BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0041.0013.p         (126 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767127.1| 50S ribosomal protein L19 [Bradyrhizobium japon...   239   7e-62
ref|YP_001202569.1| 50S ribosomal protein L19 [Bradyrhizobium sp...   231   2e-59
ref|YP_578771.1| 50S ribosomal protein L19 [Nitrobacter hamburge...   231   4e-59
ref|ZP_01045445.1| 50S ribosomal protein L19 [Nitrobacter sp. Nb...   230   5e-59
ref|YP_001236557.1| 50S ribosomal protein L19 [Bradyrhizobium sp...   230   6e-59

>ref|NP_767127.1| 50S ribosomal protein L19 [Bradyrhizobium japonicum USDA 110]
 sp|Q89X35.1|RL19_BRAJA RecName: Full=50S ribosomal protein L19
 dbj|BAC45752.1| 50S ribosomal protein L19 [Bradyrhizobium japonicum USDA 110]
          Length = 126

 Score =  239 bits (611), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 119/126 (94%), Positives = 123/126 (97%)

Query: 1   MNLIQQLEKEQFDKLAATKDIPEFGPGDTVIVNVKVVEGERTRVQAYEGVCIGRSGQGLN 60
           MNLI+QLE+EQFDKL+A KDIPEFGPGDTVIVNVKVVEG+RTRVQAYEGVCIGRSG GLN
Sbjct: 1   MNLIKQLEQEQFDKLSAGKDIPEFGPGDTVIVNVKVVEGDRTRVQAYEGVCIGRSGGGLN 60

Query: 61  ESFTVRKISYGEGVERVFPVMSPMIDSIKVVRRGKVRRAKLYYLRNLRGKSARIVEKQDR 120
           ESFTVRKISYGEGVERVFPVMSPMIDSIKVVRRGKVRRAKLYYLRNLRGKSARIVEKQDR
Sbjct: 61  ESFTVRKISYGEGVERVFPVMSPMIDSIKVVRRGKVRRAKLYYLRNLRGKSARIVEKQDR 120

Query: 121 QTAVGE 126
           Q AVGE
Sbjct: 121 QAAVGE 126


>ref|YP_001202569.1| 50S ribosomal protein L19 [Bradyrhizobium sp. ORS 278]
 sp|A4YK97.1|RL19_BRASO RecName: Full=50S ribosomal protein L19
 emb|CAL74323.1| 50S ribosomal protein L19 [Bradyrhizobium sp. ORS 278]
          Length = 128

 Score =  231 bits (590), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 114/125 (91%), Positives = 118/125 (94%)

Query: 1   MNLIQQLEKEQFDKLAATKDIPEFGPGDTVIVNVKVVEGERTRVQAYEGVCIGRSGQGLN 60
           MNLIQQLEKEQFDKL+A K IPEFGPGDTVIVNVKVVEGERTRVQAYEGVCIGRSG G+N
Sbjct: 1   MNLIQQLEKEQFDKLSANKTIPEFGPGDTVIVNVKVVEGERTRVQAYEGVCIGRSGGGIN 60

Query: 61  ESFTVRKISYGEGVERVFPVMSPMIDSIKVVRRGKVRRAKLYYLRNLRGKSARIVEKQDR 120
           ESFTVRKISYGEGVERVFP++SPMIDSIKVVRRGKVRRAKLYYLR LRGKSARIVEKQDR
Sbjct: 61  ESFTVRKISYGEGVERVFPILSPMIDSIKVVRRGKVRRAKLYYLRQLRGKSARIVEKQDR 120

Query: 121 QTAVG 125
           Q A  
Sbjct: 121 QQAAA 125


>ref|YP_578771.1| 50S ribosomal protein L19 [Nitrobacter hamburgensis X14]
 sp|Q1QHI6.1|RL19_NITHX RecName: Full=50S ribosomal protein L19
 gb|ABE64311.1| LSU ribosomal protein L19P [Nitrobacter hamburgensis X14]
          Length = 126

