burkholderia sp. CCGE1003]... 515 e-144 ref|YP_001889817.1| amidohydrolase 2 [Burkholderia phytofirmans ... 514 e-143 ref|YP_934046.1| 4-oxalomesaconate hydratase [Azoarcus sp. BH72]... 513 e-143 ref|ZP_02885038.1| amidohydrolase 2 [Burkholderia graminis C4D1M... 511 e-143 ref|YP_004361549.1| putative 4-oxalomesaconate hydratase [Burkho... 510 e-142 >ref|YP_003909577.1| amidohydrolase 2 [Burkholderia sp. CCGE1003] gb|ADN60286.1| amidohydrolase 2 [Burkholderia sp. CCGE1003] Length = 346 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 242/340 (71%), Positives = 279/340 (82%), Gaps = 3/340 (0%) Query: 1 MIIDCHGHYTTEPAKLQIFRDKQLAGLADKSRRPLTTNLGITDDEIRSSVEGAQLRLQKE 60 MIIDCHGHYTT P + + +R +Q+A L D P GI+DDEIR S+E QLR+Q+E Sbjct: 1 MIIDCHGHYTTSPPQHEAWRTQQIAALRDGHTPP--PRPGISDDEIRESIETGQLRIQRE 58 Query: 61 RGTDVTIFSPRAAGMAHHVGKEATSREWTTICNDLVHRVCTLFPQNFVPVCQLPQSPGVK 120 RGTD+TIFSPRAAGM HH+ E + +W+ CNDLVHRVC LFP+NFV VCQLPQ+PG Sbjct: 59 RGTDLTIFSPRAAGMGHHLATEEANAQWSRECNDLVHRVCALFPRNFVGVCQLPQAPGAP 118 Query: 121 PANCIEELERCVTQLGFVGCNLNPDPAGGYWCDPPLTDEWWYPLYEKMVELDVPAMVHVS 180 PANCI+EL RCV +LGF+GCNLNPDP+GG+W PLTD WYPLYE MVEL+VPAM+HVS Sbjct: 119 PANCIDELRRCVEELGFIGCNLNPDPSGGHWSGLPLTDRSWYPLYEAMVELEVPAMIHVS 178 Query: 181 SSCNPCFHGTGAHYLNGDTTAFMQFLTSDLFKRFPTLRFIIPHGGGAVPYHWGRYRGLAQ 240 SSCNP FH TGAHY+NGDT+AFMQ LT DLF FPTLRFIIPHGGGAVPYHWGRYRGLAQ Sbjct: 179 SSCNPNFHATGAHYINGDTSAFMQLLTGDLFADFPTLRFIIPHGGGAVPYHWGRYRGLAQ 238 Query: 241 DMKLPPLSEHLLKNVFFDTCVYHLPGIELLTRVIPVENILFASEMVGAVRGIDPETGHHF 300 DMK P L ++LL NVFFDTCVYH PG ELL +VIPVENILFASE +GAV+GIDPETGHH+ Sbjct: 239 DMKRPLLRDYLLNNVFFDTCVYHQPGAELLAKVIPVENILFASETIGAVQGIDPETGHHY 298 Query: 301 DDTRRYIDALP-LSAADKAKIFEGNARRVYPRLNAHLDRR 339 DDTRRYIDA+ LS AD+ +I+E NAR VYPRL+ LDR+ Sbjct: 299 DDTRRYIDAIEWLSDADRQRIYEDNARAVYPRLSRQLDRQ 338 >ref|YP_001889817.1| amidohydrolase 2 [Burkholderia phytofirmans PsJN] gb|ACD20446.1| amidohydrolase 2 [Burkholderia phytofirmans PsJN] Length = 349 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 244/338 (72%), Positives = 276/338 (81%), Gaps = 3/338 (0%) Query: 1 MIIDCHGHYTTEPAKLQIFRDKQLAGLADKSRRPLTTNLGITDDEIRSSVEGAQLRLQKE 60 MIIDCHGHYTT P + + +R +Q+A L D P ITDDEIR S+EG QLR+Q E Sbjct: 1 MIIDCHGHYTTSPPQHEAWRAQQIAALKDGGTTP--PRPVITDDEIRESIEGGQLRIQHE 58 Query: 61 RGTDVTIFSPRAAGMAHHVGKEATSREWTTICNDLVHRVCTLFPQNFVPVCQLPQSPGVK 120 RGTD+TIFSPRAAGM HH+ + W++ CNDLVHRVC LFP+NFV VCQLPQ+PGV Sbjct: 59 RGTDLTIFSPRAAGMGHHLATAEANALWSSECNDLVHRVCELFPRNFVGVCQLPQAPGVA 118 Query: 121 PANCIEELERCVTQLGFVGCNLNPDPAGGYWCDPPLTDEWWYPLYEKMVELDVPAMVHVS 180 PANCI EL