BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0029.p (292 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001202558.1| putative citrate lyase beta chain [Bradyrhiz... 474 e-132 ref|YP_567635.1| Citryl-CoA lyase [Rhodopseudomonas palustris Bi... 471 e-131 ref|YP_779279.1| Citryl-CoA lyase [Rhodopseudomonas palustris Bi... 465 e-129 ref|YP_530127.1| Citryl-CoA lyase [Rhodopseudomonas palustris Bi... 459 e-127 ref|YP_001236544.1| putative citrate lyase beta chain [Bradyrhiz... 444 e-123 >ref|YP_001202558.1| putative citrate lyase beta chain [Bradyrhizobium sp. ORS 278] emb|CAL74312.1| putative citrate lyase beta chain (Citrase beta chain) (Citrate (pro-3S)-lyase beta chain) (Citryl-CoA lyase subunit) (citE) [Bradyrhizobium sp. ORS 278] Length = 292 Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust. Identities = 227/292 (77%), Positives = 256/292 (87%) Query: 1 MTRPRRSLLFMPGSNARALEKARTLAADGIILDLEDSVAPDAKATAREQIAKAVAAKGFG 60 M RPRRSLLFMPGSNARALEK R L ADG+ILDLEDSVAPD KA AREQIAKAVAA G+G Sbjct: 1 MIRPRRSLLFMPGSNARALEKGRNLPADGLILDLEDSVAPDVKAAAREQIAKAVAADGYG 60 Query: 61 KREVLIRINALDTPWWVDDISMAGKAQPDGILVPKISTVDDLNAVADRLSDINAPASIRV 120 KRE+LIRIN+LDTPWW DD++MAG+ DGILVPK+STV DL V++RL+++ A +++V Sbjct: 61 KRELLIRINSLDTPWWSDDVAMAGQTATDGILVPKVSTVADLRTVSNRLAEVGADPALKV 120 Query: 121 WAMIETARAVLDADKLAAASKDSETRLAGFVFGPNDIARETRIRMKPGRAAMIPMITHCI 180 WAMIETARAVLDAD LAA ++ +RLAGFVFGPNDI+RETRIRM PGRA M+PMI+HC+ Sbjct: 121 WAMIETARAVLDADLLAATVHEAGSRLAGFVFGPNDISRETRIRMVPGRATMLPMISHCV 180 Query: 181 LATRAHGLEILDGPYGDISNVDGFAEECAQGRDLGFDGKTLIHPSHIDACNAIFTPPEAE 240 LATRAHGLEILDGPY D +N DGFA+EC Q RDLGFDGKTLIHP IDACNAIFTPP E Sbjct: 181 LATRAHGLEILDGPYSDFANTDGFAQECIQARDLGFDGKTLIHPGQIDACNAIFTPPAVE 240 Query: 241 VAEARKIIAAFEKPENASRGAIQLDGRMVERLHAEMAKRTIAIADAIAAMRQ 292 +AEARKI+AAFE PENASRGAIQ+DGRMVERLHAEMAKRTIAIADAIA M + Sbjct: 241 IAEARKILAAFELPENASRGAIQIDGRMVERLHAEMAKRTIAIADAIAEMTK 292 >ref|YP_567635.1| Citryl-CoA lyase [Rhodopseudomonas palustris BisB5] gb|ABE37734.1| Citryl-CoA lyase [Rhodopseudomonas palustris BisB5] Length = 292 Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust. Identities = 226/290 (77%), Positives = 256/290 (88%) Query: 1 MTRPRRSLLFMPGSNARALEKARTLAADGIILDLEDSVAPDAKATAREQIAKAVAAKGFG 60 M RPRRSLLFMPGSNARALEKAR L DG+ILDLEDSVAP+AKA AR+QI +AVAAKG+G Sbjct: 1 