BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0038.0046.p         (209 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001236416.1| hypothetical protein BBta_0213 [Bradyrhizobi...   204   1e-50
ref|YP_567304.1| hypothetical protein RPD_0163 [Rhodopseudomonas...   197   9e-49
ref|YP_001989075.1| hypothetical protein Rpal_0037 [Rhodopseudom...   184   8e-45
ref|NP_945392.1| hypothetical protein RPA0036 [Rhodopseudomonas ...   179   2e-43
ref|YP_004106414.1| hypothetical protein Rpdx1_0037 [Rhodopseudo...   162   3e-38

>ref|YP_001236416.1| hypothetical protein BBta_0213 [Bradyrhizobium sp. BTAi1]
 gb|ABQ32510.1| hypothetical protein BBta_0213 [Bradyrhizobium sp. BTAi1]
          Length = 139

 Score =  204 bits (518), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 104/139 (74%), Positives = 120/139 (86%)

Query: 67  VDPEHPDWKVSTRLRANARALRRNLTDAERILWSELRGNRLNGATFRRQVPIDNYVADFV 126
           +D + P WKVS +LR+NARALR+N TDAE+ILWSELRG+RL GA FRRQ P+D Y+ DFV
Sbjct: 1   MDDDKPTWKVSQKLRSNARALRQNSTDAEQILWSELRGHRLLGAGFRRQAPVDRYIVDFV 60

Query: 127 CHAAKLVIELDGGQHFSDEGERADAARSAVIETKGFKVLRFSNLDVMTNRAGVLETIAAA 186
           CHAA+LVIELDGGQHFS EGE+ DAARSAVIE KGF +LRF+N DV+ NRAGVLETIAAA
Sbjct: 61  CHAARLVIELDGGQHFSTEGEQRDAARSAVIEAKGFHILRFANNDVLANRAGVLETIAAA 120

Query: 187 IAERAPTLTLPRKRERGQE 205
           +A RAPTLTLPRKR R Q+
Sbjct: 121 VAARAPTLTLPRKRGREQD 139


>ref|YP_567304.1| hypothetical protein RPD_0163 [Rhodopseudomonas palustris BisB5]
 gb|ABE37403.1| protein of unknown function DUF559 [Rhodopseudomonas palustris
           BisB5]
          Length = 194

 Score =  197 bits (500), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 92/152 (60%), Positives = 118/152 (77%)

Query: 46  LPLPLAGEGRGGGLSAPGLLMVDPEHPDWKVSTRLRANARALRRNLTDAERILWSELRGN 105
           LP PLAGEG G G +   L M DP+ P W VS  LR +AR LR+  TDAER++WS LR  
Sbjct: 12  LPRPLAGEGWGEGDTGTELAMDDPKQPSWNVSPSLRRHARELRKTSTDAERLMWSALRDK 71

Query: 106 RLNGATFRRQVPIDNYVADFVCHAAKLVIELDGGQHFSDEGERADAARSAVIETKGFKVL 165
           +LNG +FRRQVPI  ++ADF CH+ KLV+E+DGGQHFSD+ ERADA+R+A+IE +GF+++
Sbjct: 72  QLNGFSFRRQVPIGPFIADFACHSVKLVVEIDGGQHFSDDAERADASRTALIEARGFRIV 131

Query: 166 RFSNLDVMTNRAGVLETIAAAIAERAPTLTLP 197
           RFSN +VM+NR GVL++IAA +A  APT TLP
Sbjct: 132 RFSNAEVMSNRDGVLQSIAAELAASAPTPTLP 163


>ref|YP_001989075.1| hypothetical protein Rpal_0037 [Rhodopseudomonas palustris TIE-1]
 gb|ACE98599.1| protein of unknown function DUF559 [Rhodopseudomonas palustris
           TIE-1]
          Length = 159

 Score =  184 bits (467), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 88/144 (61%), Positives = 111/144 (77%)

Query: 66  MVDPEHPDWKVSTRLRANARALRRNLTDAERILWSELRGNRLNGATFRRQVPIDNYVADF 125
           M DP+ P W VS   R +AR LR+  T+AER++W ELR  RLNG +F+RQVPI  Y+ADF
Sbjct: 1   MDDPKQPTWNVSPSQRRHARELRKKSTEAERLMWGELRDKRLNGVSFKRQVPIGPYIADF 60

Query: 126 VCHAAKLVIELDGGQHFSDEGERADAARSAVIETKGFKVLRFSNLDVMTNRAGVLETIAA 185
            CHA KLV+ELDGGQHF D+GER+DAAR+A IE +GF+V+RFSN +VMTNRAGVL++IA 
Sbjct: 61  ACHAKKLVVELDGGQHFPDDGERSDAARTAAIEARGFRVIRFSNHEVMTNRAGVLQSIAD 120

Query: 186 AIAERAPTLTLPRKRERGQEKSSS 209
            +A RA   TL RKRER + K ++
Sbjct: 121 VLAARALPPTLSRKRERVRAKRAA 144


>ref|NP_945392.1| hypothetical protein RPA0036 [Rhodopseudomonas palustris CGA009]
 emb|CAE25480.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 159

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 84/131 (64%), Positives = 104/131 (79%)

Query: 66  MVDPEHPDWKVSTRLRANARALRRNLTDAERILWSELRGNRLNGATFRRQVPIDNYVADF 125
           M DP+ P W VS  LR +AR LR+  T+AER++W ELR  RLNG +F+RQVPI  Y+ADF
Sbjct: 1   MDDPKQPTWNVSPSLRRHARELRKKSTEAERLMWGELRDKRLNGFSFKRQVPIGPYIADF 60

Query: 126 VCHAAKLVIELDGGQHFSDEGERADAARSAVIETKGFKVLRFSNLDVMTNRAGVLETIAA 185
            CHA KLV+ELDGGQHFSD+GER+DAAR+A IE +GF+V+RFSN +VMTNRAGVL++IA 
Sbjct: 61  ACHAKKLVVELDGGQHFSDDGERSDAARTAAIEARGFRVIRFSNHEVMTNRAGVLQSIAD 120

Query: 186 AIAERAPTLTL 196
            +A R  T TL
Sbjct: 121 VLAARVLTPTL 131


>ref|YP_004106414.1| hypothetical protein Rpdx1_0037 [Rhodopseudomonas palustris DX-1]
 gb|ADU41681.1| hypothetical protein Rpdx1_0037 [Rhodopseudomonas palustris DX-1]
          Length = 159

 Score =  162 bits (410), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/139 (63%), Positives = 106/139 (76%)

Query: 66  MVDPEHPDWKVSTRLRANARALRRNLTDAERILWSELRGNRLNGATFRRQVPIDNYVADF 125
           M DP+   W VS   R +AR LR+  TDAER +W ELR  RLNG +F+RQVPI  Y+ADF
Sbjct: 1   MDDPKQASWNVSPSQRRHARELRKKSTDAERFMWGELRDKRLNGFSFKRQVPIGPYIADF 60

Query: 126 VCHAAKLVIELDGGQHFSDEGERADAARSAVIETKGFKVLRFSNLDVMTNRAGVLETIAA 185
            CHA KLV+ELDGGQH +DE ERADAAR+A IE +GF+V+RFSN +VMTNRAGVL++IA 
Sbjct: 61  ACHAKKLVVELDGGQHVADEAERADAARTAAIEARGFRVIRFSNHEVMTNRAGVLQSIAD 120

Query: 186 AIAERAPTLTLPRKRERGQ 204
            +A RA T  L RKRERG+
Sbjct: 121 VLAARALTPALSRKRERGR 139