 Score =  231 bits (588), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 116/124 (93%), Positives = 119/124 (95%), Gaps = 1/124 (0%)

Query: 1   MNLIQQLEKEQFDKLAATKDIPEFGPGDTVIVNVKVVEGERTRVQAYEGVCIGRSGQGLN 60
           MN+IQQLEKEQFDKL+ATK IPEFGPGDTVIVNVKVVEGERTRVQAYEGVCIGRSG GLN
Sbjct: 1   MNIIQQLEKEQFDKLSATKTIPEFGPGDTVIVNVKVVEGERTRVQAYEGVCIGRSGGGLN 60

Query: 61  ESFTVRKISYGEGVERVFPVMSPMIDSIKVVRRGKVRRAKLYYLRNLRGKSARIVEKQ-D 119
           ESFTVRKISYGEGVERVFPVMSPMIDSIKVVRRGKVRRAKLYYLRNLRGKSARIVEK+ D
Sbjct: 61  ESFTVRKISYGEGVERVFPVMSPMIDSIKVVRRGKVRRAKLYYLRNLRGKSARIVEKKTD 120

Query: 120 RQTA 123
           R  A
Sbjct: 121 RAAA 124


>ref|ZP_01045445.1| 50S ribosomal protein L19 [Nitrobacter sp. Nb-311A]
 gb|EAQ36773.1| 50S ribosomal protein L19 [Nitrobacter sp. Nb-311A]
          Length = 135

 Score =  230 bits (587), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 113/121 (93%), Positives = 118/121 (97%)

Query: 1   MNLIQQLEKEQFDKLAATKDIPEFGPGDTVIVNVKVVEGERTRVQAYEGVCIGRSGQGLN 60
           MN+IQQLEKEQFDKL+ATK IPEFGPGDTVIVNVKVVEGERTRVQAYEGVCIGRSG GLN
Sbjct: 5   MNIIQQLEKEQFDKLSATKTIPEFGPGDTVIVNVKVVEGERTRVQAYEGVCIGRSGGGLN 64

Query: 61  ESFTVRKISYGEGVERVFPVMSPMIDSIKVVRRGKVRRAKLYYLRNLRGKSARIVEKQDR 120
           ESFTVRKISYGEGVERVFP++SPMIDSIKVVRRGKVRRAKLYYLR LRGKSARIVEKQD+
Sbjct: 65  ESFTVRKISYGEGVERVFPLLSPMIDSIKVVRRGKVRRAKLYYLRKLRGKSARIVEKQDK 124

Query: 121 Q 121
           Q
Sbjct: 125 Q 125


>ref|YP_001236557.1| 50S ribosomal protein L19 [Bradyrhizobium sp. BTAi1]
 sp|A5E907.1|RL19_BRASB RecName: Full=50S ribosomal protein L19
 gb|ABQ32651.1| LSU ribosomal protein L19P [Bradyrhizobium sp. BTAi1]
          Length = 127

 Score =  230 bits (586), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 113/123 (91%), Positives = 118/123 (95%)

Query: 1   MNLIQQLEKEQFDKLAATKDIPEFGPGDTVIVNVKVVEGERTRVQAYEGVCIGRSGQGLN 60
           MNLIQQLEKEQFDKL+A K IPEFGPGDTVIVNVKVVEG+RTRVQAYEGVCIGRSG G+N
Sbjct: 1   MNLIQQLEKEQFDKLSANKTIPEFGPGDTVIVNVKVVEGDRTRVQAYEGVCIGRSGGGIN 60

Query: 61  ESFTVRKISYGEGVERVFPVMSPMIDSIKVVRRGKVRRAKLYYLRNLRGKSARIVEKQDR 120
           ESFTVRKISYGEGVERVFP++SPMIDSIKVVRRGKVRRAKLYYLR LRGKSARIVEKQDR
Sbjct: 61  ESFTVRKISYGEGVERVFPILSPMIDSIKVVRRGKVRRAKLYYLRQLRGKSARIVEKQDR 120

Query: 121 QTA 123
           Q A
Sbjct: 121 QQA 123