MIRPRRSLLFMPGSNARALEKARLLPVDGLILDLEDSVAPEAKAQARDQIGQAVAAKGYG 60 Query: 61 KREVLIRINALDTPWWVDDISMAGKAQPDGILVPKISTVDDLNAVADRLSDINAPASIRV 120 +REVL+RINALD+PWW+DDI+MA K +PDGILVPK+S+V DL+A+ADRLSD+NA SIRV Sbjct: 61 RREVLVRINALDSPWWLDDIAMAAKVKPDGILVPKVSSVQDLSAIADRLSDLNADMSIRV 120 Query: 121 WAMIETARAVLDADKLAAASKDSETRLAGFVFGPNDIARETRIRMKPGRAAMIPMITHCI 180 W MIET+R VL A++LAA DSETRLAGFVFGPNDI+RET IRM PGR AMIPMITHCI Sbjct: 121 WIMIETSRGVLHAEELAAQVHDSETRLAGFVFGPNDISRETGIRMLPGRTAMIPMITHCI 180 Query: 181 LATRAHGLEILDGPYGDISNVDGFAEECAQGRDLGFDGKTLIHPSHIDACNAIFTPPEAE 240 LA R HGL +LDGPY DI++VDGFA ECAQ RDLGFDGKTLIHP I+ACNA FTPP + Sbjct: 181 LAARVHGLTVLDGPYSDIASVDGFALECAQARDLGFDGKTLIHPGQIEACNAAFTPPPED 240 Query: 241 VAEARKIIAAFEKPENASRGAIQLDGRMVERLHAEMAKRTIAIADAIAAM 290 VA+ARKIIAAFE+PENA RGAIQLDGRMVERLHAE+AK+TIAIADA+ M Sbjct: 241 VAQARKIIAAFERPENAGRGAIQLDGRMVERLHAEIAKKTIAIADAVETM 290 >ref|YP_779279.1| Citryl-CoA lyase [Rhodopseudomonas palustris BisA53] gb|ABJ04299.1| Citryl-CoA lyase [Rhodopseudomonas palustris BisA53] Length = 292 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 221/287 (77%), Positives = 254/287 (88%) Query: 1 MTRPRRSLLFMPGSNARALEKARTLAADGIILDLEDSVAPDAKATAREQIAKAVAAKGFG 60 M RPRRSLLFMPGSNARALEKAR L ADG+ILDLED+VAPDAKATAR Q+A+A+A GFG Sbjct: 1 MIRPRRSLLFMPGSNARALEKARLLPADGVILDLEDAVAPDAKATARTQVAQALAEGGFG 60 Query: 61 KREVLIRINALDTPWWVDDISMAGKAQPDGILVPKISTVDDLNAVADRLSDINAPASIRV 120 +REVL+RINALD+PWW+DD++MAGKA+PDGILVPK+S+V DL A+ADRL+DI A +IRV Sbjct: 61 RREVLVRINALDSPWWIDDLTMAGKARPDGILVPKVSSVADLTAIADRLTDIGADMAIRV 120 Query: 121 WAMIETARAVLDADKLAAASKDSETRLAGFVFGPNDIARETRIRMKPGRAAMIPMITHCI 180 W MIETAR VL A++LAA + D+E RLAGFVFGPNDI+RET IRM PGR+ M+PMI+HC+ Sbjct: 121 WIMIETARGVLRAEELAAQAHDAEMRLAGFVFGPNDISRETGIRMLPGRSTMLPMISHCV 180 Query: 181 LATRAHGLEILDGPYGDISNVDGFAEECAQGRDLGFDGKTLIHPSHIDACNAIFTPPEAE 240 LA R+HGL ILDGP+ D +NVDGFA+ECAQ RD GFDGKTLIHP IDACNA FTPP E Sbjct: 181 LAARSHGLAILDGPFSDFANVDGFAQECAQARDFGFDGKTLIHPGQIDACNATFTPPAEE 240 Query: 241 VAEARKIIAAFEKPENASRGAIQLDGRMVERLHAEMAKRTIAIADAI 287 V +ARKIIAAF KPENASRGAIQLDGRMVERLHAE+AK+TIAIADAI Sbjct: 241 VEQARKIIAAFAKPENASRGAIQLDGRMVERLHAEIAKKTIAIADAI 287 >ref|YP_530127.1| Citryl-CoA lyase [Rhodopseudomonas palustris BisB18] gb|ABD85808.1| Citryl-CoA lyase [Rhodopseudomonas palustris BisB18] Length = 292 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 