BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0040.0010.p (463 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_583923.1| putative FAD/FMN-containing dehydrogenase [Cupr... 551 e-155 ref|YP_548352.1| FAD linked oxidase-like protein [Polaromonas sp... 396 e-108 ref|YP_003319903.1| FAD linked oxidase domain-containing protein... 395 e-108 ref|YP_003409443.1| FAD linked oxidase domain-containing protein... 395 e-108 ref|YP_004230651.1| FAD linked oxidase domain-containing protein... 392 e-107 >ref|YP_583923.1| putative FAD/FMN-containing dehydrogenase [Cupriavidus metallidurans CH34] gb|ABF08654.1| putative FAD/FMN-containing dehydrogenase [Cupriavidus metallidurans CH34] Length = 463 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 292/439 (66%), Positives = 343/439 (78%), Gaps = 3/439 (0%) Query: 26 LKGQVVLAGSAGYDEARRVWNGAVDRRPAMIAYCADTRDVVEAVTFARSRTFPVAVRSGG 85 L GQ+V G YD AR+VWNGA+D+ PA++ YCAD DV AV FAR+ +AVRSGG Sbjct: 24 LGGQLVQRGDPDYDMARKVWNGAIDKHPALVVYCADATDVAGAVRFARATGLTIAVRSGG 83 Query: 86 HNVAGLSVCDGGIVIDLSRMKRIDVDPVRRTARADAGLDLGEFDRATQAHGLATTMGVNS 145 HN+AGLS CD GIVIDLSRMKRIDVD RR ARA+AGL+LGEFD+AT HGLATTMGVNS Sbjct: 84 HNLAGLSTCDNGIVIDLSRMKRIDVDVARRRARAEAGLNLGEFDQATLRHGLATTMGVNS 143 Query: 146 DTGIAGLTLGGGFGKLGRKFGLTCDNLIAAEVVTAEGQVLRASATEHPDLLWGLKGGGGN 205 DTGIAGLTLGGGFGKLGRK+GL+CDNL A E+VTA+G+ L AS TEHPDL W ++GGGGN Sbjct: 144 DTGIAGLTLGGGFGKLGRKYGLSCDNLEAVEIVTADGERLHASTTEHPDLFWAIRGGGGN 203 Query: 206 FGIVTAFEYRLHPIGTSLPVASTLYLYDRAREAMQFYDEFARNAADEVNVDAALVTLPSG 265 FGIVTAF +RLHPI LPV + +Y +D+AREAM YD FAR A D+V DAALVT PSG Sbjct: 204 FGIVTAFHFRLHPIPARLPVCAVVYPWDQAREAMLHYDAFARAAPDDVAADAALVTQPSG 263 Query: 266 DRFFNISGCYV---GSHRDGERALSPIVKFGSPLETRLATVPYLEIQSGGDALFPRGRRY 322 +R +IS C+V G+ + AL P+V+FG+P++ +L VPYL++QS DALF RGRRY Sbjct: 264 ERCLSISACHVGPDGTEETRQAALRPLVEFGNPVDAQLDFVPYLQMQSASDALFARGRRY 323 Query: 323 YWKAQFLREIGAGAIDALLDAYARAPNTSSLLVLQHVGGAIARVPVSNSPYANRDAAFDC 382 YWKAQFLR+I A A+DALL AYA AP+ L+V Q VGGAIARVP + Y NR A FDC Sbjct: 324 YWKAQFLRQIRAEAVDALLAAYALAPSPGCLVVFQQVGGAIARVPDEATAYGNRSADFDC 383 Query: 383 FPVAIWDDPAGDEANMRWARELWSAVRPYSTGGVYANNLGDEGEDRVRDAYGENYARLVA 442 FP+AIWDDPA D+ + WAR LW AV+PYSTGGVYANNLGDEG R R AYG N++RLVA Sbjct: 384 FPLAIWDDPADDDKHREWARGLWEAVQPYSTGGVYANNLGDEGAQRTRAAYGVNHSRLVA 443 Query: 443 LKNKYDPTNFFRLNQNIKP 461 +K +YDP N FRLNQNI P Sbjct: 444 VKRQYDPDNAFRLNQNIDP 462 >ref|YP_548352.1| FAD linked