BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0040.0023.p         (105 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_768118.1| hypothetical protein blr1478 [Bradyrhizobium ja...   150   5e-35
ref|YP_533859.1| hypothetical protein RPC_4014 [Rhodopseudomonas...   150   8e-35
ref|YP_001242774.1| hypothetical protein BBta_6981 [Bradyrhizobi...   145   2e-33
ref|YP_001203216.1| hypothetical protein BRADO1066 [Bradyrhizobi...   145   3e-33
ref|YP_568519.1| hypothetical protein RPD_1380 [Rhodopseudomonas...   140   9e-32

>ref|NP_768118.1| hypothetical protein blr1478 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46743.1| blr1478 [Bradyrhizobium japonicum USDA 110]
          Length = 102

 Score =  150 bits (380), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/103 (71%), Positives = 87/103 (84%), Gaps = 1/103 (0%)

Query: 1   MTSPLEQKKIRITGPSVVTANRTWDGAVVYRTAKQGWSTELSDSAVVSTSDAARALLAEA 60
           MTSPL+QK ++ITGPSVVTANRTWDG VVYRTA +GWS EL+D+A+V  SD A+ALLAEA
Sbjct: 1   MTSPLQQK-LKITGPSVVTANRTWDGVVVYRTAARGWSVELTDAAIVRNSDEAKALLAEA 59

Query: 61  TADDVGAVGPYIAPVELKDGGKLKPGNLREHIRAKGVTIDLQV 103
            ADDVGA+GPYIAPV++ + GK+ PGNLRE IR  GVTI L V
Sbjct: 60  VADDVGAIGPYIAPVQVDEAGKILPGNLREQIRRDGVTIGLPV 102


>ref|YP_533859.1| hypothetical protein RPC_4014 [Rhodopseudomonas palustris BisB18]
 gb|ABD89540.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
          Length = 104

 Score =  150 bits (378), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 73/101 (72%), Positives = 88/101 (87%), Gaps = 1/101 (0%)

Query: 1   MTSPLEQKKIRITGPSVVTANRTWDGAVVYRTAKQGWSTELSDSAVVSTSDAARALLAEA 60
           MTSPL+QK I+ITGPSVVTANRT+DGAV++RTA + WST+L+D+AVVST D ARALLAE+
Sbjct: 1   MTSPLQQK-IKITGPSVVTANRTFDGAVIWRTATKDWSTDLADAAVVSTVDTARALLAES 59

Query: 61  TADDVGAVGPYIAPVELKDGGKLKPGNLREHIRAKGVTIDL 101
            ADD+GAVGPYIAPV + D G + PGNLRE IR+ GVTID+
Sbjct: 60  AADDIGAVGPYIAPVTIDDSGAIAPGNLREQIRSTGVTIDI 100


>ref|YP_001242774.1| hypothetical protein BBta_6981 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38868.1| hypothetical protein BBta_6981 [Bradyrhizobium sp. BTAi1]
          Length = 104

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 84/101 (83%), Gaps = 1/101 (0%)

Query: 1   MTSPLEQKKIRITGPSVVTANRTWDGAVVYRTAKQGWSTELSDSAVVSTSDAARALLAEA 60
           MTSPL+QK I+ITGPS++TANRTWDGAV+YRT  + WS EL+D+A+V T+D ARALL+EA
Sbjct: 1   MTSPLQQK-IKITGPSIITANRTWDGAVIYRTGTKSWSDELTDAAIVRTADEARALLSEA 59

Query: 61  TADDVGAVGPYIAPVELKDGGKLKPGNLREHIRAKGVTIDL 101
            ADD+ A+GPYIAPVE+   G +KPGN+REHIR  G TI L
Sbjct: 60  VADDLNAIGPYIAPVEVATDGAVKPGNMREHIRLTGTTIAL 100


>ref|YP_001203216.1| hypothetical protein BRADO1066 [Bradyrhizobium sp. ORS 278]
 emb|CAL74979.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 104

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 83/101 (82%), Gaps = 1/101 (0%)

Query: 1   MTSPLEQKKIRITGPSVVTANRTWDGAVVYRTAKQGWSTELSDSAVVSTSDAARALLAEA 60
           MTSPL+QK I+ITGPS+VTANRTWDGAV+YRT  + WS EL+D+A+V T+D ARALL EA
Sbjct: 1   MTSPLQQK-IKITGPSIVTANRTWDGAVIYRTGSKSWSDELTDAAIVRTADEARALLTEA 59

Query: 61  TADDVGAVGPYIAPVELKDGGKLKPGNLREHIRAKGVTIDL 101
            ADD+ A+GPYIAPVE+   G +KPGN+REHIR  G TI L
Sbjct: 60  VADDLNAIGPYIAPVEVAADGAVKPGNMREHIRLTGATIAL 100


>ref|YP_568519.1| hypothetical protein RPD_1380 [Rhodopseudomonas palustris BisB5]
 gb|ABE38618.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 104

 Score =  140 bits (352), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 83/101 (82%), Gaps = 1/101 (0%)

Query: 1   MTSPLEQKKIRITGPSVVTANRTWDGAVVYRTAKQGWSTELSDSAVVSTSDAARALLAEA 60
           MTSPL+QK I+ITGPSVVTANRT+DG V+YRT  QGWST+L+++A+V  +  ARALLAE+
Sbjct: 1   MTSPLQQK-IKITGPSVVTANRTFDGVVIYRTGAQGWSTDLTEAAIVREAATARALLAES 59

Query: 61  TADDVGAVGPYIAPVELKDGGKLKPGNLREHIRAKGVTIDL 101
            ADDVGAVG YIAPV++ D G + PGNLRE IR  GVTI L
Sbjct: 60  VADDVGAVGAYIAPVKIDDAGVVIPGNLREQIRKSGVTIAL 100