BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0038.0045.p (360 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767346.1| phenylalanyl-tRNA synthetase subunit alpha [Bra... 694 0.0 ref|YP_001236417.1| phenylalanyl-tRNA synthetase subunit alpha [... 671 0.0 ref|YP_001202356.1| phenylalanyl-tRNA synthetase subunit alpha [... 670 0.0 ref|YP_530341.1| phenylalanyl-tRNA synthetase subunit alpha [Rho... 668 0.0 ref|ZP_01045119.1| phenylalanyl-tRNA synthetase, alpha subunit [... 664 0.0 >ref|NP_767346.1| phenylalanyl-tRNA synthetase subunit alpha [Bradyrhizobium japonicum USDA 110] sp|Q89WI1.1|SYFA_BRAJA RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS dbj|BAC45971.1| phenylalanyl-tRNA synthetase alpha chain [Bradyrhizobium japonicum USDA 110] Length = 360 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/360 (91%), Positives = 350/360 (97%) Query: 1 VSDLATLEQSILDQIASAADEAALEAVRVSALGKKGSISALLATLGKMSPEERKTEGAKI 60 +SDLATLE SILDQ+A+A DEAALEAVRV+ALGKKGSISALLATLGKMSP++RKT+GA I Sbjct: 1 MSDLATLETSILDQVAAAGDEAALEAVRVAALGKKGSISALLATLGKMSPDDRKTQGAAI 60 Query: 61 NLAKDAVTQALAARRDVLKAAALDARLAAETIDVTLPLREAPAETGRIHPLSQVWDELTT 120 N AKD VT+ALAARRDVLK+AALDARLA+ETIDVTLPLREAP + GRIHPLSQVWDELTT Sbjct: 61 NQAKDKVTEALAARRDVLKSAALDARLASETIDVTLPLREAPTDAGRIHPLSQVWDELTT 120 Query: 121 IFADMGFAVAEGPDIETDDYNFTKLNFPVGHPAREMHDTFFFNPKEDGSRMLLRTHTSPV 180 IFADMGF+VAEGPDIETDDYNFTKLNFP GHPAREMHDTFFF+PKEDGSRMLLRTHTSPV Sbjct: 121 IFADMGFSVAEGPDIETDDYNFTKLNFPEGHPAREMHDTFFFHPKEDGSRMLLRTHTSPV 180 Query: 181 QVRTMLTQQPPIRVICPGRTYRIDSDATHTPQFHQVEGLVIDKGSHLGHLKWILHEFCKA 240 QVRTML+Q+PPIRVICPGRTYRIDSDATHTPQFHQVEGLVIDK SHLGHLKWILHEFCKA Sbjct: 181 QVRTMLSQKPPIRVICPGRTYRIDSDATHTPQFHQVEGLVIDKHSHLGHLKWILHEFCKA 240 Query: 241 FFEVDHINMRFRPSFFPFTEPSLEVDIQCRRDKGEIRFGEGEDWLEILGCGMVHPNVLRA 300 FFEVDHINMRFRPSFFPFTEPSLEVDIQCRRDKGEIRFGEGEDWLEILGCGMVHPNVLRA Sbjct: 241 FFEVDHINMRFRPSFFPFTEPSLEVDIQCRRDKGEIRFGEGEDWLEILGCGMVHPNVLRA 300 Query: 301 CGLDPDVYQGFAWGMGIDRIAMLKYGIADLRQLFDSDVRWLSHYGFKPLDIPSIAGGLST 360 CG+DPD YQGFAWGMGIDRIAMLKYGIADLRQLFDSDVRWLSHYGFKPL++P++AGGLS+ Sbjct: 301 CGIDPDEYQGFAWGMGIDRIAMLKYGIADLRQLFDSDVRWLSHYGFKPLEVPTLAGGLSS 360 >ref|YP_001236417.1| phenylalanyl-tRNA synthetase subunit alpha [Bradyrhizobium sp. BTAi1] sp|A5E8L7.1|SYFA_BRASB RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS gb|ABQ32511.1| phenylalanyl-tRNA synthetase, alpha subunit [Bradyrhizobium sp. BTAi1] Length = 360 Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/360 (91%), Positives = 351/360 (97%) Query: 1 VSDLATLEQSILDQIASAADEAALEAVRVSALGKKGSISALLATLGKMSPEERKTEGAKI 60 +SDLA+LE SILDQIA+A DEAALEAVRV+ALGKKGSISALLATLGKMSP+ERKT+GA I Sbjct: 1 MSDLASLETSILDQIAAAGDEAALEAVRVAALGKKGSISALLATLGKMSPDERKTQGAAI 60 Query: 61 NLAKDAVTQALAARRDVLKAAALDARLAAETIDVTLPLREAPAETGRIHPLSQVWDELTT 120 NLAKD VTQALAARRDVLKAAALDARLAAETIDVTLPL+++PAETGRIHPLSQV DELTT Sbjct: 61 NLAKDKVTQALAARRDVLKAAALDARLAAETIDVTLPLQDSPAETGRIHPLSQVMDELTT 120 Query: 121 IFADMGFAVAEGPDIETDDYNFTKLNFPVGHPAREMHDTFFFNPKEDGSRMLLRTHTSPV 180 IFADMGF++AEGPD+ETDDYNFTKLNFP GHPAREMHDTFFFNPK DGSRMLLRTHTSPV Sbjct: 121 IFADMGFSIAEGPDVETDDYNFTKLNFPEGHPAREMHDTFFFNPKPDGSRMLLRTHTSPV 180 Query: 181 QVRTMLTQQPPIRVICPGRTYRIDSDATHTPQFHQVEGLVIDKGSHLGHLKWILHEFCKA 240 QVRTMLTQ+PPIRVICPGRTYRIDSDATHTPQFHQVEGLVIDKGSHLGHLKWILHEFCKA Sbjct: 181 QVRTMLTQKPPIRVICPGRTYRIDSDATHTPQFHQVEGLVIDKGSHLGHLKWILHEFCKA 240 Query: 241 FFEVDHINMRFRPSFFPFTEPSLEVDIQCRRDKGEIRFGEGEDWLEILGCGMVHPNVLRA 300 FFEVDHINM+FRPSFFPFTEPSLEVDIQCRRDKGEIRFGEGEDWLEILGCGMVHPNVLRA Sbjct: 241 FFEVDHINMKFRPSFFPFTEPSLEVDIQCRRDKGEIRFGEGEDWLEILGCGMVHPNVLRA 300 Query: 301 CGLDPDVYQGFAWGMGIDRIAMLKYGIADLRQLFDSDVRWLSHYGFKPLDIPSIAGGLST 360 CG+DPD YQGFAWGMGIDRIAMLKYG++DLRQLF+ DVRWLSHYGFKPL++P++AGGLST Sbjct: 301 CGIDPDEYQGFAWGMGIDRIAMLKYGMSDLRQLFEGDVRWLSHYGFKPLEVPTLAGGLST 360 >ref|YP_001202356.1| phenylalanyl-tRNA synthetase subunit alpha [Bradyrhizobium sp. ORS 278] sp|A4YJN0.1|SYFA_BRASO RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS emb|CAL74106.1| Phenylalanyl-tRNA synthetase alpha chain (Phenylalanine--tRNA ligase alpha chain) [Bradyrhizobium sp. ORS 278] Length = 360 Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/360 (90%), Positives = 351/360 (97%) Query: 1 VSDLATLEQSILDQIASAADEAALEAVRVSALGKKGSISALLATLGKMSPEERKTEGAKI 60 +SDLA+LE SILDQIA+A DEAALEAVRV+ALGKKGSISALLATLGKMSP+ERKT+GA I Sbjct: 