BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0040.p (371 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_385730.1| alanine dehydrogenase oxidoreductase protein [S... 539 e-151 ref|YP_001327051.1| alanine dehydrogenase [Sinorhizobium medicae... 535 e-150 ref|YP_002826017.1| alanine dehydrogenase [Sinorhizobium fredii ... 534 e-149 ref|YP_673989.1| L-alanine dehydrogenase [Mesorhizobium sp. BNC1... 533 e-149 gb|ABC26869.1| AldA [Bradyrhizobium sp. UPM1167] 530 e-148 >ref|NP_385730.1| alanine dehydrogenase oxidoreductase protein [Sinorhizobium meliloti 1021] ref|YP_004548879.1| alanine dehydrogenase [Sinorhizobium meliloti AK83] emb|CAC46203.1| Probable alanine dehydrogenase oxidoreductase [Sinorhizobium meliloti 1021] gb|AEG04288.1| alanine dehydrogenase [Sinorhizobium meliloti BL225C] gb|AEG53265.1| alanine dehydrogenase [Sinorhizobium meliloti AK83] gb|AEH79135.1| Alanine dehydrogenase [Sinorhizobium meliloti SM11] Length = 372 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 269/369 (72%), Positives = 309/369 (83%) Query: 1 MRIGVPKEIKVEEYRVGLTPASVREYVAHGHEVVVQRGAGDGIGAGDEVYTQAGARIADT 60 MR+G PKEIK EYRVGLTP SVREYVAHGHEV+V+ AG GIGA D+ Y AGARI T Sbjct: 1 MRVGCPKEIKNHEYRVGLTPGSVREYVAHGHEVIVETKAGAGIGADDDSYRAAGARIVPT 60 Query: 61 AEEVFSVAEMIVKVKEPQPSEWIRLREGQILFTYLHLAPDVPQTAGLIASGCTAVAYETV 120 A EVF A+MIVKVKEPQPSEW +LREGQIL+TYLHLAPD QT GL+ SG TAVAYETV Sbjct: 61 AREVFEKADMIVKVKEPQPSEWAQLREGQILYTYLHLAPDPEQTQGLLKSGVTAVAYETV 120 Query: 121 TDAHGGLPLLAPMSEVAGRLAIEAAGAALRKSADGMGKLLGGVPGVPPARVAIIGGGVVG 180 TD GGLPLLAPMSEVAGRLAI+A +L+K+ G G LLGGVPGV PA+VAIIGGGVVG Sbjct: 121 TDERGGLPLLAPMSEVAGRLAIQAGATSLQKANGGRGILLGGVPGVLPAKVAIIGGGVVG 180 Query: 181 THAARMAAGLGSDVTILDRSLPRLRALDDLFLGRVRTRYATLEAIEQEVFAADVVIGAVL 240 HAA+MAAGLG+DV+ILDRSLPRLR LDD+F GRV TRY+T++A+E+EVF+AD+VIGAVL Sbjct: 181 LHAAKMAAGLGADVSILDRSLPRLRQLDDIFNGRVHTRYSTIDALEEEVFSADMVIGAVL 240 Query: 241 VPGASAPKLVSRAQLAGMKRRAVLVDVAIDQGGCFETSKPTTHQAPTYLVDDIVHYCVAN 300 +PGA+APKLV+R L+ MK+ AV+VDVAIDQGGCFETS TTH PTY V+ IVHYCVAN Sbjct: 241 IPGAAAPKLVTREMLSAMKKGAVIVDVAIDQGGCFETSHATTHSEPTYEVEGIVHYCVAN 300 Query: 301 MPGAVPVTSSHALNHATLPFGLALAAKGLRALVEDPHLRAGLNVHRGRITNRAVAESQHL 