oxidase-like protein [Polaromonas sp. JS666] gb|ABE43454.1| FAD linked oxidase-like protein [Polaromonas sp. JS666] Length = 461 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 205/445 (46%), Positives = 268/445 (60%), Gaps = 9/445 (2%) Query: 26 LKGQVVLAGSAGYDEARRVWNGAVDRRPAMIAYCADTRDVVEAVTFARSRTFPVAVRSGG 85 KGQV+L Y+ AR+VWN +D+ PA+IA CA T DVV AV FA+ +AVR GG Sbjct: 16 FKGQVILPDDDLYESARKVWNATIDKHPALIARCATTSDVVGAVNFAKDNGLVLAVRGGG 75 Query: 86 HNVAGLSVCDGGIVIDLSRMKRIDVDPVRRTARADAGLDLGEFDRATQAHGLATTMGVNS 145 HN+AG ++CD GI+IDLS+MK VD + G L +FD ATQAHGLA +G+NS Sbjct: 76 HNIAGSALCDDGIIIDLSQMKAAHVDAGSLRGTIEGGATLADFDAATQAHGLALPLGINS 135 Query: 146 DTGIAGLTLGGGFGKLGRKFGLTCDNLIAAEVVTAEGQVLRASATEHPDLLWGLKGGGGN 205 TG+AGLTLGGGFG L RK+G+T DNL +AEVVTA G+V+RASATEHPDL W L+GG GN Sbjct: 136 TTGVAGLTLGGGFGWLSRKYGMTIDNLESAEVVTAAGEVVRASATEHPDLFWALRGGSGN 195 Query: 206 FGIVTAFEYRLHPIGTSLPVASTLYLYDRAREAMQFYDEFARNAADEVNVDAALVTLP-- 263 FG+VT FE+RLHP+G ++ +Y A+ +Q Y EF A DE++V L P Sbjct: 196 FGVVTRFEFRLHPVGPNVLSGLIVYPLSEAKAVLQQYREFMAKAPDELSVWVVLRQAPPL 255 Query: 264 -------SGDRFFNISGCYVGSHRDGERALSPIVKFGSPLETRLATVPYLEIQSGGDALF 316 G ++ Y G + GE + P+ KFG+PL + PY Q D L Sbjct: 256 PFLSEKVHGKEIIALALLYAGDPKQGESLIEPLRKFGTPLGEHVGVQPYTAWQQAFDPLL 315 Query: 317 PRGRRYYWKAQFLREIGAGAIDALLDAYARAPNTSSLLVLQHVGGAIARVPVSNSPYANR 376 G R YWK+ + G +A+++ + P+ + +GGA R +S YA+R Sbjct: 316 TPGARNYWKSHNFSVLDDGLFEAVIEYIKKLPSPQCEIFFGAIGGATMRPAPDSSAYAHR 375 Query: 377 DAAFDCFPVAIWDDPAGDEANMRWARELWSAVRPYSTGGVYANNLGDEGEDRVRDAYGEN 436 DA F W DPA DE + WAR+ + A P+++GGVY N L + DRV+ AYG+N Sbjct: 376 DARFVMNVHGRWTDPADDERCIGWARDYFKASAPFASGGVYVNFLTADEGDRVKAAYGQN 435 Query: 437 YARLVALKNKYDPTNFFRLNQNIKP 461 Y RL +K KYDPTN F NQNIKP Sbjct: 436 YDRLAQIKRKYDPTNLFSTNQNIKP 460 >ref|YP_003319903.1| FAD linked oxidase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gb|ACZ39081.1| FAD linked oxidase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 476 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 210/451 (46%), Positives = 278/451 (61%), Gaps = 15/451 (3%) Query: 23 QLRLKGQVVLAGSAGYDEARRVWNGAVDRRPAMIAYCADTRDVVEAVTFARSRTFPVAVR 82 Q +L+G+V+L + G+D AR +WN +D+RPA IA C DV+ A+ FAR R P+AVR Sbjct: 28 QDQLRGEVLLPSTPGFDAARALWNAMIDKRPAAIARCTGVADVLAALRFARERDIPLAVR 87 Query: 83 SGGHNVAGLSVCDGGIVIDLSRMKRIDVDPVRRTARADAGLDLGEFDRATQAHGLATTMG 142 +GGHNVAG ++ D G+V+DLSRMK I VDP RT R G+ G+ D TQA GLA T G Sbjct: 88 