BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0038.0033.p (226 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_945401.1| putative NADH dehydrogenase (ubiquinone) 1 alph... 265 4e-69 ref|YP_001989084.1| NADH dehydrogenase (ubiquinone) [Rhodopseudo... 265 5e-69 ref|YP_004106423.1| NAD-dependent epimerase/dehydratase [Rhodops... 260 9e-68 ref|YP_484282.1| dehydrogenase [Rhodopseudomonas palustris HaA2]... 259 3e-67 ref|YP_567314.1| 3-beta hydroxysteroid dehydrogenase/isomerase [... 254 7e-66 >ref|NP_945401.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [Rhodopseudomonas palustris CGA009] emb|CAE25489.1| putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [Rhodopseudomonas palustris CGA009] Length = 321 Score = 265 bits (677), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 142/184 (77%), Positives = 158/184 (85%), Gaps = 5/184 (2%) Query: 1 MASNLDTLVTVFGGSGFLGRNVVRALCKRDYRVRVAVRRPELAGHLQ----XGQIHAVQA 56 M SN+DTLVTVFGGSGFLGR+VV AL +RDYR+RVAVRRPELAGHLQ GQIHAVQA Sbjct: 1 MTSNIDTLVTVFGGSGFLGRHVVSALARRDYRIRVAVRRPELAGHLQPLGRVGQIHAVQA 60 Query: 57 NVRYPASVEAAMRDSHIAINLVGILAEGGGQSFDAVQVKGAETIAKAAAAAGGRRMVHVS 116 N+RYP SV AAMR SH+AINLVGILAEGG Q FDAVQ GA T+A+AAA+ G R MVHVS Sbjct: 61 NLRYPESVAAAMRGSHVAINLVGILAEGGAQKFDAVQGSGAATVAQAAASVGAR-MVHVS 119 Query: 117 AIGADADSPSSYFRAKAEGEAAVLAALPQATIMRPSLLFGPEDQFTNRFAALARMSPVLP 176 AIGADA+SP+ Y R+KA GE AVLAA+PQATI RPS++FGPEDQFTNRFA LARMSPVLP Sbjct: 120 AIGADANSPARYARSKAAGEQAVLAAVPQATIFRPSVVFGPEDQFTNRFAMLARMSPVLP 179 Query: 177 LVAS 180 LV + Sbjct: 180 LVGA 183 >ref|YP_001989084.1| NADH dehydrogenase (ubiquinone) [Rhodopseudomonas palustris TIE-1] gb|ACE98608.1| NADH dehydrogenase (ubiquinone) [Rhodopseudomonas palustris TIE-1] Length = 321 Score = 265 bits (676), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 141/184 (76%), Positives = 158/184 (85%), Gaps = 5/184 (2%) Query: 1 MASNLDTLVTVFGGSGFLGRNVVRALCKRDYRVRVAVRRPELAGHLQ----XGQIHAVQA 56 M SN+DTLVTVFGGSGFLGR+VV AL +RDYR+RVAVRRPELAGHLQ GQIHAVQA Sbjct: 1 MTSNIDTLVTVFGGSGFLGRHVVSALARRDYRIRVAVRRPELAGHLQPLGRVGQIHAVQA 60 Query: 57 NVRYPASVEAAMRDSHIAINLVGILAEGGGQSFDAVQVKGAETIAKAAAAAGGRRMVHVS 116 N+RYP SV AAMR SH+AINLVGILAEGG Q FDAVQ GA T+A+AAA+ G R MVH+S Sbjct: 61 NLRYPESVAAAMRGSHVAINLVGILAEGGAQKFDAVQGSGAATVAQAAASVGAR-MVHIS 119 Query: 117 AIGADADSPSSYFRAKAEGEAAVLAALPQATIMRPSLLFGPEDQFTNRFAALARMSPVLP 176 AIGADA+SP+ Y R+KA GE AVLAA+PQATI RPS++FGPEDQFTNRFA LARMSPVLP Sbjct: 120 AIGADANSPARYARSKAAGEQAVLAAVPQATIFRPSVVFGPEDQFTNRFAMLARMSPVLP 179 Query: 177 LVAS 180 LV + Sbjct: 180 LVGA 183 >ref|YP_004106423.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris DX-1] gb|ADU41690.