1 MSDLASLETSILDQIAAAGDEAALEAVRVAALGKKGSISALLATLGKMSPDERKTQGAAI 60 Query: 61 NLAKDAVTQALAARRDVLKAAALDARLAAETIDVTLPLREAPAETGRIHPLSQVWDELTT 120 NLAKD VTQAL+ARRDVLKAAALDARLAAETIDVTLPL++ PA+TGRIHPLSQV DELTT Sbjct: 61 NLAKDKVTQALSARRDVLKAAALDARLAAETIDVTLPLQDTPADTGRIHPLSQVMDELTT 120 Query: 121 IFADMGFAVAEGPDIETDDYNFTKLNFPVGHPAREMHDTFFFNPKEDGSRMLLRTHTSPV 180 IFADMGF++AEGPD+ETDDYNFTKLNFP GHPAREMHDTFFFNPKEDGSRMLLRTHTSPV Sbjct: 121 IFADMGFSIAEGPDVETDDYNFTKLNFPEGHPAREMHDTFFFNPKEDGSRMLLRTHTSPV 180 Query: 181 QVRTMLTQQPPIRVICPGRTYRIDSDATHTPQFHQVEGLVIDKGSHLGHLKWILHEFCKA 240 QVRTML+Q+PPIRVICPGRTYRIDSDATHTPQFHQVEGLVIDKGSHLGHLKWILHEFCKA Sbjct: 181 QVRTMLSQKPPIRVICPGRTYRIDSDATHTPQFHQVEGLVIDKGSHLGHLKWILHEFCKA 240 Query: 241 FFEVDHINMRFRPSFFPFTEPSLEVDIQCRRDKGEIRFGEGEDWLEILGCGMVHPNVLRA 300 FFEVDHINM+FRPSFFPFTEPSLEVDIQCRRDKGEIRFGEGEDWLEILGCGMVHPNVLRA Sbjct: 241 FFEVDHINMKFRPSFFPFTEPSLEVDIQCRRDKGEIRFGEGEDWLEILGCGMVHPNVLRA 300 Query: 301 CGLDPDVYQGFAWGMGIDRIAMLKYGIADLRQLFDSDVRWLSHYGFKPLDIPSIAGGLST 360 CG+DPD YQGFAWGMGIDRIAMLKYG++DLRQLF+ DVRWLSHYGFKPL++P++AGGLST Sbjct: 301 CGIDPDEYQGFAWGMGIDRIAMLKYGMSDLRQLFEGDVRWLSHYGFKPLEVPTLAGGLST 360 >ref|YP_530341.1| phenylalanyl-tRNA synthetase subunit alpha [Rhodopseudomonas palustris BisB18] sp|Q21C64.1|SYFA_RHOPB RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS gb|ABD86022.1| phenylalanyl-tRNA synthetase, alpha subunit [Rhodopseudomonas palustris BisB18] Length = 360 Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/360 (87%), Positives = 342/360 (95%) Query: 1 VSDLATLEQSILDQIASAADEAALEAVRVSALGKKGSISALLATLGKMSPEERKTEGAKI 60 +SDLA L+ +IL IA+A+DEAALEAVRV+ALGKKG+ISALLATLGKMSPEERKTEGA I Sbjct: 1 MSDLAALQHTILADIAAASDEAALEAVRVAALGKKGAISALLATLGKMSPEERKTEGAAI 60 Query: 61 NLAKDAVTQALAARRDVLKAAALDARLAAETIDVTLPLREAPAETGRIHPLSQVWDELTT 120 NLAK VT ALAARR++LK AALD RLA+ETIDVTLPLRE PAE GRIHPLSQV DELTT Sbjct: 61 NLAKMVVTDALAARRELLKNAALDKRLASETIDVTLPLRENPAEQGRIHPLSQVMDELTT 120 Query: 121 IFADMGFAVAEGPDIETDDYNFTKLNFPVGHPAREMHDTFFFNPKEDGSRMLLRTHTSPV 180 IFADMGFA+AEGPDIETDDYNFTKLNFP GHPAREMHDTF+FNPK+DGSR+LLRTHTSPV Sbjct: 121 IFADMGFAIAEGPDIETDDYNFTKLNFPEGHPAREMHDTFYFNPKQDGSRLLLRTHTSPV 180 Query: 181 