BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0040.0022.p (576 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768119.1| ferredoxin-nitrite reductase [Bradyrhizobium ja... 905 0.0 ref|YP_001242773.1| sulfite/ferredoxin-nitrite reductase [Bradyr... 894 0.0 ref|YP_001203217.1| sulfite/ferredoxin-nitrite reductase [Bradyr... 891 0.0 ref|YP_568520.1| nitrite/sulfite reductase, hemoprotein beta-com... 875 0.0 ref|YP_533858.1| nitrite and sulfite reductase 4Fe-4S region [Rh... 862 0.0 >ref|NP_768119.1| ferredoxin-nitrite reductase [Bradyrhizobium japonicum USDA 110] dbj|BAC46744.1| ferredoxin-nitrite reductase [Bradyrhizobium japonicum USDA 110] Length = 551 Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/503 (85%), Positives = 468/503 (93%), Gaps = 2/503 (0%) Query: 1 MYAYDELDRTLINERVSEFRDQVKRRLSGELTEDEFKILRLQNGVYLQLHAYMFRVAIPY 60 MYAYDE+DRTL+NERVSEFRDQV+RRLSGELTEDEFK+LRLQNGVYLQLHAYMFRVAIPY Sbjct: 1 MYAYDEIDRTLVNERVSEFRDQVQRRLSGELTEDEFKMLRLQNGVYLQLHAYMFRVAIPY 60 Query: 61 GTLSSKQLRRLAHVARRYDRGYGHFTTRQNIQFNWIKLAELPDALADLAEVGIHAMQTSG 120 GTL+S QLR LAHVAR+YDRGYGHFTTRQNIQFNWIKL++LPDALADLAEVGIHAMQTSG Sbjct: 61 GTLASNQLRALAHVARKYDRGYGHFTTRQNIQFNWIKLSDLPDALADLAEVGIHAMQTSG 120 Query: 121 NNMRNVTSDQWAGVAPGEIEDPRIWSEILRQHTTLHPEFSFLPRKFKIAITASEHDRAAI 180 NNMRNVTSDQWAGVAPGEIEDPRIWSE++RQHTTLHPEFSFLPRKFKIAITAS+HDRAAI Sbjct: 121 NNMRNVTSDQWAGVAPGEIEDPRIWSELIRQHTTLHPEFSFLPRKFKIAITASDHDRAAI 180 Query: 181 KIHDIGLRLHKNADGETGFEVLVGGGLGRTPFIAKTIKSFVHGRDILSYVEAILRVYNQY 240 K+HDIGLRL KN GETGFEVLVGGGLGRTPFI KTIK FVHGRD+LSY+EAILRVYNQY Sbjct: 181 KVHDIGLRLIKNEKGETGFEVLVGGGLGRTPFIGKTIKHFVHGRDLLSYIEAILRVYNQY 240 Query: 241 GRRDNIYKARIKILVHELGIEKFAKEVEEEWKAMGDVGLTLDHAAIEEVRSRFSYPPYEK 300 GRRDNIYKARIKILVHELGIEKF++EVEEEW+ + + L +D IE++RSRF YP YEK Sbjct: 241 GRRDNIYKARIKILVHELGIEKFSREVEEEWQHIRNSSLQIDDEVIEDIRSRFIYPAYEK 300 Query: 301 LPHMPDELKQAAHDPLFERWRKNSVAPHKVQGYSIVTLSLKPVGGPPGDATAEQMDAVAD 360 LPHMPDEL+QAA DP FE WRKNSVAPHK GYSIVT+SLKP+G PPGDATAEQMDA+AD Sbjct: 301 LPHMPDELRQAAADPEFEAWRKNSVAPHKNPGYSIVTISLKPIGAPPGDATAEQMDALAD 360 Query: 361 LADKYSFGEIRVGHEQNLALPHVAKRDLPQLFKALDRLGLATPNVNLVTDIIACPGLDYC 420 LAD+YSFGEIRVGHEQNLALPHVAKRDLP