BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0035.p (399 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767143.1| 3-isopropylmalate dehydrogenase [Bradyrhizobium... 481 e-133 ref|YP_001202552.1| 3-isopropylmalate dehydrogenase [Bradyrhizob... 475 e-132 ref|YP_001236538.1| 3-isopropylmalate dehydrogenase [Bradyrhizob... 473 e-131 ref|YP_483957.1| 3-isopropylmalate dehydrogenase [Rhodopseudomon... 464 e-128 ref|NP_945580.1| 3-isopropylmalate dehydrogenase [Rhodopseudomon... 462 e-128 >ref|NP_767143.1| 3-isopropylmalate dehydrogenase [Bradyrhizobium japonicum USDA 110] sp|Q89X19.1|LEU32_BRAJA RecName: Full=3-isopropylmalate dehydrogenase 2; AltName: Full=3-IPM-DH 2; AltName: Full=Beta-IPM dehydrogenase 2; Short=IMDH 2 dbj|BAC45768.1| 3-isopropylmalate dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 370 Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust. Identities = 230/256 (89%), Positives = 242/256 (94%) Query: 1 MATHKLLLLPGDGIGPEVMAEVQRVIDWLNAQGIAKFETEQGLVGGSAYDAHKVSISEGD 60 MATHKLLLLPGDGIGPEVM EV+R+IDWLN+ GIAKFET+ GLVGGSAYDAHKVSISEGD Sbjct: 1 MATHKLLLLPGDGIGPEVMGEVKRLIDWLNSAGIAKFETDTGLVGGSAYDAHKVSISEGD 60 Query: 61 MAKATAADAVIFGAVGGPKWDNVPYEVRPEAGLLRLRKDLGLFANLRPAVCYPALAEASS 120 MAKA AADA+IFGAVGGPKWD VPYEVRPEAGLLRLRKDLGLFANLRPAVCYPALA+ASS Sbjct: 61 MAKALAADAIIFGAVGGPKWDAVPYEVRPEAGLLRLRKDLGLFANLRPAVCYPALADASS 120 Query: 121 LKRDVVEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRAVDTQVYDTYEIERIGRVAFDL 180 LKR+ VEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRA+DTQVYDTYEIERI RVAFDL Sbjct: 121 LKREAVEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRAIDTQVYDTYEIERIARVAFDL 180 Query: 181 ARKRRNKVTSMEKRNVMKSGVLWNEVMTQVHAREYKDVTLEHQLADSGGMNLVKAPKQFD 240 A+KR+NKVTSMEKRNVMKSGVLWNEV+TQVH REY DVTLEHQLADSGGM LVK PKQFD Sbjct: 181 AKKRKNKVTSMEKRNVMKSGVLWNEVVTQVHKREYPDVTLEHQLADSGGMMLVKWPKQFD 240 Query: 241 VIVTDNLFGDMXVGLA 256 VIVTDNLFGDM +A Sbjct: 241 VIVTDNLFGDMLSDIA 256 >ref|YP_001202552.1| 3-isopropylmalate dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL74306.1| 3-isopropylmalate dehydrogenase (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) [Bradyrhizobium sp. ORS 278] Length = 370 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 227/256 (88%), Positives = 240/256 (93%) Query: 1 MATHKLLLLPGDGIGPEVMAEVQRVIDWLNAQGIAKFETEQGLVGGSAYDAHKVSISEGD 60 MATHKLLLLPGDGIGPEVMAEV+R+I WLN +G+A FETE GLVGG+AYDAH SISEGD Sbjct: 1 MATHKLLLLPGDGIGPEVMAEVKRLIGWLNGKGLASFETEDGLVGGAAYDAHGASISEGD 60 Query: 61 