217/280 (77%), Positives = 250/280 (89%) Query: 1 MTRPRRSLLFMPGSNARALEKARTLAADGIILDLEDSVAPDAKATAREQIAKAVAAKGFG 60 M RPRRSLLFMPGSNARALEKAR L ADG+ILDLEDSVAPDAKATAR QIAKAV KGFG Sbjct: 1 MIRPRRSLLFMPGSNARALEKARLLHADGLILDLEDSVAPDAKATARAQIAKAVGDKGFG 60 Query: 61 KREVLIRINALDTPWWVDDISMAGKAQPDGILVPKISTVDDLNAVADRLSDINAPASIRV 120 KREVLIRIN+LD+PWW+DD++MAGKA+PDGILVPK+S+V +L+A+ADRL+D+ A +I+V Sbjct: 61 KREVLIRINSLDSPWWIDDLNMAGKAKPDGILVPKVSSVAELSAIADRLTDVGAEIAIKV 120 Query: 121 WAMIETARAVLDADKLAAASKDSETRLAGFVFGPNDIARETRIRMKPGRAAMIPMITHCI 180 W MIETAR VL A++LAAAS+DSE RLAGFVFGPNDI+RET IRM PGR+AM+PM+THC+ Sbjct: 121 WIMIETARGVLHAEELAAASQDSEMRLAGFVFGPNDISRETGIRMLPGRSAMVPMMTHCV 180 Query: 181 LATRAHGLEILDGPYGDISNVDGFAEECAQGRDLGFDGKTLIHPSHIDACNAIFTPPEAE 240 LA R+HGL ILDGPY DI N++GFA ECAQ RDLGFDGKTLIHP IDACNA FTPP + Sbjct: 181 LAARSHGLAILDGPYSDIGNIEGFAHECAQARDLGFDGKTLIHPGQIDACNAAFTPPAED 240 Query: 241 VAEARKIIAAFEKPENASRGAIQLDGRMVERLHAEMAKRT 280 VA ARK+IAAF +PENA+RGAIQLDGRMVERLH +MAK+T Sbjct: 241 VAYARKVIAAFAEPENAARGAIQLDGRMVERLHVDMAKKT 280 >ref|YP_001236544.1| putative citrate lyase beta chain [Bradyrhizobium sp. BTAi1] gb|ABQ32638.1| putative citrate lyase beta chain [Bradyrhizobium sp. BTAi1] Length = 292 Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust. Identities = 219/280 (78%), Positives = 248/280 (88%) Query: 1 MTRPRRSLLFMPGSNARALEKARTLAADGIILDLEDSVAPDAKATAREQIAKAVAAKGFG 60 M RPRRSLLFMPGSNARALEK R L ADG+ILDLEDSVAPDAKA AREQIAKAVAA G+G Sbjct: 1 MIRPRRSLLFMPGSNARALEKGRNLPADGLILDLEDSVAPDAKAAAREQIAKAVAADGYG 60 Query: 61 KREVLIRINALDTPWWVDDISMAGKAQPDGILVPKISTVDDLNAVADRLSDINAPASIRV 120 KRE+LIRIN+LDT WW DD++MAG+A DGILVPK+STV+DL V+DRL+++ A +++V Sbjct: 61 KRELLIRINSLDTAWWADDVAMAGQAATDGILVPKVSTVEDLRLVSDRLAEVGADPALKV 120 Query: 121 WAMIETARAVLDADKLAAASKDSETRLAGFVFGPNDIARETRIRMKPGRAAMIPMITHCI 180 WAMIETARAVLDAD+LAA ++ +RLAGFVFGPNDI+RETRIRM PGRA M+PMI+HCI Sbjct: 121 WAMIETARAVLDADRLAATVHEAGSRLAGFVFGPNDISRETRIRMLPGRATMLPMISHCI 180 Query: 181 LATRAHGLEILDGPYGDISNVDGFAEECAQGRDLGFDGKTLIHPSHIDACNAIFTPPEAE 240 LATRAHGLEILDGPY D +N DGFA+EC Q RDLGFDGKTLIHP IDACNAIFTPP E Sbjct: 181 LATRAHGLEILDGPYSDFANTDGFAQECIQARDLGFDGKTLIHPGQIDACNAIFTPPAEE 240 Query: 241 VAEARKIIAAFEKPENASRGAIQLDGRMVERLHAEMAKRT 280 VA AR+IIAAFE PENASRGAIQ+DGRMVERLHA+MA+RT Sbjct: 241 VAAARRIIAAFELPENASRGAIQIDGRMVERLHADMARRT 280