RCV +LGF+GCNLNPDP+GG+W PLTD WYPLYE MVELDVPAM+HVS Sbjct: 119 PANCIGELRRCVEELGFIGCNLNPDPSGGHWSGLPLTDRCWYPLYEAMVELDVPAMIHVS 178 Query: 181 SSCNPCFHGTGAHYLNGDTTAFMQFLTSDLFKRFPTLRFIIPHGGGAVPYHWGRYRGLAQ 240 SSCNP FH TGAHY+NGDT+AFMQ L DLF FPTLRFIIPHGGGAVPYHWGRYRGLAQ Sbjct: 179 SSCNPNFHATGAHYINGDTSAFMQLLQGDLFADFPTLRFIIPHGGGAVPYHWGRYRGLAQ 238 Query: 241 DMKLPPLSEHLLKNVFFDTCVYHLPGIELLTRVIPVENILFASEMVGAVRGIDPETGHHF 300 DMK P LSE+LLKNVFFDTCVYH PG ELL +VIPVENILFASE +GAV+GIDPETGH++ Sbjct: 239 DMKRPLLSEYLLKNVFFDTCVYHQPGAELLAKVIPVENILFASETIGAVQGIDPETGHYY 298 Query: 301 DDTRRYIDALP-LSAADKAKIFEGNARRVYPRLNAHLD 337 DDTRRYIDA+ LS AD+ +I+E NAR VYPRL+ LD Sbjct: 299 DDTRRYIDAIEWLSDADRQRIYEDNARSVYPRLSRQLD 336 >ref|YP_934046.1| 4-oxalomesaconate hydratase [Azoarcus sp. BH72] emb|CAL95159.1| probable 4-oxalomesaconate hydratase [Azoarcus sp. BH72] Length = 341 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 231/340 (67%), Positives = 279/340 (82%) Query: 1 MIIDCHGHYTTEPAKLQIFRDKQLAGLADKSRRPLTTNLGITDDEIRSSVEGAQLRLQKE 60 MIIDCHGHYTT P L+ +R+KQ+AG+ D + P ++L I+DDE+R ++E QLRL KE Sbjct: 1 MIIDCHGHYTTAPKALEEWRNKQIAGIKDPAVMPKVSDLKISDDELRETIETNQLRLMKE 60 Query: 61 RGTDVTIFSPRAAGMAHHVGKEATSREWTTICNDLVHRVCTLFPQNFVPVCQLPQSPGVK 120 RG+D+TIFSPRA+ MAHH+G S W ICN+L +RV LFP NF+ LPQSPGV Sbjct: 61 RGSDLTIFSPRASFMAHHIGDFNISSTWAAICNELCYRVSQLFPDNFIGAAMLPQSPGVD 120 Query: 121 PANCIEELERCVTQLGFVGCNLNPDPAGGYWCDPPLTDEWWYPLYEKMVELDVPAMVHVS 180 PA CI ELE+C+ + GFVG NLNPDP+GG+W PPL+D WYP+YEKMVE D+PAMVHVS Sbjct: 121 PATCIPELEKCIKEFGFVGINLNPDPSGGHWTSPPLSDRQWYPIYEKMVEYDIPAMVHVS 180 Query: 181 SSCNPCFHGTGAHYLNGDTTAFMQFLTSDLFKRFPTLRFIIPHGGGAVPYHWGRYRGLAQ 240 +SCN CFH TGAHYLN DTTAFMQ LTSDLFK FPTL+F+IPHGGGAVPYHWGR+RGLAQ Sbjct: 181 TSCNGCFHTTGAHYLNADTTAFMQCLTSDLFKDFPTLKFVIPHGGGAVPYHWGRFRGLAQ 240 Query: 241 DMKLPPLSEHLLKNVFFDTCVYHLPGIELLTRVIPVENILFASEMVGAVRGIDPETGHHF 300 ++K P L +HLL N+FFDTCVYH PGI+LLT+VIPVEN+LFASEM+GAVRGIDPETGH++ Sbjct: 241 ELKKPLLKDHLLNNIFFDTCVYHQPGIDLLTKVIPVENVLFASEMIGAVRGIDPETGHYY 300 Query: 301 DDTRRYIDALPLSAADKAKIFEGNARRVYPRLNAHLDRRA 340 DDT+RYI+A +SA D+ KI+EGNARRVYPRL+A L + Sbjct: 301 DDTKRYIEAAAISAEDRYKIYEGNARRVYPRLDAALKAKG 340 >ref|ZP_02885038.1| amidohydrolase 2 [Burkholderia graminis C4D1M] gb|EDT09470.1| amidohydrolase 2 [Burkholderia graminis C4D1M] Length = 346 Score = 511 bits (1315), Expect = e-143, Method: Compositional matrix adjust. Identities = 240/340 (70%), Positives = 278/340 (81%), Gaps = 3/340 (0%) Query: 1 MIIDCHGHYTTEPAKLQIFRDKQLAGLADKSRRPLTTNLGITDDEIRSSVEGAQLRLQKE 60 MIIDCHGHYTT P + + +R +Q+A L D P N I+DDEIR S+E QLR+Q+E