AGGHNVAGTALRDDGLVLDLSRMKGIRVDPAARTVRLQPGILNGDLDHETQAFGLAVTSG 147 Query: 143 VNSDTGIAGLTLGGGFGKLGRKFGLTCDNLIAAEVVTAEGQVLRASATEHPDLLWGLKGG 202 + S TG++GLTLGGG G L R FGLTCDNL A+VVTA+G + AS EHPDL W L+GG Sbjct: 148 IASTTGVSGLTLGGGIGWLMRAFGLTCDNLRTADVVTADGAFITASEEEHPDLFWALRGG 207 Query: 203 GGNFGIVTAFEYRLHPIGTSLPVASTLYLYDRAREAMQFYDEFARNAADEVNVDAALVTL 262 GGNFG+VT+F + L P+G ++ + ++ A E ++FY ++ A D + L Sbjct: 208 GGNFGVVTSFTFALQPLGPTVLAGAIVFPASAAGEVLRFYRDYIEEAPDALGTIVLLRHA 267 Query: 263 PSG---------DRFFNISGCYVGSHRDGERALSPIVKFGSPLETRLATVPYLEIQSGGD 313 P I CY G+ +G L P+ FGSP+ + PY Q D Sbjct: 268 PESPWIPSEHWRKPVVAILACYAGNIAEGTEVLKPLKAFGSPIADIIQPKPYTLHQRMFD 327 Query: 314 ALFPRGRRYYWKAQFLREIGAGAIDALLDAYARAPNTSSL---LVLQHVGGAIARVPVSN 370 A P G RYYWK+ +L + AID LL ARA TSSL V+ VGGA++RV S Sbjct: 328 ASAPPGLRYYWKSHYLSGLSDDAIDTLL---ARAWRTSSLRSYTVVARVGGAVSRVAESA 384 Query: 371 SPYANRDAAFDCFPVAIWDDPAGDEANMRWARELWSAVRPYSTGGVYANNLGDEGEDRVR 430 + +A+RDA +W DPA D ++ W R++++ + P+STGGVY N LG+EGE+RVR Sbjct: 385 TAFAHRDAQHVLNINGVWTDPAEDAEHIEWTRDMFTVMEPFSTGGVYVNFLGNEGEERVR 444 Query: 431 DAYGENYARLVALKNKYDPTNFFRLNQNIKP 461 AYG NY RLV +K +YDP N F +NQNI P Sbjct: 445 AAYGTNYDRLVEVKRRYDPDNVFNMNQNIVP 475 >ref|YP_003409443.1| FAD linked oxidase domain-containing protein [Geodermatophilus obscurus DSM 43160] gb|ADB75072.1| FAD linked oxidase domain protein [Geodermatophilus obscurus DSM 43160] Length = 461 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 213/437 (48%), Positives = 280/437 (64%), Gaps = 2/437 (0%) Query: 25 RLKGQVVLAGSAGYDEARRVWNGAVDRRPAMIAYCADTRDVVEAVTFARSRTFPVAVRSG 84 RL+G++V G YD+ R V+N +DR+PA IA C D DV + FAR P++VR G Sbjct: 18 RLRGRLVRPGDVDYDDVRAVFNALIDRKPAAIARCRDASDVAHGIDFARDHGLPLSVRGG 77 Query: 85 GHNVAGLSVCDGGIVIDLSRMKRIDVDPVRRTARADAGLDLGEFDRATQAHGLATTMGVN 144 GH+VAG +VCDGG+V+DLS MK + VDP R A A +GL LGE DR TQ HGLAT G Sbjct: 78 GHSVAGNAVCDGGLVLDLSGMKTLHVDPGCRLALAGSGLTLGELDRGTQQHGLATPSGAV 137 Query: 145 SDTGIAGLTLGGGFGKLGRKFGLTCDNLIAAEVVTAEGQVLRASATEHPDLLWGLKGGGG 204 S TGIAGLTLGGG G L ++GL CDN++AA+VVTA+G ++R A EHPDL W ++GGGG Sbjct: 138 SMTGIAGLTLGGGLGWLNGRYGLACDNVVAADVVTADGALVRVDAEEHPDLFWAIRGGGG 197 Query: 205 NFGIVTAFEYRLHPIGTSLPVASTLYLYDRAREAMQFYDEFARNAADEVNVDAALVTLPS 264 NFG+VT F YRLHP+G L S + D A ++ +DEF A DE++ A L Sbjct: 198 NFGVVTRFTYRLHPVGPVL-AGSLTFPADTAGRVLRHFDEFMAAAPDELSA-AVSFGLDG 255 Query: 265 GDRFFNISGCYVGSHRDGERALSPIVKFGSPLETRLATVPYLEIQSGGDALFPRGRRYYW 324 G +++ C+ G DGER L P+ G PL + +PY+++QS GDA FPRGRR+YW Sbjct: 256 GRPVLSVTVCWCGPVDDGERTLRPLRAMGPPLADSIGVMPYVDLQSAGDAGFPRGRRHYW 315 Query: 325 KAQFLREIGAGAIDALLDAYARAPNTSSLLVLQHVGGAIARVPVSNSPYANRDAAFDCFP 384 KA FL + GA++ LL+ + P+ S + QH+ GA R+P + + + +R +D Sbjct: 316 KAGFLPRLTVGAVEVLLEHLPQMPSALSGIGAQHMHGAAGRIPATATAFPHRADQYDLQL 375 Query: 385 VAIWDDPAGDEANMRWARELWSAVRPYSTGGVYANNLGDEGEDRVRDAYGENYARLVALK 444 ++ W DP E N+ W R+L+ ++RP+ VY NNLG EG DRVR AYG N RL LK Sbjct: 376 LSQWADPQDTERNVAWTRDLFESLRPHLQDAVYVNNLGSEGPDRVRAAYGANLPRLAELK 435 Query: 445 NKYDPTNFFRLNQNIKP 461 YDPTN FRLN NI P Sbjct: 436 RVYDPTNLFRLNHNIAP 452 >ref|YP_004230651.1| FAD linked oxidase domain-containing protein [Burkholderia sp. CCGE1001] gb|ADX57591.1| FAD linked oxidase domain protein [Burkholderia sp. CCGE1001] Length = 462 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 198/445 (44%), Positives = 274/445 (61%), Gaps = 9/445 (2%) Query: 26 LKGQVVLAGSAGYDEARRVWNGAVDRRPAMIAYCADTRDVVEAVTFARSRTFPVAVRSGG 85 ++GQ+VL AG++EAR +WN +DRRPAMI CA DV + FAR+ P+AVR GG Sbjct: 16 IRGQLVLPEDAGFNEARGIWNAMIDRRPAMILRCAGVADVRRGIAFARANNLPLAVRGGG 75 Query: 86 HNVAGLSVCDGGIVIDLSRMKRIDVDPVRRTARADAGLDLGEFDRATQAHGLATTMGVNS 145 HN+AG ++C+ G+V+D SRMK + +DPV R A + G L +FD QA GLAT +G+NS Sbjct: 76 HNIAGSALCEDGLVMDFSRMKSVRIDPVARRAYVEPGATLADFDHEAQAFGLATPLGINS 135 Query: 146 DTGIAGLTLGGGFGKLGRKFGLTCDNLIAAEVVTAEGQVLRASATEHPDLLWGLKGGGGN 205 TG+AGLTLGGGFG L RK+G+T DNLI+A+VVTA+G++LRASA + DL W ++GGGGN Sbjct: 136 TTGVAGLTLGGGFGWLSRKYGMTVDNLISADVVTADGELLRASAESNEDLFWAIRGGGGN 195 Query: 206 FGIVTAFEYRLHPIGTSLPVASTLYLYDRAREAMQFYDEFARNAADEVNVDAALVTLP-- 263 FG+VT+FE+ LHP+G + ++ +AR+A+ Y + D+++V A L P Sbjct: 196 FGVVTSFEFALHPVGPMVYGGLVVFPLAQARDALVRYRAASTQMPDDLSVWAVLRLAPPL 255 Query: 264 -------SGDRFFNISGCYVGSHRDGERALSPIVKFGSPLETRLATVPYLEIQSGGDALF 316 G + CY G +G A++ + FG+P+ L +P++ Q D L Sbjct: 256 PFLPADVHGQPVIIFANCYTGPTANGPSAVAQVKTFGTPVGEHLGEMPFVAWQQAFDPLL 315 Query: 317 PRGRRYYWKAQFLREIGAGAIDALLDAYARAPNTSSLLVLQHVGGAIARVPVSNSPYANR 376 G R YWK+ L I G IDALL + P+ + +GG RVPV+ + Y++R Sbjct: 316 TPGSRNYWKSHNLAGIDDGLIDALLQSIGNLPSPQCEIFFGQIGGQTQRVPVNATAYSSR 375 Query: 377 DAAFDCFPVAIWDDPAGDEANMRWARELWSAVRPYSTGGVYANNLGDEGEDRVRDAYGEN 436 D + WDDPA D+ + WAR + A P+S G VY N + E RV DAYG N Sbjct: 376 DTHYAMNVHGRWDDPADDDRCIGWARAFFDAAAPFSLGSVYVNFMTQEEGSRVADAYGPN 435 Query: 437 YARLVALKNKYDPTNFFRLNQNIKP 461 Y RLVA+K++YDP N FR NQNI+P Sbjct: 436 YERLVAVKSRYDPHNVFRHNQNIRP 460