360 MPGAVP+TS+HALN+ATL +GL LA +GL+A+ ED HLRAGLNVHRGR+TN AVAE+ Sbjct: 301 MPGAVPITSAHALNNATLQYGLQLADRGLKAIAEDRHLRAGLNVHRGRVTNAAVAEALGY 360 Query: 361 SAVMPEEAL 369 A PE L Sbjct: 361 DAHAPEAVL 369 >ref|YP_001327051.1| alanine dehydrogenase [Sinorhizobium medicae WSM419] gb|ABR60216.1| alanine dehydrogenase [Sinorhizobium medicae WSM419] Length = 372 Score = 535 bits (1377), Expect = e-150, Method: Compositional matrix adjust. Identities = 266/369 (72%), Positives = 308/369 (83%) Query: 1 MRIGVPKEIKVEEYRVGLTPASVREYVAHGHEVVVQRGAGDGIGAGDEVYTQAGARIADT 60 MR+G PKEIK EYRVGLTP SVREYVAHGHEV+V+ AG GIGA D+ Y AGARI Sbjct: 1 MRVGCPKEIKNHEYRVGLTPGSVREYVAHGHEVIVESKAGAGIGADDDSYRAAGARIVPA 60 Query: 61 AEEVFSVAEMIVKVKEPQPSEWIRLREGQILFTYLHLAPDVPQTAGLIASGCTAVAYETV 120 A +VF A+M+VKVKEPQPSEW +LREGQIL+TYLHLAPD QT GL+ SG TA+AYETV Sbjct: 61 ARDVFEKADMVVKVKEPQPSEWAQLREGQILYTYLHLAPDPEQTQGLLKSGVTAIAYETV 120 Query: 121 TDAHGGLPLLAPMSEVAGRLAIEAAGAALRKSADGMGKLLGGVPGVPPARVAIIGGGVVG 180 TD GGLPLLAPMSEVAGRLAI+A +L+K+ G G LLGGVPGV PA+VAIIGGGVVG Sbjct: 121 TDERGGLPLLAPMSEVAGRLAIQAGATSLQKANGGRGILLGGVPGVLPAKVAIIGGGVVG 180 Query: 181 THAARMAAGLGSDVTILDRSLPRLRALDDLFLGRVRTRYATLEAIEQEVFAADVVIGAVL 240 HAA+MAAGLG+DV+ILDRSLPRLR LDD+F GRV TRY+T++A+E+EVF+AD+VIGAVL Sbjct: 181 LHAAKMAAGLGADVSILDRSLPRLRQLDDIFNGRVHTRYSTIDALEEEVFSADLVIGAVL 240 Query: 241 VPGASAPKLVSRAQLAGMKRRAVLVDVAIDQGGCFETSKPTTHQAPTYLVDDIVHYCVAN 300 +PGA+APKLV+R L+ MK+ AV+VDVAIDQGGCFETS TTH PTY VD IVHYCVAN Sbjct: 241 IPGAAAPKLVTREMLSAMKKGAVIVDVAIDQGGCFETSHATTHSEPTYEVDGIVHYCVAN 300 Query: 301 MPGAVPVTSSHALNHATLPFGLALAAKGLRALVEDPHLRAGLNVHRGRITNRAVAESQHL 360 MPGAVP+TS+HALN+ATL +GL LA +GL+A+ ED HLRAGLNVHRGR+TN AVAE+ Sbjct: 301 MPGAVPITSAHALNNATLHYGLQLADRGLKAIAEDRHLRAGLNVHRGRVTNVAVAEALGY 360 Query: 361 SAVMPEEAL 369 A PE L Sbjct: 361 DAHAPEVVL 369 >ref|YP_002826017.1| alanine dehydrogenase [Sinorhizobium fredii NGR234] gb|ACP25264.1| alanine dehydrogenase [Sinorhizobium fredii NGR234] Length = 372 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 261/369 (70%), Positives = 309/369 (83%) Query: 1 MRIGVPKEIKVEEYRVGLTPASVREYVAHGHEVVVQRGAGDGIGAGDEVYTQAGARIADT 