BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0041.p (157 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_485122.1| AsnC family transcriptional regulator [Rhodopse... 202 2e-50 ref|ZP_07026511.1| transcriptional regulator, AsnC family [Afipi... 200 6e-50 ref|NP_769818.1| transcriptional regulator [Bradyrhizobium japon... 179 1e-43 ref|YP_004676550.1| Bkd operon transcriptional regulator [Hyphom... 176 1e-42 ref|YP_004613082.1| AsnC family transcriptional regulator [Mesor... 163 6e-39 >ref|YP_485122.1| AsnC family transcriptional regulator [Rhodopseudomonas palustris HaA2] gb|ABD06211.1| transcriptional regulator, AsnC family [Rhodopseudomonas palustris HaA2] Length = 158 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 98/153 (64%), Positives = 119/153 (77%) Query: 5 DRIDLRILAELVADARASQIELAEKVGLSPTACARRIRHLEEIGVIRGYRVDLEPSALGL 64 D ID +IL LV DAR SQ+ L+E+VGLSPTAC RR+ LE+ GVIRGY D++ + LG Sbjct: 6 DPIDRKILRHLVQDARISQVVLSERVGLSPTACTRRMLQLEKTGVIRGYSADVDAAELGF 65 Query: 65 VTTVVVTITLEKQSEDYLAAFEAAIARCPDVVSCHLMSGSDDYHLQVIARDIADFERIHK 124 TV+V ITL+KQSED L+AFE I +CPDVVSC LMSG+DDY +QV ARD+ D+ERIHK Sbjct: 66 TMTVLVHITLDKQSEDALSAFEREIVKCPDVVSCFLMSGNDDYLVQVQARDMQDYERIHK 125 Query: 125 QHLSRMPGVARIHSSFAMREVVRRTIPETALRG 157 QHLSRMPGV+R+HSSF MR V+ R+I AL G Sbjct: 126 QHLSRMPGVSRLHSSFVMRSVIERSISPAALGG 158 >ref|ZP_07026511.1| transcriptional regulator, AsnC family [Afipia sp. 1NLS2] gb|EFI53653.1| transcriptional regulator, AsnC family [Afipia sp. 1NLS2] Length = 158 Score = 200 bits (508), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 95/151 (62%), Positives = 121/151 (80%) Query: 7 IDLRILAELVADARASQIELAEKVGLSPTACARRIRHLEEIGVIRGYRVDLEPSALGLVT 66 +D +I+ ELV DAR S + L+EKVGLSPTACARR++ LE+ GVIRGY +++ + LG + Sbjct: 8 MDRKIMRELVKDARISHVLLSEKVGLSPTACARRLQQLEQSGVIRGYSANIDAAGLGFMM 67 Query: 67 TVVVTITLEKQSEDYLAAFEAAIARCPDVVSCHLMSGSDDYHLQVIARDIADFERIHKQH 126 TV+V ITL++QSED LA FE + C +VV+CHLMSGSDDY +QV ARD+AD+ERIHKQH Sbjct: 68 TVLVHITLDRQSEDALARFEKEVTECHEVVACHLMSGSDDYLVQVQARDMADYERIHKQH 127 Query: 127 LSRMPGVARIHSSFAMREVVRRTIPETALRG 157 LSRMPGVAR+HSSFAMR VV+R++ L G Sbjct: 128 LSRMPGVARLHSSFAMRAVVQRSVSPAVLNG 158 >ref|NP_769818.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC48443.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 185 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 90/149 (60%), Positives = 109/149 (73%) Query: 3 GLDRIDLRILAELVADARASQIELAEKVGLSPTACARRIRHLEEIGVIRGYRVDLEPSAL 62 LDR DL ILAEL +ARAS ELA KVGLS TA ARR + LE+ G I+ Y+ L+ + Sbjct: 28 ALDRKDLAILAELTTNARASHTELANKVGLSSTALARRQKALEDDGYIQAYQAALDLAQF 87 Query: 63 GLVTTVVVTITLEKQSEDYLAAFEAAIARCPDVVSCHLMSGSDDYHLQVIARDIADFERI 122 GL TTV+V I LE QS++ L AFEA + +CP VV C LMSG+DDY L V+ARDI DFERI Sbjct: 88 GLTTTVLVRIALESQSDEALKAFEAEVVKCPSVVRCFLMSGTDDYILIVLARDIQDFERI 147 Query: 123 HKQHLSRMPGVARIHSSFAMREVVRRTIP 151 H+ LSR+P VAR+ SSFA+REVV R +P Sbjct: 148 HRTELSRLPRVARVQSSFALREVVNRAVP 176 >ref|YP_004676550.1| Bkd operon transcriptional regulator [Hyphomicrobium sp. MC1] emb|CCB65982.1| Bkd operon transcriptional regulator [Hyphomicrobium sp. MC1] Length = 159 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 87/152 (57%), Positives = 114/152 (75%) Query: 4 LDRIDLRILAELVADARASQIELAEKVGLSPTACARRIRHLEEIGVIRGYRVDLEPSALG 63 LD +D ILA L+ D R SQ++LAE+V LSPTA ARRI+ LE+ GVI GY+ + ALG Sbjct: 6 LDALDKAILAALLVDGRQSQVDLAERVPLSPTAIARRIKALEQSGVIDGYQARVNRKALG 65 Query: 64 LVTTVVVTITLEKQSEDYLAAFEAAIARCPDVVSCHLMSGSDDYHLQVIARDIADFERIH 123 L VV I+LE QS++ L AFE A A P +VSC++MSG DDY + V+ARD+ADFERIH Sbjct: 66 LSMMAVVQISLESQSQELLEAFEKAAAAAPSIVSCYMMSGQDDYLITVLARDLADFERIH 125 Query: 124 KQHLSRMPGVARIHSSFAMREVVRRTIPETAL 155 K+ LSR+PGV+R+HSSF +REV R++P ++L Sbjct: 126 KEQLSRLPGVSRLHSSFVLREVASRSLPVSSL 157 >ref|YP_004613082.1| AsnC family transcriptional regulator [Mesorhizobium opportunistum WSM2075] gb|AEH88988.1| transcriptional regulator, AsnC family [Mesorhizobium opportunistum WSM2075] Length = 157 Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 85/155 (54%), Positives = 107/155 (69%), Gaps = 4/155 (2%) Query: 4 LDRIDLRILAELVADARASQIELAEKVGLSPTACARRIRHLEEIGVIRGYRVDLEPSALG 63 LDRID+ IL L D R LAEKVGLS +AC+RR+ +LE+ G IRGY L +ALG Sbjct: 3 LDRIDIAILESLQKDGRIPNAALAEKVGLSQSACSRRLDNLEKSGTIRGYHARLSNAALG 62 Query: 64 LVTTVVVTITLEKQSEDYLAAFEAAIARCPDVVSCHLMSGSDDYHLQVIARDIADFERIH 123 T +V I+L Q E L+ FEAAI RCP+V+SCHLMSG DY L++ A+D+ D+ERIH Sbjct: 63 HQMTAIVHISLSGQFEKTLSDFEAAIKRCPNVLSCHLMSGEYDYILRIAAKDLVDYERIH 122 Query: 124 KQHLSRMPGVARIHSSFAMREVVRRTI----PETA 154 K+ LS MP V +I+SSFA+RE+V RT PE A Sbjct: 123 KEWLSAMPHVTKINSSFALREIVDRTAMGMKPEMA 157