BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0038.0027.p (409 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06186313.1| conserved hypothetical protein [Legionella lo... 481 e-133 ref|YP_582159.1| hypothetical protein Rmet_0004 [Cupriavidus met... 472 e-131 ref|YP_095265.1| hypothetical protein lpg1234 [Legionella pneumo... 468 e-130 ref|YP_001509600.1| hypothetical protein Franean1_5336 [Frankia ... 345 7e-93 ref|ZP_07311743.1| restriction endonuclease superfamily protein ... 337 2e-90 >ref|ZP_06186313.1| conserved hypothetical protein [Legionella longbeachae D-4968] gb|EEZ95935.1| conserved hypothetical protein [Legionella longbeachae D-4968] Length = 399 Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust. Identities = 227/392 (57%), Positives = 290/392 (73%), Gaps = 9/392 (2%) Query: 12 SADLIVDAVYEGSPGSQLSGEALSRLMPGIGNLGGFRAAGRGEDKKLVVLYTSGEDRDWP 71 +ADLIVDAVYEG S + +S+++ GIGN+GGFR AG+ KKL+VLYTS ED DWP Sbjct: 11 NADLIVDAVYEGGNSGNTSDDPISKIIKGIGNMGGFRLAGQEASKKLIVLYTSMEDGDWP 70 Query: 72 DRLDLNTGQFVYYGDNKTPGHELHDTAPGGNRILRRVFDLLHSDVSQRSRIPPFFVFQKY 131 D LD + GQF+YYGDNK PGH++HDT GN L+ +FD H++ R +PP F+F KY Sbjct: 71 DSLDTSKGQFIYYGDNKHPGHDIHDTPRKGNATLKMLFDSTHNEKDARRTVPPIFIFAKY 130 Query: 132 PTPVSGRSVQFKGLAAPGFSGLSATSDLVAVWKTTGGHRFQNYRAVFTVLDVPVVSRAW- 190 PT S RSVQFKG+A PG+ GLSAT DL+AVWKTT G RFQNYRA+FT+L++P+VSR W Sbjct: 131 PTARSSRSVQFKGVAVPGYPGLSATDDLIAVWKTTNGQRFQNYRAIFTILNIPMVSRKWI 190 Query: 191 ---LQDIAAGQALGPTTPTAWMDWVHSGAYRALASESTTVIRSQDQQLPDTPIKRELLGV 247 L + +L P + W SG L + ST IR+Q Q+P T ++RE+L V Sbjct: 191 NSLLDPLVQDNSLNP-----FYQWKISGKAEVLIAPSTKTIRTQIDQMPKTKLEREILQV 245 Query: 248 VYEHFKEAPIAFEAFAARIFQMHDQRVIIDEITRASVDGGRDAVGRYLLGLSDDPVYAEF 307 ++++F + PI FEA AA+IFQ++D+ +IDEITR++VDGGRDAVGRY+LG+ DDPVYAEF Sbjct: 246 LFDYFCKTPIKFEACAAKIFQLYDENALIDEITRSTVDGGRDAVGRYVLGIKDDPVYAEF 305 Query: 308 SLEAKCYRPASNGEGASTVGVREVSRLISRIKHRQFGVLVTTSIVGRQAYEEVREDKHPI 367 SLEAKCY+P NG+ ++VGV+EVSRLISRIK+RQFGVLVTTSI+ +QAYEEVRED HPI Sbjct: 306 SLEAKCYQPGLNGQNINSVGVKEVSRLISRIKNRQFGVLVTTSIIAKQAYEEVREDGHPI 365 Query: 368 IFFSGKDIADILTSNGFNTRELLSALLQREFP 399 +F SG DI+ IL G N+ + + A L EFP Sbjct: 366 VFLSGGDISRILIKKGINSTKAVLAWLNSEFP 397 >ref|YP_582159.1| hypothetical protein Rmet_0004 [Cupriavidus metallidurans CH34] gb|ABF06890.