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris DX-1] Length = 321 Score = 260 bits (665), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 139/184 (75%), Positives = 156/184 (84%), Gaps = 5/184 (2%) Query: 1 MASNLDTLVTVFGGSGFLGRNVVRALCKRDYRVRVAVRRPELAGHLQ----XGQIHAVQA 56 M SNLDTLVTVFGGSGFLGR++V AL +RDYR+RVAVRRPELAGHLQ GQIHAVQA Sbjct: 1 MTSNLDTLVTVFGGSGFLGRHIVSALARRDYRIRVAVRRPELAGHLQPLGRVGQIHAVQA 60 Query: 57 NVRYPASVEAAMRDSHIAINLVGILAEGGGQSFDAVQVKGAETIAKAAAAAGGRRMVHVS 116 N+RYP SV AAMR +H+AINLVGILAEGG Q FDAVQ GA ++A+AAA+ G R MVHVS Sbjct: 61 NLRYPESVAAAMRGAHVAINLVGILAEGGAQKFDAVQGNGAASVAQAAASVGAR-MVHVS 119 Query: 117 AIGADADSPSSYFRAKAEGEAAVLAALPQATIMRPSLLFGPEDQFTNRFAALARMSPVLP 176 AIGAD DSP+ Y R+KA GE AV A+PQATI RPS++FGPEDQFTNRFAALARMSPVLP Sbjct: 120 AIGADPDSPARYARSKAAGERAVHEAVPQATIFRPSVVFGPEDQFTNRFAALARMSPVLP 179 Query: 177 LVAS 180 LV + Sbjct: 180 LVGA 183 >ref|YP_484282.1| dehydrogenase [Rhodopseudomonas palustris HaA2] gb|ABD05371.1| dehydrogenase [Rhodopseudomonas palustris HaA2] Length = 321 Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 140/184 (76%), Positives = 160/184 (86%), Gaps = 5/184 (2%) Query: 1 MASNLDTLVTVFGGSGFLGRNVVRALCKRDYRVRVAVRRPELAGHLQ----XGQIHAVQA 56 M SN+DTLVTVFGGSGF+GR+VV AL +RDYR+RVAVRRPELAGHLQ GQIHAVQA Sbjct: 1 MTSNIDTLVTVFGGSGFIGRHVVSALARRDYRIRVAVRRPELAGHLQPLGRVGQIHAVQA 60 Query: 57 NVRYPASVEAAMRDSHIAINLVGILAEGGGQSFDAVQVKGAETIAKAAAAAGGRRMVHVS 116 N+RYPAS+EAAMR +H+AINLVGILAEGG Q FDAVQ +GA +IAKAAAA G RMVHVS Sbjct: 61 NLRYPASIEAAMRGAHVAINLVGILAEGGAQKFDAVQAEGAASIAKAAAAVG-ARMVHVS 119 Query: 117 AIGADADSPSSYFRAKAEGEAAVLAALPQATIMRPSLLFGPEDQFTNRFAALARMSPVLP 176 AIGADA SP+ Y R+KA GE AVLAA+P ATI+RPS++FGPEDQFTNRFA+LARM PV+P Sbjct: 120 AIGADAASPARYARSKAAGEQAVLAAVPTATILRPSVVFGPEDQFTNRFASLARMLPVVP 179 Query: 177 LVAS 180 LV + Sbjct: 180 LVGA 183 >ref|YP_567314.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodopseudomonas palustris BisB5] gb|ABE37413.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Rhodopseudomonas palustris BisB5] Length = 321 Score = 254 bits (649), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 139/184 (75%), Positives = 161/184 (87%), Gaps = 5/184 (2%) Query: 1 MASNLDTLVTVFGGSGFLGRNVVRALCKRDYRVRVAVRRPELAGHLQ----XGQIHAVQA 56 M +N+DTLVTVFGGSGF+GR+VV AL +RDYR+RVAVRRPELAGHLQ GQIHAVQA Sbjct: 1 MNTNIDTLVTVFGGSGFIGRHVVSALARRDYRIRVAVRRPELAGHLQPLGRVGQIHAVQA 60 Query: 57 NVRYPASVEAAMRDSHIAINLVGILAEGGGQSFDAVQVKGAETIAKAAAAAGGRRMVHVS 116 N+R+PASV AAMR +H+AINLVGILAEGG Q FDAVQ +GA IAKAAAA G RMVHVS Sbjct: 61 NLRHPASVAAAMRGAHVAINLVGILAEGGAQKFDAVQAEGAAAIAKAAAAVG-ARMVHVS 119 Query: 117 AIGADADSPSSYFRAKAEGEAAVLAALPQATIMRPSLLFGPEDQFTNRFAALARMSPVLP 176 AIGADA+SP+ Y R+KA GE AVL+A+PQATI+RPS++FGPEDQFTNRFAALAR+SPV+P Sbjct: 120 AIGADANSPAGYARSKAAGEQAVLSAVPQATILRPSVVFGPEDQFTNRFAALARISPVVP 179 Query: 177 LVAS 180 LV + Sbjct: 180 LVGA 183