MAKATAADAVIFGAVGGPKWDNVPYEVRPEAGLLRLRKDLGLFANLRPAVCYPALAEASS 120 M KA AADA+IFGAVGGPKWD VPYEVRPEAGLLRLRKDLGLFANLRPAVCYPALA+ASS Sbjct: 61 MDKAKAADAIIFGAVGGPKWDGVPYEVRPEAGLLRLRKDLGLFANLRPAVCYPALADASS 120 Query: 121 LKRDVVEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRAVDTQVYDTYEIERIGRVAFDL 180 LKR++VEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRA+DTQVYDTYEIERI RVAFDL Sbjct: 121 LKREIVEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRAIDTQVYDTYEIERIARVAFDL 180 Query: 181 ARKRRNKVTSMEKRNVMKSGVLWNEVMTQVHAREYKDVTLEHQLADSGGMNLVKAPKQFD 240 ARKR+NKVTSMEKRNVMKSGVLWNEV+T VHAREYKDVTLEHQLADSGGMNLVK PK FD Sbjct: 181 ARKRKNKVTSMEKRNVMKSGVLWNEVVTAVHAREYKDVTLEHQLADSGGMNLVKYPKMFD 240 Query: 241 VIVTDNLFGDMXVGLA 256 VIVTDNLFGDM +A Sbjct: 241 VIVTDNLFGDMLSDIA 256 >ref|YP_001236538.1| 3-isopropylmalate dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ32632.1| 3-isopropylmalate dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 370 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 227/256 (88%), Positives = 239/256 (93%) Query: 1 MATHKLLLLPGDGIGPEVMAEVQRVIDWLNAQGIAKFETEQGLVGGSAYDAHKVSISEGD 60 MATHKLLLLPGDGIGPEVMAEV+R+I WLN +G+A FETE+GLVGG+AYDAH SISE D Sbjct: 1 MATHKLLLLPGDGIGPEVMAEVKRLIGWLNGKGLASFETEEGLVGGAAYDAHGASISEAD 60 Query: 61 MAKATAADAVIFGAVGGPKWDNVPYEVRPEAGLLRLRKDLGLFANLRPAVCYPALAEASS 120 M KA AADA+IFGAVGGPKWD VPYEVRPEAGLLRLRKDLGLFANLRPAVCYPALA+ASS Sbjct: 61 MDKAKAADAIIFGAVGGPKWDGVPYEVRPEAGLLRLRKDLGLFANLRPAVCYPALADASS 120 Query: 121 LKRDVVEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRAVDTQVYDTYEIERIGRVAFDL 180 LKR++VEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRAVDTQVYDTYEIERI RVAFDL Sbjct: 121 LKREIVEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRAVDTQVYDTYEIERIARVAFDL 180 Query: 181 ARKRRNKVTSMEKRNVMKSGVLWNEVMTQVHAREYKDVTLEHQLADSGGMNLVKAPKQFD 240 ARKRRNKVTSMEKRNVMKSGVLWNEV+T VH REYKDVTLEHQLADSGGMNLVK PK FD Sbjct: 181 ARKRRNKVTSMEKRNVMKSGVLWNEVVTAVHNREYKDVTLEHQLADSGGMNLVKYPKMFD 240 Query: 241 VIVTDNLFGDMXVGLA 256 VIVTDNLFGDM +A Sbjct: 241 VIVTDNLFGDMLSDIA 256 >ref|YP_483957.1| 3-isopropylmalate dehydrogenase [Rhodopseudomonas palustris HaA2] sp|Q2J3B4.1|LEU3_RHOP2 RecName: Full=3-isopropylmalate dehydrogenase; AltName: Full=3-IPM-DH; AltName: Full=Beta-IPM dehydrogenase; Short=IMDH gb|ABD05046.1| 3-isopropylmalate dehydrogenase [Rhodopseudomonas palustris HaA2] Length = 370 Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust. Identities = 224/256 (87%), Positives = 236/256 (92%) Query: 1 MATHKLLLLPGDGIGPEVMAEVQRVIDWLNAQGIAKFETEQGLVGGSAYDAHKVSISEGD 