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 369 Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust. Identities = 223/355 (62%), Positives = 272/355 (76%), Gaps = 1/355 (0%) Query: 44 LGGFRAAGRGEDKKLVVLYTSGEDRDWPDRLDLNTGQFVYYGDNKTPGHELHDTAPGGNR 103 +GGFR GRGE K VVL+T+GED+DWPD LDL+TG+FVY+GDNKTPGHELH+T GGN+ Sbjct: 1 MGGFRVTGRGEQKSWVVLFTTGEDKDWPDTLDLSTGKFVYFGDNKTPGHELHETR-GGNK 59 Query: 104 ILRRVFDLLHSDVSQRSRIPPFFVFQKYPTPVSGRSVQFKGLAAPGFSGLSATSDLVAVW 163 +LR F+ LH+ V+ R+ + PF VF+KYP RSVQFKGLA PGF LS+T DLVAVW Sbjct: 60 VLRYSFERLHAAVNPRADVAPFLVFKKYPLAHGARSVQFKGLAVPGFPSLSSTEDLVAVW 119 Query: 164 KTTGGHRFQNYRAVFTVLDVPVVSRAWLQDIAAGQALGPTTPTAWMDWVHSGAYRALASE 223 K++ G RFQNYRAVFT+L+ PV+SRAW+ D+ AG P AW W SG Y LA+ Sbjct: 120 KSSEGQRFQNYRAVFTILNAPVLSRAWINDLKAGDLNSSNAPRAWRQWRESGKYSPLAAA 179 Query: 224 STTVIRSQDQQLPDTPIKRELLGVVYEHFKEAPIAFEAFAARIFQMHDQRVIIDEITRAS 283 TT IRS + Q PDT +KRELL +++H+K APIAFEAFAAR+FQM D+RV+IDEITR Sbjct: 180 PTTNIRSANAQSPDTALKRELLECIWQHYKGAPIAFEAFAARVFQMTDERVVIDEITRGV 239 Query: 284 VDGGRDAVGRYLLGLSDDPVYAEFSLEAKCYRPASNGEGASTVGVREVSRLISRIKHRQF 343 VDGGRDA+GRY LG DPVYAEFSLEAKCYRP NG+ TV V +V+RLISRI+HRQF Sbjct: 240 VDGGRDAIGRYRLGSMADPVYAEFSLEAKCYRPPLNGDTPITVSVSDVARLISRIRHRQF 299 Query: 344 GVLVTTSIVGRQAYEEVREDKHPIIFFSGKDIADILTSNGFNTRELLSALLQREF 398 GVLVTTS++ QAY+EVRED+HPI+F SG D+ +IL G+NTR + LL +F Sbjct: 300 GVLVTTSVIASQAYKEVREDRHPIVFISGGDMVNILIDKGYNTRGRVQELLSSDF 354 >ref|YP_095265.1| hypothetical protein lpg1234 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gb|AAU27318.1| hypothetical protein lpg1234 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 399 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 221/400 (55%), Positives = 292/400 (73%), Gaps = 9/400 (2%) Query: 3 KVVLHQDCPSADLIVDAVYEGSPGSQLSGEALSRLMPGIGNLGGFRAAGRGEDKKLVVLY 62 K+ +ADLI+DAVYEG S + +S+++ GIGN+GGFR+AG+G KKL+VLY Sbjct: 2 KIYSFDTLANADLIIDAVYEGGSSGNASDDPISKIIKGIGNMGGFRSAGQGIFKKLIVLY 61 Query: 63 TSGEDRDWPDRLDLNTGQFVYYGDNKTPGHELHDTAPGGNRILRRVFDLLHSDVSQRSRI 122 T+ ED DWPD +D + GQF+YYGDNK PGH++HDT GN L+ +FD H++ R + Sbjct: 62 TNMEDGDWPDSIDTSKGQFIYYGDNKHPGHDIHDTPRQGNATLKMLFDSTHNEKDARRIV 121 Query: 123 PPFFVFQKYPTPVSGRSVQFKGLAAPGFSGLSATSDLVAVWKTTGGHRFQNYRAVFTVLD 182 PP F+F KYPT S RSVQFKG+A PG+ GLSAT DL+AVWKTT G RFQNYRA+FT+L+ Sbjct: 122 PPIFIFVKYPTASSSRSVQFKGVAVPGYPGLSATDDLIAVWKTTNGQRFQNYRAIFTILN 181 Query: 183 VPVVSRAWLQDI----AAGQALGPTTPTAWMDWVHSGAYRALASESTTVIRSQDQQLPDT 238 +P+VSR W+ + +L P + W SG L + ST IR+Q +Q+P T Sbjct: 182 IPMVSRKWINSLFDPFGQDNSLNP-----FYQWKISGKADVLIAPSTKTIRTQIEQMPRT 236 Query: 239 PIKRELLGVVYEHFKEAPIAFEAFAARIFQMHDQRVIIDEITRASVDGGRDAVGRYLLGL 298 ++RE+L V+++F EAPI FEA AA+IFQ++D+ V+IDEITR++VDGG+DA+GRY+LG+ Sbjct: 237 KLEREILQAVFDYFCEAPIKFEACAAKIFQLYDENVLIDEITRSAVDGGKDAIGRYVLGI 