60 MR+G PKEIK EYRVGLTP SVREYVAHGHEV+V+ AG GIGA D+ Y AGARI T Sbjct: 1 MRVGCPKEIKNHEYRVGLTPGSVREYVAHGHEVIVETKAGTGIGADDDAYRAAGARIVPT 60 Query: 61 AEEVFSVAEMIVKVKEPQPSEWIRLREGQILFTYLHLAPDVPQTAGLIASGCTAVAYETV 120 A++VF ++M+VKVKEPQPSEW +LR+GQIL+TYLHLAPD QT GL+ SG TAVAYETV Sbjct: 61 AKDVFEKSDMVVKVKEPQPSEWAQLRDGQILYTYLHLAPDPEQTKGLLNSGVTAVAYETV 120 Query: 121 TDAHGGLPLLAPMSEVAGRLAIEAAGAALRKSADGMGKLLGGVPGVPPARVAIIGGGVVG 180 TD GGLPLLAPMSEVAGRLAI+A +L+K+ G G LLGGVPGV PA+VAIIGGGVVG Sbjct: 121 TDERGGLPLLAPMSEVAGRLAIQAGATSLQKANGGRGILLGGVPGVLPAKVAIIGGGVVG 180 Query: 181 THAARMAAGLGSDVTILDRSLPRLRALDDLFLGRVRTRYATLEAIEQEVFAADVVIGAVL 240 H+A+MA GLG+DV+I+DRS+PRLR LDD+F GRV TRY+T++A+E+EVF+AD+VIGAVL Sbjct: 181 LHSAKMAVGLGADVSIIDRSIPRLRQLDDIFNGRVHTRYSTIDALEEEVFSADLVIGAVL 240 Query: 241 VPGASAPKLVSRAQLAGMKRRAVLVDVAIDQGGCFETSKPTTHQAPTYLVDDIVHYCVAN 300 +PGA+APKLV+R L+GMK+ AV+VDVAIDQGGCFETS TTH PTY VD IVHYCVAN Sbjct: 241 IPGAAAPKLVTREMLSGMKKGAVIVDVAIDQGGCFETSHATTHSEPTYEVDGIVHYCVAN 300 Query: 301 MPGAVPVTSSHALNHATLPFGLALAAKGLRALVEDPHLRAGLNVHRGRITNRAVAESQHL 360 MPGAVP+TS+HALN+ATL +GL LA +GL+A+ ED HLRAGLNVHRGR+TN VAE+ Sbjct: 301 MPGAVPITSAHALNNATLYYGLQLADRGLKAIAEDRHLRAGLNVHRGRVTNAPVAEALGY 360 Query: 361 SAVMPEEAL 369 + PE L Sbjct: 361 DSYAPESVL 369 >ref|YP_673989.1| L-alanine dehydrogenase [Mesorhizobium sp. BNC1] gb|ABG62824.1| L-alanine dehydrogenase [Chelativorans sp. BNC1] Length = 371 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 269/371 (72%), Positives = 315/371 (84%) Query: 1 MRIGVPKEIKVEEYRVGLTPASVREYVAHGHEVVVQRGAGDGIGAGDEVYTQAGARIADT 60 MRIG PKEIK EYRVGLTP SVREY+AHGH+V+V+ GAG GIGA D Y AGA IA + Sbjct: 1 MRIGCPKEIKNHEYRVGLTPGSVREYMAHGHDVLVETGAGAGIGADDNAYRAAGAEIAKS 60 Query: 61 AEEVFSVAEMIVKVKEPQPSEWIRLREGQILFTYLHLAPDVPQTAGLIASGCTAVAYETV 120 AE+VF+ ++MIVKVKEPQPSEW++LREGQIL+TYLHLAPD QT GL+ SG TAVAYETV Sbjct: 61 AEDVFARSDMIVKVKEPQPSEWVQLREGQILYTYLHLAPDPEQTKGLLESGVTAVAYETV 120 Query: 121 TDAHGGLPLLAPMSEVAGRLAIEAAGAALRKSADGMGKLLGGVPGVPPARVAIIGGGVVG 180 TDAHGGLPLLAPMSEVAGRLAI+A AL+K+ G G LLGGVPGV P +VAIIGGGVVG Sbjct: 121 TDAHGGLPLLAPMSEVAGRLAIQAGATALQKANGGRGVLLGGVPGVLPGKVAIIGGGVVG 180 Query: 181 