BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0043.p (199 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773849.1| glutamine amidotransferase [Bradyrhizobium japo... 279 1e-73 ref|YP_761913.1| class I glutamine amidotransferase domain-conta... 173 1e-41 ref|ZP_08268597.1| glutamine amidotransferase class-I family pro... 167 1e-39 ref|YP_002515789.1| GMP synthase [Caulobacter crescentus NA1000]... 162 2e-38 ref|NP_419228.1| glutamine amidotransferase, class-I family prot... 162 2e-38 >ref|NP_773849.1| glutamine amidotransferase [Bradyrhizobium japonicum USDA 110] dbj|BAC52474.1| blr7209 [Bradyrhizobium japonicum USDA 110] Length = 239 Score = 279 bits (714), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 126/191 (65%), Positives = 158/191 (82%) Query: 4 DVVSLANGETLPDPAALDAILITGSAAGVYDDVEWIAPLEAFVRTAHDKRIPTVGVCFGH 63 DV+S+ NG+ LPDP L+A+LITG+AAGVYD ++WIA LE FVRTA+ + P VGVCFGH Sbjct: 41 DVISIPNGDALPDPGKLEAVLITGAAAGVYDGLDWIASLEDFVRTAYANKTPMVGVCFGH 100 Query: 64 QLIAQALGGTVRKSEKGWGIGRHVYRIAPDNGLIDGETIAVACSHQDQMITPPASARTIL 123 QLIAQALGGTVRKSEKGWGIGRHVY++ P+NG+++GE +A+A SHQDQ++ PP A TIL Sbjct: 101 QLIAQALGGTVRKSEKGWGIGRHVYQVLPENGVVEGEAVAIAASHQDQVVEPPTDALTIL 160 Query: 124 SSGFTPHAGLLYANGTTLSVQPHPEFTADYAGALCDLHRGRAPDALIEAAKSSLTEPLDH 183 SS FTPHAGLLYANG TL+VQPHPEF ++A C+L G+APD ++ A++SL +PLD+ Sbjct: 161 SSEFTPHAGLLYANGATLTVQPHPEFDVEFAQVCCELRDGKAPDDVVATARASLAQPLDN 220 Query: 184 ATLGGVVTRFL 194 A LGG +TRFL Sbjct: 221 AKLGGAITRFL 231 >ref|YP_761913.1| class I glutamine amidotransferase domain-containing protein [Hyphomonas neptunium ATCC 15444] gb|ABI77537.1| class I glutamine amidotransferase domain protein [Hyphomonas neptunium ATCC 15444] Length = 243 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 95/198 (47%), Positives = 118/198 (59%), Gaps = 4/198 (2%) Query: 1 VACDVVSLANGETLPDPAALDAILITGSAAGVYDDVEWIAPLEAFVRTAHDKRIPTVGVC 60 + C+ VSL G LPDPA L+A+L TGS AGVYDD W+APL F+R + P +G+C Sbjct: 37 IVCETVSLVKGAALPDPARLEAVLYTGSPAGVYDDEPWMAPLMDFIRAGAQAKCPQLGIC 96 Query: 61 FGHQLIAQALGGTVRKSEKGWGIGRHVYRIAPDNGLIDGETIA---VACSHQDQMITPPA 117 FGHQ++AQALGG V KS+KGWG+G H Y IA G G A V SHQDQ++ P Sbjct: 97 FGHQVMAQALGGNVVKSDKGWGVGAHTYEIAALPGWRGGAAPAQMRVGVSHQDQVVAVPP 156 Query: 118 SARTILSSGFTPHAGLLYANGTTLSVQPHPEFTADYAGALCDLHRGRA-PDALIEAAKSS 176 A I S FT AGL YA +S Q HPEF AD+ AL RG++ + L +AA +S Sbjct: 157 GADVIAHSDFTEFAGLSYAGFPAISFQCHPEFEADFLAALYTARRGQSLSEDLADAAVAS 216 Query: 177 LTEPLDHATLGGVVTRFL 194 L E D L + FL Sbjct: 217 LQEENDRRFLAQWLASFL 234 >ref|ZP_08268597.1| glutamine amidotransferase class-I family protein [Brevundimonas diminuta ATCC 11568] gb|EGF95119.1| glutamine amidotransferase class-I family protein [Brevundimonas diminuta ATCC 11568] Length = 256 