QVRTMLTQQPPIRVICPGRTYRIDSDATHTPQFHQVEGLVIDKGSHLGHLKWILHEFCKA 240 QVRTML+Q+PPIRVICPGRTYR DSD THTP FHQVEGLVIDKGSHLGHLKWILHEFCKA Sbjct: 181 QVRTMLSQKPPIRVICPGRTYRSDSDQTHTPMFHQVEGLVIDKGSHLGHLKWILHEFCKA 240 Query: 241 FFEVDHINMRFRPSFFPFTEPSLEVDIQCRRDKGEIRFGEGEDWLEILGCGMVHPNVLRA 300 FFEVD+INMRFRPSFFPFTEPSLEVDIQCRRDKGEIRFGEGEDWLEILGCGMVHPNVL A Sbjct: 241 FFEVDNINMRFRPSFFPFTEPSLEVDIQCRRDKGEIRFGEGEDWLEILGCGMVHPNVLTA 300 Query: 301 CGLDPDVYQGFAWGMGIDRIAMLKYGIADLRQLFDSDVRWLSHYGFKPLDIPSIAGGLST 360 CG+DP+VYQGFAWGMGIDRIAMLKYG++DLRQLF++DVRWL+HYGFKPLD+P++AGGLS+ Sbjct: 301 CGIDPEVYQGFAWGMGIDRIAMLKYGMSDLRQLFEADVRWLNHYGFKPLDVPTLAGGLSS 360 >ref|ZP_01045119.1| phenylalanyl-tRNA synthetase, alpha subunit [Nitrobacter sp. Nb-311A] gb|EAQ37124.1| phenylalanyl-tRNA synthetase, alpha subunit [Nitrobacter sp. Nb-311A] Length = 360 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/358 (87%), Positives = 340/358 (94%) Query: 3 DLATLEQSILDQIASAADEAALEAVRVSALGKKGSISALLATLGKMSPEERKTEGAKINL 62 +L L+ +IL IA+A+DEAALEAVRV+ALGKKGSISALL+TLGKMSP+ERKTEGAKINL Sbjct: 3 NLTDLQSNILADIANASDEAALEAVRVAALGKKGSISALLSTLGKMSPDERKTEGAKINL 62 Query: 63 AKDAVTQALAARRDVLKAAALDARLAAETIDVTLPLREAPAETGRIHPLSQVWDELTTIF 122 A+DAVT+ALAARR+VLKA ALDARLA+ETIDVTL LRE PAE GRIHPLSQVWDE+TTIF Sbjct: 63 ARDAVTRALAARREVLKARALDARLASETIDVTLALRETPAEAGRIHPLSQVWDEVTTIF 122 Query: 123 ADMGFAVAEGPDIETDDYNFTKLNFPVGHPAREMHDTFFFNPKEDGSRMLLRTHTSPVQV 182 ADMGFAVAEGPDIETDDYNFT+LNFP GHPAREMHDTF+FNPK+DGSR+LLRTHTSPVQV Sbjct: 123 ADMGFAVAEGPDIETDDYNFTRLNFPEGHPAREMHDTFYFNPKDDGSRLLLRTHTSPVQV 182 Query: 183 RTMLTQQPPIRVICPGRTYRIDSDATHTPQFHQVEGLVIDKGSHLGHLKWILHEFCKAFF 242 RTML+QQPPIRVICPGRTYR DSD THTP FHQVEGLVIDK SHLGHLKWILHEFCKAFF Sbjct: 183 RTMLSQQPPIRVICPGRTYRSDSDQTHTPMFHQVEGLVIDKSSHLGHLKWILHEFCKAFF 242 Query: 243 EVDHINMRFRPSFFPFTEPSLEVDIQCRRDKGEIRFGEGEDWLEILGCGMVHPNVLRACG 302 EVD++NMRFRPSFFPFTEPSLEVDIQCRRDK EIRFGEGEDWLEILGCGMVHPNVL+ CG Sbjct: 243 EVDNVNMRFRPSFFPFTEPSLEVDIQCRRDKHEIRFGEGEDWLEILGCGMVHPNVLKLCG 302 Query: 303 LDPDVYQGFAWGMGIDRIAMLKYGIADLRQLFDSDVRWLSHYGFKPLDIPSIAGGLST 360 LDP+ YQGFAWGMGIDRIAMLKYGIADLRQLF+ DVRWL+HYGFKPL+IP++AGGLS+ Sbjct: 303 LDPETYQGFAWGMGIDRIAMLKYGIADLRQLFEGDVRWLNHYGFKPLEIPTLAGGLSS 360