L+KALD+LGLATPNVNL+TDIIACPGLDYC Sbjct: 361 LADRYSFGEIRVGHEQNLALPHVAKRDLPALWKALDKLGLATPNVNLITDIIACPGLDYC 420 Query: 421 SLANARSIPIAQELTRRFANHDTADLIGRLHINISGCINACGHHHVGHIGILGVEKNGEE 480 SLANARSIPIAQELTRRFANH+ A+LIGRLHINISGCINACGHHHVGHIGILGVEKNGEE Sbjct: 421 SLANARSIPIAQELTRRFANHELANLIGRLHINISGCINACGHHHVGHIGILGVEKNGEE 480 Query: 481 FYQITVPRRRER--AVGHADRPG 501 YQIT+ R + A+G+ PG Sbjct: 481 VYQITIGGRADEGAALGNLIGPG 503 >ref|YP_001242773.1| sulfite/ferredoxin-nitrite reductase [Bradyrhizobium sp. BTAi1] gb|ABQ38867.1| Sulfite/ferredoxin-nitrite reductase [Bradyrhizobium sp. BTAi1] Length = 551 Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/489 (86%), Positives = 456/489 (93%) Query: 1 MYAYDELDRTLINERVSEFRDQVKRRLSGELTEDEFKILRLQNGVYLQLHAYMFRVAIPY 60 MYAYD++DRTL+NERV+EFRDQVKRRLSGELTEDEFKILRLQNGVYLQLHAYM+R+AIPY Sbjct: 1 MYAYDDIDRTLVNERVAEFRDQVKRRLSGELTEDEFKILRLQNGVYLQLHAYMYRIAIPY 60 Query: 61 GTLSSKQLRRLAHVARRYDRGYGHFTTRQNIQFNWIKLAELPDALADLAEVGIHAMQTSG 120 GTLSS+QLRRLAHVARRYDRGYGHFTTRQNIQFNWIKLAELPDA+ADLAEVGI +MQTSG Sbjct: 61 GTLSSEQLRRLAHVARRYDRGYGHFTTRQNIQFNWIKLAELPDAMADLAEVGIQSMQTSG 120 Query: 121 NNMRNVTSDQWAGVAPGEIEDPRIWSEILRQHTTLHPEFSFLPRKFKIAITASEHDRAAI 180 NNMRNVTSDQWAGVAPGE+EDPRIW+E+LRQ TTLHPEFSFLPRKFKIAITAS HDRAAI Sbjct: 121 NNMRNVTSDQWAGVAPGEVEDPRIWAELLRQFTTLHPEFSFLPRKFKIAITASAHDRAAI 180 Query: 181 KIHDIGLRLHKNADGETGFEVLVGGGLGRTPFIAKTIKSFVHGRDILSYVEAILRVYNQY 240 KIHDIGLRL KN GETGFEVLVGGGLGR+PFIAKTIK FVHG DILSYVEAILRVYNQY Sbjct: 181 KIHDIGLRLLKNEQGETGFEVLVGGGLGRSPFIAKTIKPFVHGHDILSYVEAILRVYNQY 240 Query: 241 GRRDNIYKARIKILVHELGIEKFAKEVEEEWKAMGDVGLTLDHAAIEEVRSRFSYPPYEK 300 GRRDNIYKARIKILVHELGIE FA EVEEEW+ + D L LD +E++RSRF YP YE Sbjct: 241 GRRDNIYKARIKILVHELGIETFAAEVEEEWQQIRDGVLKLDDGIVEDIRSRFFYPAYET 300 Query: 301 LPHMPDELKQAAHDPLFERWRKNSVAPHKVQGYSIVTLSLKPVGGPPGDATAEQMDAVAD 360 LPHMPDEL+QAAHDP FE WRKNSV HKVQGY+IVT+SLKP+G PPGDATA+QMDA+AD Sbjct: 301 LPHMPDELRQAAHDPKFEAWRKNSVVAHKVQGYAIVTVSLKPIGKPPGDATADQMDALAD 360 Query: 361 LADKYSFGEIRVGHEQNLALPHVAKRDLPQLFKALDRLGLATPNVNLVTDIIACPGLDYC 420 +ADKYSFGEIRVGHEQNLALPHV KRDLP ++KALD +GLA PNVNLV+DIIACPGLDYC Sbjct: 361 IADKYSFGEIRVGHEQNLALPHVRKRDLPAVWKALDAIGLAIPNVNLVSDIIACPGLDYC 