BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0040.0021.p         (141 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_768120.1| hypothetical protein blr1480 [Bradyrhizobium ja...   229   9e-59
ref|YP_001242772.1| hypothetical protein BBta_6979 [Bradyrhizobi...   228   2e-58
ref|YP_001203218.1| hypothetical protein BRADO1068 [Bradyrhizobi...   223   8e-57
ref|ZP_08628440.1| oxidoreductase [Bradyrhizobiaceae bacterium S...   204   2e-51
ref|YP_533857.1| hypothetical protein RPC_4012 [Rhodopseudomonas...   196   1e-48

>ref|NP_768120.1| hypothetical protein blr1480 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46745.1| blr1480 [Bradyrhizobium japonicum USDA 110]
          Length = 171

 Score =  229 bits (585), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 108/140 (77%), Positives = 126/140 (90%)

Query: 1   VSAERFLADPEALLRRPGKLGVIWPNNRNLDDLVPHLDRLASVALVFPTFRDGRAYSQAR 60
           V AERF+ + +ALL+R GK+GVIWPNNR++D+LVP+L ++A+VALVFP+FRDGRAYSQAR
Sbjct: 31  VPAERFVGEADALLKRAGKVGVIWPNNRDIDELVPYLGKVAAVALVFPSFRDGRAYSQAR 90

Query: 61  LLRERYGYDGELRATGQILRDQFVFMTRAGFDAFEVKKDADADAFAATMKRYSVFYQPTG 120
           LLRERY Y GELRATGQ+LRDQFVFM RAGFD+FEVKK ADA+AF  T KRYSVFYQPTG
Sbjct: 91  LLRERYNYRGELRATGQVLRDQFVFMLRAGFDSFEVKKQADAEAFMQTAKRYSVFYQPTG 150

Query: 121 DGRVTALNRRMQLRHSESAG 140
           DGR+TAL+RRMQLRHSE  G
Sbjct: 151 DGRITALHRRMQLRHSEGVG 170


>ref|YP_001242772.1| hypothetical protein BBta_6979 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38866.1| hypothetical protein BBta_6979 [Bradyrhizobium sp. BTAi1]
          Length = 172

 Score =  228 bits (581), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 110/141 (78%), Positives = 129/141 (91%), Gaps = 1/141 (0%)

Query: 1   VSAERFLADPEALLRRPG-KLGVIWPNNRNLDDLVPHLDRLASVALVFPTFRDGRAYSQA 59
           VS  RFLA P+AL+ R G KLGVIWPNNR++DDLVP+LDRLA +ALVFP+FRDGRAY+QA
Sbjct: 31  VSETRFLAGPDALVSRTGGKLGVIWPNNRDVDDLVPYLDRLALIALVFPSFRDGRAYTQA 90

Query: 60  RLLRERYGYDGELRATGQILRDQFVFMTRAGFDAFEVKKDADADAFAATMKRYSVFYQPT 119
           RLLRERYG+ GELRATGQ+LRDQFVFM RAGFDAF+VKK ADA+AF+ T+KRYSVFYQP 
Sbjct: 91  RLLRERYGFRGELRATGQVLRDQFVFMLRAGFDAFDVKKQADAEAFSETVKRYSVFYQPA 150

Query: 120 GDGRVTALNRRMQLRHSESAG 140
           GDGR++AL++R+QLRHSESAG
Sbjct: 151 GDGRISALHQRLQLRHSESAG 171


>ref|YP_001203218.1| hypothetical protein BRADO1068 [Bradyrhizobium sp. ORS 278]
 emb|CAL74981.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 172

 Score =  223 bits (568), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 109/141 (77%), Positives = 126/141 (89%), Gaps = 1/141 (0%)

Query: 1   VSAERFLADPEALL-RRPGKLGVIWPNNRNLDDLVPHLDRLASVALVFPTFRDGRAYSQA 59
           VS  RFLA P+AL+ R  GKLGVIWPNNR++DDLVP+LDRLA VALVFP+FRDGRAY+QA
Sbjct: 31  VSETRFLAGPDALVGRTGGKLGVIWPNNRDIDDLVPYLDRLALVALVFPSFRDGRAYTQA 90

Query: 60  RLLRERYGYDGELRATGQILRDQFVFMTRAGFDAFEVKKDADADAFAATMKRYSVFYQPT 119
           RLLRERYGY GELRATGQ+LRDQFVFM RAGFDAF+VKK ADA+AF  T+KRYSVFYQP 
Sbjct: 91  RLLRERYGYRGELRATGQVLRDQFVFMLRAGFDAFDVKKQADAEAFTETVKRYSVFYQPA 150

Query: 120 GDGRVTALNRRMQLRHSESAG 140
           GDGR++AL++R+Q RH+E AG
Sbjct: 151 GDGRISALHQRLQQRHAERAG 171


>ref|ZP_08628440.1| oxidoreductase [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08943.1| oxidoreductase [Bradyrhizobiaceae bacterium SG-6C]
          Length = 170

 Score =  204 bits (520), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 97/131 (74%), Positives = 112/131 (85%)

Query: 1   VSAERFLADPEALLRRPGKLGVIWPNNRNLDDLVPHLDRLASVALVFPTFRDGRAYSQAR 60
           VS+ERFL DPEA L R GK GVIWPNNR++D+L+P+L RLA +ALVFP FRDGRAYSQAR
Sbjct: 31  VSSERFLNDPEAALSRGGKTGVIWPNNRDIDELLPYLGRLAVIALVFPIFRDGRAYSQAR 90

Query: 61  LLRERYGYDGELRATGQILRDQFVFMTRAGFDAFEVKKDADADAFAATMKRYSVFYQPTG 120
           LLRER+ + GELRATGQ+LRDQF+FM RAGFDAFEVKK+ DA  FA    R+SVFYQPTG
Sbjct: 91  LLRERHTFKGELRATGQVLRDQFLFMLRAGFDAFEVKKEKDAQVFAEVAHRFSVFYQPTG 150

Query: 121 DGRVTALNRRM 131
           DGRVTA +RR+
Sbjct: 151 DGRVTAFHRRL 161


>ref|YP_533857.1| hypothetical protein RPC_4012 [Rhodopseudomonas palustris BisB18]
 gb|ABD89538.1| Uncharacterised conserved protein UCP030820 [Rhodopseudomonas
           palustris BisB18]
          Length = 170

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/140 (77%), Positives = 121/140 (86%)

Query: 1   VSAERFLADPEALLRRPGKLGVIWPNNRNLDDLVPHLDRLASVALVFPTFRDGRAYSQAR 60
           VSA RFL DPEAL+ R   LGVIWPNNR +DDLVP+LDRLA VALV+P+FRDGRA+SQAR
Sbjct: 31  VSAARFLQDPEALIGRNSPLGVIWPNNRAVDDLVPYLDRLAVVALVYPSFRDGRAHSQAR 90

Query: 61  LLRERYGYDGELRATGQILRDQFVFMTRAGFDAFEVKKDADADAFAATMKRYSVFYQPTG 120
           LLRERYG+ GELRATGQILRDQFVF+ R GFDAFEVKKDADA AFAAT KRY+VFYQP+ 
Sbjct: 91  LLRERYGFRGELRATGQILRDQFVFLLRNGFDAFEVKKDADAAAFAATAKRYTVFYQPSS 150

Query: 121 DGRVTALNRRMQLRHSESAG 140
           DGR +A  RR+Q RHSESA 
Sbjct: 151 DGRASAWQRRLQARHSESAS 170