60 MATHKLLLLPGDGIG EVMAEV R+IDWLN GIA FETE GLVGG+AYDA KV+I++ Sbjct: 1 MATHKLLLLPGDGIGTEVMAEVSRLIDWLNKAGIASFETEHGLVGGAAYDADKVAITDAT 60 Query: 61 MAKATAADAVIFGAVGGPKWDNVPYEVRPEAGLLRLRKDLGLFANLRPAVCYPALAEASS 120 MA A A+DAVIFGAVGGPKWD VPY+ RPEAGLLRLRKDL LFANLRPAVCYPALAEASS Sbjct: 61 MALAQASDAVIFGAVGGPKWDAVPYDARPEAGLLRLRKDLALFANLRPAVCYPALAEASS 120 Query: 121 LKRDVVEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRAVDTQVYDTYEIERIGRVAFDL 180 LK +VVEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRA+DTQVYDTYEIERIGRVAFDL Sbjct: 121 LKPEVVEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRAIDTQVYDTYEIERIGRVAFDL 180 Query: 181 ARKRRNKVTSMEKRNVMKSGVLWNEVMTQVHAREYKDVTLEHQLADSGGMNLVKAPKQFD 240 ARKRRNKVTSMEKRNVMK+GVLWNEV+TQVHAREYKDV LEHQLADSGGMNLVK PKQFD Sbjct: 181 ARKRRNKVTSMEKRNVMKTGVLWNEVITQVHAREYKDVQLEHQLADSGGMNLVKWPKQFD 240 Query: 241 VIVTDNLFGDMXVGLA 256 VIVTDNLFGDM +A Sbjct: 241 VIVTDNLFGDMLSDIA 256 >ref|NP_945580.1| 3-isopropylmalate dehydrogenase [Rhodopseudomonas palustris CGA009] ref|YP_001989262.1| 3-isopropylmalate dehydrogenase [Rhodopseudomonas palustris TIE-1] sp|Q6ND82.1|LEU3_RHOPA RecName: Full=3-isopropylmalate dehydrogenase; AltName: Full=3-IPM-DH; AltName: Full=Beta-IPM dehydrogenase; Short=IMDH emb|CAE25671.1| beta-isopropylmalate dehydrogenase [Rhodopseudomonas palustris CGA009] gb|ACE98786.1| 3-isopropylmalate dehydrogenase [Rhodopseudomonas palustris TIE-1] Length = 370 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 223/256 (87%), Positives = 236/256 (92%) Query: 1 MATHKLLLLPGDGIGPEVMAEVQRVIDWLNAQGIAKFETEQGLVGGSAYDAHKVSISEGD 60 MATHKLLLLPGDGIG EVMAEV R+IDWLN GIA FETE GLVGG+AYDA KV+I++ Sbjct: 1 MATHKLLLLPGDGIGTEVMAEVSRLIDWLNKAGIASFETEHGLVGGAAYDADKVAITDAT 60 Query: 61 MAKATAADAVIFGAVGGPKWDNVPYEVRPEAGLLRLRKDLGLFANLRPAVCYPALAEASS 120 MA A A+DAVIFGAVGGPKWD VPY+ RPEAGLLRLRKDLGLFANLRPAVCYPALA++SS Sbjct: 61 MALAQASDAVIFGAVGGPKWDGVPYDARPEAGLLRLRKDLGLFANLRPAVCYPALADSSS 120 Query: 121 LKRDVVEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRAVDTQVYDTYEIERIGRVAFDL 180 LKRDVVEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRAVDTQVYDTYEIERIGRVAFDL Sbjct: 121 LKRDVVEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRAVDTQVYDTYEIERIGRVAFDL 180 Query: 181 ARKRRNKVTSMEKRNVMKSGVLWNEVMTQVHAREYKDVTLEHQLADSGGMNLVKAPKQFD 240 ARKRRNKVTSMEKRNVMK+GVLWNEV+T VH REYKDV L+HQLADSGGMNLVK PKQFD Sbjct: 181 ARKRRNKVTSMEKRNVMKTGVLWNEVITAVHDREYKDVQLDHQLADSGGMNLVKWPKQFD 240 Query: 241 VIVTDNLFGDMXVGLA 256 VIVTDNLFGDM +A Sbjct: 241 VIVTDNLFGDMLSDIA 256