BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0041.0006.p         (110 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767122.1| 30S ribosomal protein S16 [Bradyrhizobium japon...   204   3e-51
ref|YP_001202572.1| 30S ribosomal protein S16 [Bradyrhizobium sp...   203   9e-51
ref|YP_319385.1| 30S ribosomal protein S16 [Nitrobacter winograd...   200   7e-50
ref|YP_001236560.1| 30S ribosomal protein S16 [Bradyrhizobium sp...   199   1e-49
ref|YP_578768.1| 30S ribosomal protein S16 [Nitrobacter hamburge...   199   1e-49

>ref|NP_767122.1| 30S ribosomal protein S16 [Bradyrhizobium japonicum USDA 110]
 sp|Q89X40.1|RS16_BRAJA RecName: Full=30S ribosomal protein S16
 dbj|BAC45747.1| 30S ribosomal protein S16 [Bradyrhizobium japonicum USDA 110]
          Length = 110

 Score =  204 bits (520), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 101/110 (91%), Positives = 107/110 (97%)

Query: 1   MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGHFNPLLPKDNESRLKLDMDKVK 60
           MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLG+FNPLLPKDNE+RLKLDM+KVK
Sbjct: 1   MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGYFNPLLPKDNEARLKLDMEKVK 60

Query: 61  AWLAKGAQPSDRVTRFLDAAGVKKRAPRNNPEKAVPRKERKAQAEAAAKA 110
           AW+AKGAQPSDRV+RFLDAAGVKKR  RNNP+KAVPRKERKAQAEAAAK 
Sbjct: 61  AWVAKGAQPSDRVSRFLDAAGVKKREARNNPQKAVPRKERKAQAEAAAKG 110


>ref|YP_001202572.1| 30S ribosomal protein S16 [Bradyrhizobium sp. ORS 278]
 sp|A4YKA0.1|RS16_BRASO RecName: Full=30S ribosomal protein S16
 emb|CAL74326.1| 30S ribosomal protein S16 [Bradyrhizobium sp. ORS 278]
          Length = 110

 Score =  203 bits (516), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 100/110 (90%), Positives = 104/110 (94%)

Query: 1   MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGHFNPLLPKDNESRLKLDMDKVK 60
           MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLG+FNPL+PKDNE+RLKLDM+KVK
Sbjct: 1   MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGYFNPLMPKDNEARLKLDMEKVK 60

Query: 61  AWLAKGAQPSDRVTRFLDAAGVKKRAPRNNPEKAVPRKERKAQAEAAAKA 110
            WLAKGAQPSDRV RFLD AGVKKR  RNNPEKAVPRKERKAQAEAAAK 
Sbjct: 61  GWLAKGAQPSDRVARFLDTAGVKKREARNNPEKAVPRKERKAQAEAAAKG 110


>ref|YP_319385.1| 30S ribosomal protein S16 [Nitrobacter winogradskyi Nb-255]
 sp|Q3SNV8.1|RS16_NITWN RecName: Full=30S ribosomal protein S16
 gb|ABA06033.1| SSU ribosomal protein S16P [Nitrobacter winogradskyi Nb-255]
          Length = 110

 Score =  200 bits (508), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 99/110 (90%), Positives = 103/110 (93%)

Query: 1   MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGHFNPLLPKDNESRLKLDMDKVK 60
           M VVIRLARAGTKKRPVYHVV ADSR+PRDGRFIERLGHFNPL+PKDN  RLKLD+DKVK
Sbjct: 1   MPVVIRLARAGTKKRPVYHVVAADSRYPRDGRFIERLGHFNPLMPKDNADRLKLDLDKVK 60

Query: 61  AWLAKGAQPSDRVTRFLDAAGVKKRAPRNNPEKAVPRKERKAQAEAAAKA 110
           AWLAKGAQPSDRV RFLDAAGVKKR PRNNP KAVPRKERKAQAEAAAK+
Sbjct: 61  AWLAKGAQPSDRVARFLDAAGVKKRTPRNNPVKAVPRKERKAQAEAAAKS 110


>ref|YP_001236560.1| 30S ribosomal protein S16 [Bradyrhizobium sp. BTAi1]
 sp|A5E910.1|RS16_BRASB RecName: Full=30S ribosomal protein S16
 gb|ABQ32654.1| SSU ribosomal protein S16P [Bradyrhizobium sp. BTAi1]
          Length = 110

 Score =  199 bits (505), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 99/110 (90%), Positives = 103/110 (93%)

Query: 1   MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGHFNPLLPKDNESRLKLDMDKVK 60
           MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLG+FNPL+PKDNE+RLKLDM+KVK
Sbjct: 1   MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGYFNPLMPKDNEARLKLDMEKVK 60

Query: 61  AWLAKGAQPSDRVTRFLDAAGVKKRAPRNNPEKAVPRKERKAQAEAAAKA 110
            WLAKGAQPSDRV RFLDAAGVKKR  R NP KAVPRKERKAQAEAAAK 
Sbjct: 61  GWLAKGAQPSDRVARFLDAAGVKKREARQNPIKAVPRKERKAQAEAAAKG 110


>ref|YP_578768.1| 30S ribosomal protein S16 [Nitrobacter hamburgensis X14]
 sp|Q1QHI9.1|RS16_NITHX RecName: Full=30S ribosomal protein S16
 gb|ABE64308.1| SSU ribosomal protein S16P [Nitrobacter hamburgensis X14]
          Length = 110

 Score =  199 bits (505), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 98/110 (89%), Positives = 104/110 (94%)

Query: 1   MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGHFNPLLPKDNESRLKLDMDKVK 60
           M VVIRLARAGTKKRPVYHVVVADSR+PRDGRFIERLG+FNPL+PKDN  RLK+D+DKVK
Sbjct: 1   MPVVIRLARAGTKKRPVYHVVVADSRYPRDGRFIERLGYFNPLMPKDNADRLKIDLDKVK 60

Query: 61  AWLAKGAQPSDRVTRFLDAAGVKKRAPRNNPEKAVPRKERKAQAEAAAKA 110
           AWLAKGAQPSDRV RFLDAAGVKKR  RNNPEKAVPRKERKAQAEAAAK+
Sbjct: 61  AWLAKGAQPSDRVARFLDAAGVKKRTARNNPEKAVPRKERKAQAEAAAKS 110