BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0039.0004.p (150 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004612133.1| MarR family transcriptional regulator [Mesor... 188 2e-46 ref|YP_004142379.1| MarR family transcription regulator [Mesorhi... 186 8e-46 ref|NP_103058.1| transcriptional regulator [Mesorhizobium loti M... 181 2e-44 ref|YP_003757157.1| MarR family transcriptional regulator [Hypho... 138 3e-31 ref|ZP_08869920.1| transcriptional regulator, MarR family protei... 137 5e-31 >ref|YP_004612133.1| MarR family transcriptional regulator [Mesorhizobium opportunistum WSM2075] gb|AEH88039.1| transcriptional regulator, MarR family [Mesorhizobium opportunistum WSM2075] Length = 145 Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 100/150 (66%), Positives = 117/150 (78%), Gaps = 5/150 (3%) Query: 1 MTALKGPSKSPRQDPKRVPNQADYEALSQFRYLIRRFLEFSQDAAKAAGLTPRQHQALLA 60 M+ + P KS + Q+DY+ LS+FRYLIRRFLEFSQ A+ AGLTPRQHQALLA Sbjct: 1 MSDMTQPRKS-----RPAIRQSDYQRLSEFRYLIRRFLEFSQIQAEDAGLTPRQHQALLA 55 Query: 61 IRGYPGGGPVAVGDLAERLRLRHHTTVELVDRLSEAGLVERVLDPADQRRVLLKLTGLAA 120 I+G+PGGGPV VGDLAERLR+RHH+ VELV+RL EAGLV R D D RRVLL+LT A Sbjct: 56 IKGFPGGGPVTVGDLAERLRIRHHSAVELVNRLGEAGLVVRDQDKDDHRRVLLRLTERAD 115 Query: 121 DHLAELSAVHLDELSRIEPLLKQVLSRRSE 150 D LAELSAVHLDELSRIEP+L+++L R E Sbjct: 116 DRLAELSAVHLDELSRIEPMLRRLLDRDGE 145 >ref|YP_004142379.1| MarR family transcription regulator [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV12329.1| regulatory protein MarR [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 145 Score = 186 bits (473), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 95/128 (74%), Positives = 109/128 (85%) Query: 20 NQADYEALSQFRYLIRRFLEFSQDAAKAAGLTPRQHQALLAIRGYPGGGPVAVGDLAERL 79 +QADY+ LS+FRYLIRRFLEFSQ A+ AGLTPRQHQALLAI+G+PGGGPV VGDLAERL Sbjct: 15 SQADYQRLSEFRYLIRRFLEFSQVQAEDAGLTPRQHQALLAIKGFPGGGPVTVGDLAERL 74 Query: 80 RLRHHTTVELVDRLSEAGLVERVLDPADQRRVLLKLTGLAADHLAELSAVHLDELSRIEP 139 R+RHH+ VELV+RL EAGLV R D D RRVLL+LT A D LAELSA HLDELSRIEP Sbjct: 75 RIRHHSAVELVNRLGEAGLVTRDQDKDDHRRVLLQLTERADDCLAELSAAHLDELSRIEP 134 Query: 140 LLKQVLSR 147 +L+++L R Sbjct: 135 MLRRLLDR 142 >ref|NP_103058.1| transcriptional regulator [Mesorhizobium loti MAFF303099] dbj|BAB48844.1| probable transcriptional regulator [Mesorhizobium loti MAFF303099] Length = 148 Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 97/146 (66%), Positives = 113/146 (77%), Gaps = 5/146 (3%) Query: 1 MTALKGPSKSPRQDPKRVPNQADYEALSQFRYLIRRFLEFSQDAAKAAGLTPRQHQALLA 60 M+ + P KS + ADY+ LS+FRYLIRRFLEFSQ A+ AGLTPRQHQALLA Sbjct: 4 MSGMTQPRKS-----RPAIELADYQRLSEFRYLIRRFLEFSQLQAEDAGLTPRQHQALLA 58 Query: 61 IRGYPGGGPVAVGDLAERLRLRHHTTVELVDRLSEAGLVERVLDPADQRRVLLKLTGLAA 120 I+GYPGGGPV VGDLAERLR+RHH+ VELV+RL +AGLV R D D RRVLL+LT A Sbjct: 59 IKGYPGGGPVTVGDLAERLRIRHHSAVELVNRLGDAGLVVRDQDKDDHRRVLLRLTERAD 118 Query: 121 DHLAELSAVHLDELSRIEPLLKQVLS 146 D LAELSA HLDELSRIEP+L+++L Sbjct: 119 DCLAELSAAHLDELSRIEPMLRRLLD 144 >ref|YP_003757157.1| MarR family transcriptional regulator [Hyphomicrobium denitrificans ATCC 51888] gb|ADJ24836.1| transcriptional regulator, MarR family [Hyphomicrobium denitrificans ATCC 51888] Length = 155 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 67/147 (45%), Positives = 101/147 (68%), Gaps = 9/147 (6%) Query: 8 SKSPRQDP---------KRVPNQADYEALSQFRYLIRRFLEFSQDAAKAAGLTPRQHQAL 58 +K+P+ P K +A+YEAL++FR+ +R+FL FS+ AA AG+TP+QHQ + Sbjct: 3 TKNPKSSPASKTAARRRKSTVTKANYEALAEFRWELRKFLAFSEAAANGAGVTPQQHQLM 62 Query: 59 LAIRGYPGGGPVAVGDLAERLRLRHHTTVELVDRLSEAGLVERVLDPADQRRVLLKLTGL 118 L+++G PG ++VG++A+RL LRHHT VELVDRLS+ GLVER DP D R++ + LT Sbjct: 63 LSVKGAPGRDSLSVGEIADRLLLRHHTVVELVDRLSDLGLVERNPDPTDGRKIQVSLTKS 122 Query: 119 AADHLAELSAVHLDELSRIEPLLKQVL 145 + +LS +H++EL I P L+++L Sbjct: 123 GNATIDKLSTIHVEELKSIRPTLRKLL 149 >ref|ZP_08869920.1| transcriptional regulator, MarR family protein [Azospirillum amazonense Y2] gb|EGY00489.1| transcriptional regulator, MarR family protein [Azospirillum amazonense Y2] Length = 145 Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 75/141 (53%), Positives = 98/141 (69%), Gaps = 2/141 (1%) Query: 9 KSPRQDPKRVP--NQADYEALSQFRYLIRRFLEFSQDAAKAAGLTPRQHQALLAIRGYPG 66 +P P+RV +ADYE L++FR+++RRFL FS+DAA AGLT +QHQALLAI+GYPG Sbjct: 2 STPPPAPERVDPLEKADYELLAEFRHVLRRFLSFSEDAAAVAGLTAQQHQALLAIKGYPG 61 Query: 67 GGPVAVGDLAERLRLRHHTTVELVDRLSEAGLVERVLDPADQRRVLLKLTGLAADHLAEL 126 V VG+LAERL +R H+ V L+DRL G V R P D+R+V++ LT A D LA L Sbjct: 62 RDHVTVGELAERLCVRPHSAVGLIDRLEGNGWVRRAPGPEDRRQVVISLTPAAEDLLAGL 121 Query: 127 SAVHLDELSRIEPLLKQVLSR 147 S VH DE+ R+ PLL+ + R Sbjct: 122 SRVHRDEIRRLSPLLRTLFDR 142