420 Query: 421 SLANARSIPIAQELTRRFANHDTADLIGRLHINISGCINACGHHHVGHIGILGVEKNGEE 480 SLANARSIPIAQE+TRRFANHDTA+LIGRLHINISGCINACGHHHVGHIGILGVEKN EE Sbjct: 421 SLANARSIPIAQEITRRFANHDTANLIGRLHINISGCINACGHHHVGHIGILGVEKNNEE 480 Query: 481 FYQITVPRR 489 FYQIT+ R Sbjct: 481 FYQITIGGR 489 >ref|YP_001203217.1| sulfite/ferredoxin-nitrite reductase [Bradyrhizobium sp. ORS 278] emb|CAL74980.1| Sulfite/ferredoxin-nitrite reductase [Bradyrhizobium sp. ORS 278] Length = 551 Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/489 (86%), Positives = 454/489 (92%) Query: 1 MYAYDELDRTLINERVSEFRDQVKRRLSGELTEDEFKILRLQNGVYLQLHAYMFRVAIPY 60 MYAYD++DRTL+NERV+EFRDQVKRRLSGELTEDEFK+LRLQNGVYLQLHAYM+R+AIPY Sbjct: 1 MYAYDDIDRTLVNERVAEFRDQVKRRLSGELTEDEFKMLRLQNGVYLQLHAYMYRIAIPY 60 Query: 61 GTLSSKQLRRLAHVARRYDRGYGHFTTRQNIQFNWIKLAELPDALADLAEVGIHAMQTSG 120 GTLSS QLRRLAHVARRYDRGYGHFTTRQNIQFNWIKLAELPDA+ADLAEVGI +MQTSG Sbjct: 61 GTLSSDQLRRLAHVARRYDRGYGHFTTRQNIQFNWIKLAELPDAMADLAEVGIQSMQTSG 120 Query: 121 NNMRNVTSDQWAGVAPGEIEDPRIWSEILRQHTTLHPEFSFLPRKFKIAITASEHDRAAI 180 NNMRNVTSDQWAGVAPGE+EDPRIW+E+LRQ TTLHPEFSFLPRKFKIAITASEHDRAAI Sbjct: 121 NNMRNVTSDQWAGVAPGEVEDPRIWAELLRQFTTLHPEFSFLPRKFKIAITASEHDRAAI 180 Query: 181 KIHDIGLRLHKNADGETGFEVLVGGGLGRTPFIAKTIKSFVHGRDILSYVEAILRVYNQY 240 KIHDIGLRL KN GETGFEVLVGGGLGR+PFIAKTIK FVHG DILSYVEAILRVYNQY Sbjct: 181 KIHDIGLRLKKNEQGETGFEVLVGGGLGRSPFIAKTIKPFVHGHDILSYVEAILRVYNQY 240 Query: 241 GRRDNIYKARIKILVHELGIEKFAKEVEEEWKAMGDVGLTLDHAAIEEVRSRFSYPPYEK 300 GRRDNIYKARIKILVHELGIEKFA EVEEEW+ + D L LD +E++RSRF YP YE Sbjct: 241 GRRDNIYKARIKILVHELGIEKFAAEVEEEWQQIRDGVLKLDQGIVEDIRSRFFYPAYET 300 Query: 301 LPHMPDELKQAAHDPLFERWRKNSVAPHKVQGYSIVTLSLKPVGGPPGDATAEQMDAVAD 360 LPHMPDELKQAAHD FE WRKNSV PHK QGY+I +SLKPVG PPGDATA+QMDA+AD Sbjct: 301 LPHMPDELKQAAHDAKFEAWRKNSVFPHKQQGYAIAVVSLKPVGKPPGDATADQMDALAD 360 Query: 361 LADKYSFGEIRVGHEQNLALPHVAKRDLPQLFKALDRLGLATPNVNLVTDIIACPGLDYC 420 +AD+YSFGEIRVGHEQNLALPHV KRDLP ++KAL+ +GLA PNVNLV+DIIACPGLDYC Sbjct: 361 IADRYSFGEIRVGHEQNLALPHVRKRDLPAVWKALEAIGLAIPNVNLVSDIIACPGLDYC 420 Query: 421 SLANARSIPIAQELTRRFANHDTADLIGRLHINISGCINACGHHHVGHIGILGVEKNGEE 480 SLANARSIPIAQE+TRRFANHDTA+LIGRLHINISGCINACGHHHVGHIGILGVEKN