Sbjct: 1 MIIDCHGHYTTSPPQHEAWRIQQIAALKDGHMPPARPN--ISDDEIRESIETGQLRIQRE 58 Query: 61 RGTDVTIFSPRAAGMAHHVGKEATSREWTTICNDLVHRVCTLFPQNFVPVCQLPQSPGVK 120 RGTD+TIFSPRAAGM HH+ + W+ CNDLVHRVC+LFP+NFV VCQLPQ+PGV Sbjct: 59 RGTDLTIFSPRAAGMGHHLATAEANAHWSRECNDLVHRVCSLFPRNFVGVCQLPQAPGVP 118 Query: 121 PANCIEELERCVTQLGFVGCNLNPDPAGGYWCDPPLTDEWWYPLYEKMVELDVPAMVHVS 180 PANCI+EL RCV +LGF+GCNLNPDP+GG+W PLTD WYPLYE MVELDVPAM+HVS Sbjct: 119 PANCIDELRRCVEELGFIGCNLNPDPSGGHWSGLPLTDRSWYPLYEAMVELDVPAMIHVS 178 Query: 181 SSCNPCFHGTGAHYLNGDTTAFMQFLTSDLFKRFPTLRFIIPHGGGAVPYHWGRYRGLAQ 240 SSCNP FH TGAHY+NGDT+ FMQ LT DLF FPTLRF+IPHGGGAVPYHWGRYRGLAQ Sbjct: 179 SSCNPNFHATGAHYINGDTSVFMQLLTGDLFADFPTLRFVIPHGGGAVPYHWGRYRGLAQ 238 Query: 241 DMKLPPLSEHLLKNVFFDTCVYHLPGIELLTRVIPVENILFASEMVGAVRGIDPETGHHF 300 DMK P L ++LL NVFFDTCVYH PG ELL +VIPVENILFASE +GAV+GIDPETGH++ Sbjct: 239 DMKRPLLRDYLLNNVFFDTCVYHQPGAELLAKVIPVENILFASETIGAVQGIDPETGHYY 298 Query: 301 DDTRRYIDALP-LSAADKAKIFEGNARRVYPRLNAHLDRR 339 DDTRRYIDA+ LS AD+ +I+E NAR VYPRL+ LDR+ Sbjct: 299 DDTRRYIDAIGWLSDADRQRIYEDNARAVYPRLSRQLDRQ 338 >ref|YP_004361549.1| putative 4-oxalomesaconate hydratase [Burkholderia gladioli BSR3] gb|AEA61593.1| putative 4-oxalomesaconate hydratase [Burkholderia gladioli BSR3] Length = 346 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 242/341 (70%), Positives = 274/341 (80%), Gaps = 3/341 (0%) Query: 1 MIIDCHGHYTTEPAKLQIFRDKQLAGLADKSRRPLTTNLGITDDEIRSSVEGAQLRLQKE 60 MIIDCHGHYTT P + + +R KQ+A L D P I+DDEIR S+EG QLR+Q+E Sbjct: 1 MIIDCHGHYTTSPPQHEAWRAKQIAALKDGLAPPARPV--ISDDEIRESIEGGQLRIQRE 58 Query: 61 RGTDVTIFSPRAAGMAHHVGKEATSREWTTICNDLVHRVCTLFPQNFVPVCQLPQSPGVK 120 RGTD+TIFSPRAAGM HH+ + W++ CN+LVHRVC LFP+NFV VCQLPQ+PG Sbjct: 59 RGTDLTIFSPRAAGMGHHLAPAEANAVWSSACNELVHRVCELFPRNFVGVCQLPQAPGTG 118 Query: 121 PANCIEELERCVTQLGFVGCNLNPDPAGGYWCDPPLTDEWWYPLYEKMVELDVPAMVHVS 180 P NCI EL RCV ++GFVGCNLNPDP+GG+W PLTD WYPLYE MVELDVPAM+HVS Sbjct: 119 PENCIAELRRCVREMGFVGCNLNPDPSGGHWSGLPLTDRSWYPLYEAMVELDVPAMIHVS 178 Query: 181 SSCNPCFHGTGAHYLNGDTTAFMQFLTSDLFKRFPTLRFIIPHGGGAVPYHWGRYRGLAQ 240 SSCNP FH TGAHYLNGDT+AFMQ L DLF FPTL+FIIPHGGGAVPYHWGRYRGLAQ Sbjct: 179 SSCNPNFHVTGAHYLNGDTSAFMQLLEGDLFADFPTLKFIIPHGGGAVPYHWGRYRGLAQ 238 Query: 241 DMKLPPLSEHLLKNVFFDTCVYHLPGIELLTRVIPVENILFASEMVGAVRGIDPETGHHF 300 DMK P L EHLL NVFFDTCVYH PG ELL RVIPV+NILFASE +GAV+GIDPETGHHF Sbjct: 239 DMKRPLLGEHLLNNVFFDTCVYHQPGAELLARVIPVKNILFASETIGAVQGIDPETGHHF 298 Query: 301 DDTRRYIDALP-LSAADKAKIFEGNARRVYPRLNAHLDRRA 340 DDTRRYIDA+ L D+ +IFEGNAR VY RL+A L+R+ Sbjct: 299 DDTRRYIDAIEWLDGKDRHRIFEGNARAVYGRLSAQLERQG 339