BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0041.0009.p (401 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767125.1| hypothetical protein blr0485 [Bradyrhizobium ja... 551 e-155 ref|YP_002360528.1| major facilitator superfamily protein [Methy... 469 e-130 ref|YP_373428.1| major facilitator transporter [Burkholderia sp.... 452 e-125 ref|YP_001816119.1| major facilitator transporter [Burkholderia ... 447 e-123 ref|YP_004349343.1| major facilitator transporter [Burkholderia ... 442 e-122 >ref|NP_767125.1| hypothetical protein blr0485 [Bradyrhizobium japonicum USDA 110] dbj|BAC45750.1| blr0485 [Bradyrhizobium japonicum USDA 110] Length = 407 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 309/383 (80%), Positives = 349/383 (91%), Gaps = 1/383 (0%) Query: 15 ARSTRTLTVTGLNHALHDGYTDVIYVLLPVWQAEFALSYGLLALLRGLYAGAMAGLQIPV 74 ++ RTL TG+NHALHDGYTD+IYVLLPVWQAEFALSYGLLA++RGLY+GAMAGLQIPV Sbjct: 23 SKPRRTLAATGINHALHDGYTDLIYVLLPVWQAEFALSYGLLAVMRGLYSGAMAGLQIPV 82 Query: 75 GRIAERIDGKIILIAGTALSALGYAFAGFSGGVIGLGLALALSGAGSSTQHPIASAAVSR 134 GR+AERIDGKI+L GT L+ALGY AG SGGV+GLGLAL +SGAGSSTQHP+ASAAVSR Sbjct: 83 GRLAERIDGKILLALGTLLAALGYVLAGLSGGVMGLGLALLISGAGSSTQHPLASAAVSR 142 Query: 135 AYGTAARGPLGVYNFSGDLGKAAIPALTSILLVIMSWRHTLLVLAFAGLLVAVCIALWMP 194 AYG AARGPLG+YNFSGDLGKAA+PALT++LLVIMSWRH LL++A GL+VA+C+A+ MP Sbjct: 143 AYGKAARGPLGIYNFSGDLGKAALPALTAVLLVIMSWRHALLLVALMGLVVALCLAVLMP 202 Query: 195 SVGKGAEHKATSASRGASTG-GGFRWLLAIGILDTAVRMGFLTFLPFLLRDKGASLPTNG 253 +VGKG HK+ ++G G GGF WLLAIGILD+AVRMGFLTFLPFLLRDKGASLPT+G Sbjct: 203 AVGKGFAHKSAVTTQGTHAGRGGFSWLLAIGILDSAVRMGFLTFLPFLLRDKGASLPTSG 262 Query: 254 LALALVFIGGAAGKFTCGWLGERVGTLRTVLITEGGTAALIAAVLALPLAPAIVLLPLLG 313 ALA+VFIGGAAGKFTCGWLGERVGT+RTVL+TEGGTAALI AVLALPL PAI++LPLLG Sbjct: 263 FALAMVFIGGAAGKFTCGWLGERVGTIRTVLLTEGGTAALILAVLALPLIPAIIVLPLLG 322 Query: 314 VMLNGTSSVLYGTVPELTPAHQTERAFALFYTGTIGSGAIAPVLYGLLGDALGPTLATAA 373 VMLNGTSSVLYGTVPELT H+TERAFALFYTGTIGSGAIAPVLYGLLGDA+GPTLATAA Sbjct: 323 VMLNGTSSVLYGTVPELTSPHRTERAFALFYTGTIGSGAIAPVLYGLLGDAVGPTLATAA 382 Query: 374 TALTALAICPLAVALARHLADDQ 396 TA+TALAICPLA+ LA HL +D+ Sbjct: 383 TAVTALAICPLALVLASHLPNDR 405 >ref|YP_002360528.1| major facilitator