EE Sbjct: 421 SLANARSIPIAQEITRRFANHDTANLIGRLHINISGCINACGHHHVGHIGILGVEKNNEE 480 Query: 481 FYQITVPRR 489 FYQIT+ R Sbjct: 481 FYQITIGGR 489 >ref|YP_568520.1| nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like [Rhodopseudomonas palustris BisB5] gb|ABE38619.1| nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like [Rhodopseudomonas palustris BisB5] Length = 551 Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/489 (84%), Positives = 453/489 (92%) Query: 1 MYAYDELDRTLINERVSEFRDQVKRRLSGELTEDEFKILRLQNGVYLQLHAYMFRVAIPY 60 MYAYD++DRTL+NERV+EFRDQV+RRLSGELTEDEFK+LRL NGVYLQLHAYMFRVAIPY Sbjct: 1 MYAYDDIDRTLVNERVAEFRDQVQRRLSGELTEDEFKVLRLMNGVYLQLHAYMFRVAIPY 60 Query: 61 GTLSSKQLRRLAHVARRYDRGYGHFTTRQNIQFNWIKLAELPDALADLAEVGIHAMQTSG 120 GTLSS QLR+LAHVAR+YDRGYGHFTTRQNIQFNWI LA+LPDALADLAEVGIHAMQTSG Sbjct: 61 GTLSSPQLRKLAHVARKYDRGYGHFTTRQNIQFNWIALADLPDALADLAEVGIHAMQTSG 120 Query: 121 NNMRNVTSDQWAGVAPGEIEDPRIWSEILRQHTTLHPEFSFLPRKFKIAITASEHDRAAI 180 N RNVT+DQW GVAP E+EDPR+W+EILRQHT+LHPEFSFLPRKFK AITA++HDRAAI Sbjct: 121 NCTRNVTADQWGGVAPDEVEDPRVWAEILRQHTSLHPEFSFLPRKFKFAITAADHDRAAI 180 Query: 181 KIHDIGLRLHKNADGETGFEVLVGGGLGRTPFIAKTIKSFVHGRDILSYVEAILRVYNQY 240 K+HDIGLRL KN GETGFEVLVGGGLGR+PFI KTIKSFV GRDILSYVEAILRVYNQY Sbjct: 181 KVHDIGLRLRKNDSGETGFEVLVGGGLGRSPFIGKTIKSFVPGRDILSYVEAILRVYNQY 240 Query: 241 GRRDNIYKARIKILVHELGIEKFAKEVEEEWKAMGDVGLTLDHAAIEEVRSRFSYPPYEK 300 GRRDNIYKARIKILVHELGIEKFA EVE+ W+ + + LTLD I ++RSRF YP YEK Sbjct: 241 GRRDNIYKARIKILVHELGIEKFAAEVEQAWRPIAEGPLTLDDEMIADIRSRFIYPAYEK 300 Query: 301 LPHMPDELKQAAHDPLFERWRKNSVAPHKVQGYSIVTLSLKPVGGPPGDATAEQMDAVAD 360 LP MPDEL++AAHD FE WRKNSVAPH+ GY+IVTLSLKPVGGPPGDATA+QMDA+AD Sbjct: 301 LPAMPDELRKAAHDARFEAWRKNSVAPHREPGYAIVTLSLKPVGGPPGDATADQMDAIAD 360 Query: 361 LADKYSFGEIRVGHEQNLALPHVAKRDLPQLFKALDRLGLATPNVNLVTDIIACPGLDYC 420 LADKYSFGEIRVGHEQNLALPHVAKRDLP L+ ALD +G+ATPNVNLV+DIIACPGLDYC Sbjct: 361 LADKYSFGEIRVGHEQNLALPHVAKRDLPALWTALDAIGVATPNVNLVSDIIACPGLDYC 420 Query: 421 SLANARSIPIAQELTRRFANHDTADLIGRLHINISGCINACGHHHVGHIGILGVEKNGEE 480 SLANARSIPIAQELTRRFANH+TA+LIGRLH+NISGCINACGHHHVGHIGILGVEKNGEE Sbjct: 421 SLANARSIPIAQELTRRFANHETANLIGRLHVNISGCINACGHHHVGHIGILGVEKNGEE 