THAARMAAGLGSDVTILDRSLPRLRALDDLFLGRVRTRYATLEAIEQEVFAADVVIGAVL 240 +AA+MA GLG+DVTI+DRS+PRLR LDD+F GR+ TRY+T+EAIE+E F+ADVV+GAVL Sbjct: 181 LNAAKMAVGLGADVTIIDRSIPRLRQLDDIFNGRIHTRYSTVEAIEEECFSADVVVGAVL 240 Query: 241 VPGASAPKLVSRAQLAGMKRRAVLVDVAIDQGGCFETSKPTTHQAPTYLVDDIVHYCVAN 300 +PGA+APKLV+R L+GMK+ A+LVDVAIDQGGCFETS TTH PTY VD I+HYCVAN Sbjct: 241 IPGAAAPKLVTREMLSGMKKGAILVDVAIDQGGCFETSHATTHSDPTYEVDGIIHYCVAN 300 Query: 301 MPGAVPVTSSHALNHATLPFGLALAAKGLRALVEDPHLRAGLNVHRGRITNRAVAESQHL 360 MPGAVPVTS+HALN+ATL +GL LA +GLRAL +D HLR GLNVH+GRITNRAVA+S Sbjct: 301 MPGAVPVTSAHALNNATLHYGLQLAGRGLRALADDQHLRNGLNVHKGRITNRAVADSLGY 360 Query: 361 SAVMPEEALAS 371 + P+ ALA+ Sbjct: 361 EMIEPKAALAA 371 >gb|ABC26869.1| AldA [Bradyrhizobium sp. UPM1167] Length = 370 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 271/370 (73%), Positives = 315/370 (85%) Query: 1 MRIGVPKEIKVEEYRVGLTPASVREYVAHGHEVVVQRGAGDGIGAGDEVYTQAGARIADT 60 M++GVPKEIK EYRVGLTP +VREYVA GH V+++ AG GIGA D+ Y GA I + Sbjct: 1 MKVGVPKEIKAHEYRVGLTPGAVREYVAAGHRVMIETNAGAGIGATDDDYRAVGATILAS 60 Query: 61 AEEVFSVAEMIVKVKEPQPSEWIRLREGQILFTYLHLAPDVPQTAGLIASGCTAVAYETV 120 A EVF+ +EMIVKVKEPQPSEW +LREGQILFTYLHLAPD Q GL+ SGCTA+AYETV Sbjct: 61 AGEVFASSEMIVKVKEPQPSEWSQLREGQILFTYLHLAPDPEQAKGLLKSGCTAIAYETV 120 Query: 121 TDAHGGLPLLAPMSEVAGRLAIEAAGAALRKSADGMGKLLGGVPGVPPARVAIIGGGVVG 180 TD HGGLPLLAPMSEVAGRLAIEAAG+AL++SA G G L+GGVPGV PAR+ +IGGGVVG Sbjct: 121 TDGHGGLPLLAPMSEVAGRLAIEAAGSALKRSAGGRGLLIGGVPGVQPARIVVIGGGVVG 180 Query: 181 THAARMAAGLGSDVTILDRSLPRLRALDDLFLGRVRTRYATLEAIEQEVFAADVVIGAVL 240 THAARMA GLG++VTI+DRS+PRLR LD+LF GRVRTR++T+E++E+EVFAADVVIGAVL Sbjct: 181 THAARMAVGLGAEVTIIDRSIPRLRELDELFEGRVRTRFSTIESVEEEVFAADVVIGAVL 240 Query: 241 VPGASAPKLVSRAQLAGMKRRAVLVDVAIDQGGCFETSKPTTHQAPTYLVDDIVHYCVAN 300 VPGASAPKLV R+ L+ M++ AV+VDVAIDQGGCFETS PTTH PTY VD I+HYCVAN Sbjct: 241 VPGASAPKLVRRSMLSSMRKSAVIVDVAIDQGGCFETSHPTTHADPTYEVDGIIHYCVAN 300 Query: 301 MPGAVPVTSSHALNHATLPFGLALAAKGLRALVEDPHLRAGLNVHRGRITNRAVAESQHL 360 MPGAVP+TSS ALN+ATLPFGLALA KG A++E+PHLRAGLNVHRGR+T +AVAES L Sbjct: 301 MPGAVPLTSSQALNNATLPFGLALANKGFSAVLENPHLRAGLNVHRGRLTYKAVAESLGL 360 Query: 361 SAVMPEEALA 370 E+A A Sbjct: 361 PFSPIEQAAA 370