superfamily protein [Methylocella silvestris BL2] gb|ACK49166.1| major facilitator superfamily MFS_1 [Methylocella silvestris BL2] Length = 401 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 273/381 (71%), Positives = 310/381 (81%), Gaps = 3/381 (0%) Query: 12 PDRARSTRTLTVTGLNHALHDGYTDVIYVLLPVWQAEFALSYGLLALLRGLYAGAMAGLQ 71 P AR RTL V G HALHDGYTD+IY+LLPVWQAEFAL +G+LALLR LYA +MA LQ Sbjct: 19 PSGAR--RTLAVAGTAHALHDGYTDLIYILLPVWQAEFALGFGMLALLRALYAASMAALQ 76 Query: 72 IPVGRIAERIDGKIILIAGTALSALGYAFAGFSGGVIGLGLALALSGAGSSTQHPIASAA 131 +PVGR+AER DG+IIL GTALS +GYA AG SGG++GL LALSGAGSSTQHPIASAA Sbjct: 77 VPVGRLAERWDGRIILALGTALSGIGYALAGASGGLLGLCAGLALSGAGSSTQHPIASAA 136 Query: 132 VSRAYGTAARGPLGVYNFSGDLGKAAIPALTSILLVIMSWRHTLLVLAFAGLLVAVCIAL 191 VSRAYG A+RGPLGVYNFSGDLGKAAIPALTS+LL+ MSWRH L +LA G A+ IA Sbjct: 137 VSRAYGKASRGPLGVYNFSGDLGKAAIPALTSLLLIFMSWRHALWLLALIGAATAIAIAA 196 Query: 192 WMPSVGKGAEHKATSASRGASTGGGFRWLLAIGILDTAVRMGFLTFLPFLLRDKGASLPT 251 +MP + G++ RG S GGF L AIG+LDT VRMGFLTFLPF+L+ GASLPT Sbjct: 197 FMPPIAGGSKAGDRREQRG-SGRGGFPLLFAIGVLDTGVRMGFLTFLPFILKAHGASLPT 255 Query: 252 NGLALALVFIGGAAGKFTCGWLGERVGTLRTVLITEGGTAALIAAVLALPLAPAIVLLPL 311 G+ALALVFIGGAAGKFTCGWLG R+G LRTVL+TEGGTAA I AVL LPL +VLLPL Sbjct: 256 VGVALALVFIGGAAGKFTCGWLGARIGVLRTVLLTEGGTAAAILAVLILPLPAILVLLPL 315 Query: 312 LGVMLNGTSSVLYGTVPELTPAHQTERAFALFYTGTIGSGAIAPVLYGLLGDALGPTLAT 371 LG+MLNGTSSVLYGTVPELTP H+ ERAFALFYTGTIGSGA++P+ YG+LGDA+G A Sbjct: 316 LGIMLNGTSSVLYGTVPELTPPHRVERAFALFYTGTIGSGAVSPIFYGVLGDAVGANWAV 375 Query: 372 AATALTALAICPLAVALARHL 392 ATA+ AL+I PLA+ALA HL Sbjct: 376 VATAMVALSIFPLALALAPHL 396 >ref|YP_373428.1| major facilitator transporter [Burkholderia sp. 383] gb|ABB12784.1| Major facilitator superfamily (MFS_1) transporter [Burkholderia sp. 383] Length = 403 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 249/395 (63%), Positives = 304/395 (76%), Gaps = 10/395 (2%) Query: 6 ETGTTRPDRARSTRTLTVTGLNHALHDGYTDVIYVLLPVWQAEFALSYGLLALLRGLYAG 65 ET +RP R L ++ + HA+HDGYTD+IY LLP+WQ++F L + LA+LRG+YAG Sbjct: 13 ETAPSRP------RVLWLSCIAHAVHDGYTDMIYALLPIWQSDFGLDFAALAILRGIYAG 66 Query: 66 AMAGLQIPVGRIAERIDGKIILIAGTALSALGYAFAGFSGGVIGLGLALALSGAGSSTQH 125 AMA LQ+P GR+A+R+ ++IL GT