480 Query: 481 FYQITVPRR 489 FYQIT+ R Sbjct: 481 FYQITIGGR 489 >ref|YP_533858.1| nitrite and sulfite reductase 4Fe-4S region [Rhodopseudomonas palustris BisB18] gb|ABD89539.1| nitrite and sulphite reductase 4Fe-4S region [Rhodopseudomonas palustris BisB18] Length = 550 Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/489 (84%), Positives = 452/489 (92%), Gaps = 1/489 (0%) Query: 1 MYAYDELDRTLINERVSEFRDQVKRRLSGELTEDEFKILRLQNGVYLQLHAYMFRVAIPY 60 MYAYDE+DRTLINERV+EFRDQV+RRL+GE+TEDEFK+LRL NGVYLQLHAYMFRVAIPY Sbjct: 1 MYAYDEIDRTLINERVAEFRDQVQRRLAGEITEDEFKMLRLMNGVYLQLHAYMFRVAIPY 60 Query: 61 GTLSSKQLRRLAHVARRYDRGYGHFTTRQNIQFNWIKLAELPDALADLAEVGIHAMQTSG 120 GTLS+ QLR+LAHVAR+YDRGYGHFTTRQNIQFNWI LA+LPDALADLAEVGIHAMQTSG Sbjct: 61 GTLSADQLRKLAHVARKYDRGYGHFTTRQNIQFNWIALADLPDALADLAEVGIHAMQTSG 120 Query: 121 NNMRNVTSDQWAGVAPGEIEDPRIWSEILRQHTTLHPEFSFLPRKFKIAITASEHDRAAI 180 N RN+T+DQWAGVAPGEIEDPRIW+EI+RQ+TTLHPEFSFLPRKFK AITAS+HDRAAI Sbjct: 121 NCTRNITADQWAGVAPGEIEDPRIWAEIMRQYTTLHPEFSFLPRKFKFAITASDHDRAAI 180 Query: 181 KIHDIGLRLHKNADGETGFEVLVGGGLGRTPFIAKTIKSFVHGRDILSYVEAILRVYNQY 240 KIHDIGLRL KN GETGFEVLVGGGLGRTPFI KTIKSFV GRDILSYVEAILRVYNQY Sbjct: 181 KIHDIGLRLRKNDQGETGFEVLVGGGLGRTPFIGKTIKSFVPGRDILSYVEAILRVYNQY 240 Query: 241 GRRDNIYKARIKILVHELGIEKFAKEVEEEWKAMGDVGLTLDHAAIEEVRSRFSYPPYEK 300 GRRDNIYKARIKILVHELG+EKF +EV+EE++ +GD LTLD A IEE+RSRF+YP YEK Sbjct: 241 GRRDNIYKARIKILVHELGLEKFREEVDEEFRQIGDGPLTLDDAMIEEIRSRFTYPDYEK 300 Query: 301 LPHMPDELKQAAHDPLFERWRKNSVAPHKVQGYSIVTLSLKPVGGPPGDATAEQMDAVAD 360 L P+EL +A+ DP F W NSVAPHK QGY+IVTLSLKPVG PPGDATA QMDA+AD Sbjct: 301 LSDNPEELTKASADPGFAAWLNNSVAPHKQQGYAIVTLSLKPVGAPPGDATAVQMDAIAD 360 Query: 361 LADKYSFGEIRVGHEQNLALPHVAKRDLPQLFKALDRLGLATPNVNLVTDIIACPGLDYC 420 LAD+YSFGEIRVGHEQNLALPHVAKRDLP L++ALD++G+ATPNVNL+TDIIACPGLDYC Sbjct: 361 LADRYSFGEIRVGHEQNLALPHVAKRDLPALWRALDKIGVATPNVNLITDIIACPGLDYC 420 Query: 421 SLANARSIPIAQELTRRFANHDTADLIGRLHINISGCINACGHHHVGHIGILGVEKNGEE 480 SLAN RSIPIAQELTRRF+N +TA+LIGRLHINISGCINACGHHHVGHIGILGVEKN EE Sbjct: 421 SLANTRSIPIAQELTRRFSN-ETANLIGRLHINISGCINACGHHHVGHIGILGVEKNDEE 479 Query: 481 FYQITVPRR 489 FYQIT+ R Sbjct: 480 FYQITIGGR 488