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 87/186 (46%), Positives = 116/186 (62%), Gaps = 4/186 (2%) Query: 11 GETLPDPAALDAILITGSAAGVYDDVEWIAPLEAFVRTAHDKRIPTVGVCFGHQLIAQAL 70 GE DP+A ++TGSAAGVY+D+ WI PL A++R A K VGVCFGHQ++A A Sbjct: 69 GELPEDPSAFAGTIVTGSAAGVYEDLPWIEPLSAWLREARGK-TRLVGVCFGHQILAHAF 127 Query: 71 GGTVRKSEKGWGIGRHVYRIAPDNGLI--DGETIAVACSHQDQMITPPASARTILSSGFT 128 GG V KS+KGWG+G H Y + D + TIA+ SHQDQ++ PA AR ++SS FT Sbjct: 128 GGRVEKSDKGWGVGLHRYDVLSDEAWMTPTAATIAIPVSHQDQVVAAPADARVLISSAFT 187 Query: 129 PHAGLLYANGTTLSVQPHPEFTADYAGALCDLHRGRAPDALIEAAKSSLTEPLDHATLGG 188 P+AGL + +S Q HPEF +A L + RGR DAL++ A ++L EP D A L Sbjct: 188 PYAGLAWGQ-DAISFQCHPEFDPAFAARLTEGRRGRIDDALVDQAHATLAEPNDRAVLAD 246 Query: 189 VVTRFL 194 + +L Sbjct: 247 WIRAYL 252 >ref|YP_002515789.1| GMP synthase [Caulobacter crescentus NA1000] gb|ACL93881.1| GMP synthase (glutamine-hydrolyzing) [Caulobacter crescentus NA1000] Length = 233 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/200 (45%), Positives = 118/200 (59%), Gaps = 3/200 (1%) Query: 2 ACDVVSLANGETLPDPAALDAILITGSAAGVYDDVEWIAPLEAFVRTAHDKRIPTVGVCF 61 A + GE PA DA +ITGS+AGVYD + WI PL+AF+R+A + P VGVCF Sbjct: 35 AYRAYDVQRGELPAHPAENDAYVITGSSAGVYDPLPWIEPLKAFLRSARGE-TPLVGVCF 93 Query: 62 GHQLIAQALGGTVRKSEKGWGIGRHVYRIAPDN-GLIDGETIAVACSHQDQMITPPASAR 120 GHQ++A+A GG V KS KGWG+G Y +A + D +AV SHQDQ++ P +AR Sbjct: 94 GHQIMAEAFGGKVEKSPKGWGVGLQAYAVAERAVWMDDAAEVAVPGSHQDQVVDLPPTAR 153 Query: 121 TILSSGFTPHAGLLYANGTTLSVQPHPEFTADYAGALCDLHRG-RAPDALIEAAKSSLTE 179 + S FTP+ L Y + +S+Q HPEF DYA AL + RG R D +AA +SL Sbjct: 154 VLAGSAFTPYGILAYDDAPAISMQFHPEFAPDYAKALIEARRGTRYTDPQADAAIASLDS 213 Query: 180 PLDHATLGGVVTRFLVHGGS 199 P D A + + RFL S Sbjct: 214 PNDRARMADWIRRFLAQASS 233 >ref|NP_419228.1| glutamine amidotransferase, class-I family protein [Caulobacter crescentus CB15] gb|AAK22396.1| glutamine amidotransferase, class-I family protein [Caulobacter crescentus CB15] Length = 238 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/200 (45%), Positives = 118/200 (59%), Gaps = 3/200 (1%) Query: 2 ACDVVSLANGETLPDPAALDAILITGSAAGVYDDVEWIAPLEAFVRTAHDKRIPTVGVCF 61 A + GE PA DA +ITGS+AGVYD + WI PL+AF+R+A + P VGVCF Sbjct: 40 AYRAYDVQRGELPAHPAENDAYVITGSSAGVYDPLPWIEPLKAFLRSARGE-TPLVGVCF 98 Query: 62 GHQLIAQALGGTVRKSEKGWGIGRHVYRIAPDN-GLIDGETIAVACSHQDQMITPPASAR 120 GHQ++A+A GG V KS KGWG+G Y +A + D +AV SHQDQ++ P +AR Sbjct: 99 GHQIMAEAFGGKVEKSPKGWGVGLQAYAVAERAVWMDDAAEVAVPGSHQDQVVDLPPTAR 158 Query: 121 TILSSGFTPHAGLLYANGTTLSVQPHPEFTADYAGALCDLHRG-RAPDALIEAAKSSLTE 179 + S FTP+ L Y + +S+Q HPEF DYA AL + RG R D +AA +SL Sbjct: 159 VLAGSAFTPYGILAYDDAPAISMQFHPEFAPDYAKALIEARRGTRYTDPQADAAIASLDS 218 Query: 180 PLDHATLGGVVTRFLVHGGS 199 P D A + + RFL S Sbjct: 219 PNDRARMADWIRRFLAQASS 238