L+ALGYA AG SGG++GL +ALA+SG GSSTQH Sbjct: 67 AMATLQLPAGRLAQRLGSRVILAIGTLLAALGYAIAGMSGGLLGLSVALAISGGGSSTQH 126 Query: 126 PIASAAVSRAYGTAARGPLGVYNFSGDLGKAAIPALTSILLVIMSWRHTLLVLAFAGLLV 185 PIAS A+SRAYG ARGPL VYNFSGDLGK+A+PA S+L+ +M WRH L +++ G +V Sbjct: 127 PIASGAISRAYGRDARGPLSVYNFSGDLGKSALPAAISLLVTMMPWRHALWIVSGLGFVV 186 Query: 186 AVCIALWMPSV----GKGAEHKATSASRGASTGGGFRWLLAIGILDTAVRMGFLTFLPFL 241 A IA+ P V GK A + +SA RG + G GF L +IG+LDTAVRMG LTFLPFL Sbjct: 187 AAVIAVSFPDVRRDAGKAAVKEQSSAQRGGTWGRGFSALFSIGVLDTAVRMGLLTFLPFL 246 Query: 242 LRDKGASLPTNGLALALVFIGGAAGKFTCGWLGERVGTLRTVLITEGGTAALIAAVLALP 301 L KG S G ALALVFIGGAAGKF CGWLG R+G +RTVL+TEGGTAA I AV+ LP Sbjct: 247 LTAKGVSPQMVGTALALVFIGGAAGKFMCGWLGARLGVVRTVLLTEGGTAACIVAVMYLP 306 Query: 302 LAPAIVLLPLLGVMLNGTSSVLYGTVPELTPAHQTERAFALFYTGTIGSGAIAPVLYGLL 361 L P++VLLP+LG+MLNGTSSVLYGTVPE++ +TERAFALFYTGTI SGAI+PVLYG L Sbjct: 307 LGPSMVLLPILGMMLNGTSSVLYGTVPEMSAPERTERAFALFYTGTIASGAISPVLYGFL 366 Query: 362 GDALGPTLATAATALTALAICPLAVALARHLADDQ 396 GD++G AT ATA TALAI PL +AL HLADD+ Sbjct: 367 GDSIGVHGATYATAFTALAIFPLVLALRPHLADDK 401 >ref|YP_001816119.1| major facilitator transporter [Burkholderia ambifaria MC40-6] gb|ACB68566.1| major facilitator superfamily MFS_1 [Burkholderia ambifaria MC40-6] Length = 403 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 245/391 (62%), Positives = 295/391 (75%), Gaps = 4/391 (1%) Query: 10 TRPDRARSTRTLTVTGLNHALHDGYTDVIYVLLPVWQAEFALSYGLLALLRGLYAGAMAG 69 TR R L ++ + HA+HDGYTD+IY LLPVWQ+EF L + LA+LRGLYAG MA Sbjct: 11 TRDAVPSRPRVLWLSCIAHAIHDGYTDMIYALLPVWQSEFGLDFAALAILRGLYAGTMAA 70 Query: 70 LQIPVGRIAERIDGKIILIAGTALSALGYAFAGFSGGVIGLGLALALSGAGSSTQHPIAS 129 LQ+P GR+A+R+ + +L GT L+ALGYA AG SGG++GL +ALA+SG GSSTQHPIAS Sbjct: 71 LQLPAGRLAQRLGSRAVLAIGTLLAALGYAIAGMSGGLLGLCVALAISGGGSSTQHPIAS 130 Query: 130 AAVSRAYGTAARGPLGVYNFSGDLGKAAIPALTSILLVIMSWRHTLLVLAFAGLLVAVCI 189 A+SR YG ARGPL +YNFSGDLGK+A+PA S+L+ +M WRH L V+A G + A I Sbjct: 131 GAISRTYGRDARGPLSLYNFSGDLGKSALPAAISLLVTMMPWRHALWVVAGLGCVAAAGI 190 Query: 190 ALWMPSV----GKGAEHKATSASRGASTGGGFRWLLAIGILDTAVRMGFLTFLPFLLRDK 245 A+W P+V GK A + SA RG++ G GF L +IG+LDTA+RMG LTFLPFLL K Sbjct: 191 AVWFPAVPRGAGKTAAKEQASAQRGSTQGRGFNALFSIGVLDTAIRMGLLTFLPFLLNAK 250 Query: 246 GASLPTNGLALALVFIGGAAGKFTCGWLGERVGTLRTVLITEGGTAALIAAVLALPLAPA 305 G S G ALALVFIGGAAGKF CGWLG R+G +RTVL+TEGGTAA I V+ LPLA Sbjct: 251 GISPQLLGTALALVFIGGAAGKFFCGWLGARMGVVRTVLLTEGGTAACIIGVMYLPLALT 310 Query: 306 IVLLPLLGVMLNGTSSVLYGTVPELTPAHQTERAFALFYTGTIGSGAIAPVLYGLLGDAL 365 +VLLP+LG+MLNGTSSVLYGTVPE++P +TERAFA+FYTGTI SGAI+PVLYG LGD + Sbjct: 311 MVLLPILGMMLNGTSSVLYGTVPEMSPPERTERAFAIFYTGTIASGAISPVLYGFLGDRI 370 Query: 366 GPTLATAATALTALAICPLAVALARHLADDQ 396 G AT ATA TALAI PLA+AL HL D Sbjct: 371 GVQAATYATAFTALAIFPLALALRPHLGDHS 401 >ref|YP_004349343.1| major facilitator transporter [Burkholderia gladioli BSR3] gb|AEA63831.1| major facilitator transporter [Burkholderia gladioli BSR3] Length = 404 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 246/385 (63%), Positives = 296/385 (76%), Gaps = 4/385 (1%) Query: 12 PDRA---RSTRTLTVTGLNHALHDGYTDVIYVLLPVWQAEFALSYGLLALLRGLYAGAMA 68 P++A R L ++ HALHDGYTD+IY LLPVWQA+F L+YG LA+LRG+YAG MA Sbjct: 17 PEQAGPVSRKRVLWLSCTAHALHDGYTDMIYALLPVWQADFGLNYGALAILRGIYAGTMA 76 Query: 69 GLQIPVGRIAERIDGKIILIAGTALSALGYAFAGFSGGVIGLGLALALSGAGSSTQHPIA 128 LQ+P GRIA + + L+ GT L+ALGYAFAG SG ++GL +ALA+SG+GSSTQHP+A Sbjct: 77 TLQLPAGRIAAMLGTRATLVLGTLLAALGYAFAGMSGSLLGLCVALAISGSGSSTQHPLA 136 Query: 129 SAAVSRAYGTAARGPLGVYNFSGDLGKAAIPALTSILLVIMSWRHTLLVLAFAGLLVAVC 188 S AVSR YG ARGPL +YNFSGDLGK+A+PA S+L+ M WRH L ++ G++VA+ Sbjct: 137 SGAVSRVYGRQARGPLSIYNFSGDLGKSALPAAISLLITFMPWRHALWAMSALGMVVALV 196 Query: 189 IALWMPSVGKGAEHKATSASRGAS-TGGGFRWLLAIGILDTAVRMGFLTFLPFLLRDKGA 247 IALW+P+V + A ++SR A +G GF L IG+LDTAVRMG LTFLPFL++ KG Sbjct: 197 IALWLPNVPRDAAPADEASSRHAEGSGSGFSLLFTIGMLDTAVRMGLLTFLPFLMKAKGI 256 Query: 248 SLPTNGLALALVFIGGAAGKFTCGWLGERVGTLRTVLITEGGTAALIAAVLALPLAPAIV 307 S P G ALALVFIGGAAGKF CGWLGER+G + TVL TEGGTA LI AV+ LPLAPA++ Sbjct: 257 STPMMGTALALVFIGGAAGKFVCGWLGERMGVIGTVLSTEGGTALLILAVIYLPLAPAMI 316 Query: 308 LLPLLGVMLNGTSSVLYGTVPELTPAHQTERAFALFYTGTIGSGAIAPVLYGLLGDALGP 367 LLPLLG MLNGTSSVLYGTVPELT +TERAFA+FYTG I +GA+APV YGLLGD +G Sbjct: 317 LLPLLGAMLNGTSSVLYGTVPELTTVERTERAFAIFYTGIIAAGALAPVGYGLLGDRIGV 376 Query: 368 TLATAATALTALAICPLAVALARHL 392 AT ATA TALAI PLA+AL HL Sbjct: 377 VGATIATAATALAIFPLALALRPHL 401