296 Query: 299 SDDPVYAEFSLEAKCYRPASNGEGASTVGVREVSRLISRIKHRQFGVLVTTSIVGRQAYE 358 +DPVYAEF LEAKCY+P NG+ ++VGV+EVSRLISRIK+RQFGVLVTTS + +QAY Sbjct: 297 KEDPVYAEFFLEAKCYQPGLNGQNINSVGVKEVSRLISRIKNRQFGVLVTTSFIAKQAYG 356 Query: 359 EVREDKHPIIFFSGKDIADILTSNGFNTRELLSALLQREF 398 EVRED HPI+F SG DI+ IL G N+ + + A L EF Sbjct: 357 EVREDGHPIVFLSGGDISRILIKKGINSTDAVLAWLNSEF 396 >ref|YP_001509600.1| hypothetical protein Franean1_5336 [Frankia sp. EAN1pec] gb|ABW14694.1| conserved hypothetical protein [Frankia sp. EAN1pec] Length = 450 Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 182/398 (45%), Positives = 248/398 (62%), Gaps = 13/398 (3%) Query: 2 AKVVLHQDCPSADLIVDAVYEGSPGSQLSGEALSRLMPGIGNLGGFRAAG--RGEDKKLV 59 ++VV D P+A L+VD +YEG L+ + L+RL+P +GN GGFR AG R +L Sbjct: 49 SQVVPFVDLPTAALVVDQLYEGGTAGTLADDPLARLLP-VGNQGGFRYAGSPRKGTVRLS 107 Query: 60 VLYTSGEDRDWPDRLDLNTGQFVYYGDNKTPGHELHDTAPGGNRILRRVFDLLHSDVSQR 119 VLYT+G DWPD LD +TG F YYGDN+ PG +LHDT GN +LR VF+ H V +R Sbjct: 108 VLYTTGAVADWPDTLDPSTGVFTYYGDNRKPGRDLHDTQRSGNLLLRDVFEHAHGSVEER 167 Query: 120 SRIPPFFVFQKYPTPVSGRSVQFKGLAAPGFSGLSATSDLVAVWKTTGGHRFQNYRAVFT 179 +PPF +F+ P GR + F+GL APG + L++ DLVA+W+ T GHRFQNYRA FT Sbjct: 168 RTVPPFLLFETAP---PGRRIMFRGLLAPGAATLTSDDDLVAIWRNTRGHRFQNYRAHFT 224 Query: 180 VLDVPVVSRAWLQDIAAGQALGPT-TPTAWMDWVHSGAYRALASESTTVIRSQDQQLPDT 238 VLDV V+R WL DI AG A P AW WV AY L + STT+IR++ +Q P Sbjct: 225 VLDVATVTRTWLTDILAGHATDSEHCPPAWTAWVDGRAYSPLIAPSTTIIRTKAEQQPPD 284 Query: 239 PIKRELLGVVYEHFKEAPIAFEAFAARIFQMHDQRVIIDEITRASVDGGRDAVGRYLLGL 298 P +L + EH++ FE A ++++ ++T S DGGRDA+G Y+LG Sbjct: 285 PTGVAILAAIREHYRGHEHDFEFCAVELWRLIAPATGRCDVTPPSRDGGRDAIGDYILGP 344 Query: 299 SDDPVYAEFSLEAKCYRPASNGEGASTVGVREVSRLISRIKHRQFGVLVTTSIVGRQAYE 358 DP+ +F+LEAKCY ++VGVR+V+RLISR++HR FGV +TTS +Q Y Sbjct: 345 LSDPIAIDFALEAKCY------TDTNSVGVRDVARLISRLRHRHFGVFITTSHFNQQVYT 398 Query: 359 EVREDKHPIIFFSGKDIADILTSNGFNTRELLSALLQR 396 EVR D+HPI SG+DI + L ++G+ ++A L + Sbjct: 399 EVRTDRHPIALVSGRDIVNALRAHGYADVNAVNAWLGK 436 >ref|ZP_07311743.1| restriction endonuclease superfamily protein [Streptomyces griseoflavus Tu4000] gb|EFL40112.1| restriction endonuclease superfamily protein [Streptomyces griseoflavus Tu4000] Length = 402 Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 180/398 (45%), Positives = 243/398 (61%), Gaps = 11/398 (2%) Query: 5 VLHQDCPSADLIVDAVYEGSPGSQLSGEALSRLMPGIGNLGGFRAAGRGE--DKKLVVLY 62 V + + DL+VDAVY G + +S+++ GIGN GGFR AG KL VLY Sbjct: 11 VTFAELTTTDLVVDAVYAGGSSGHTGDDPMSKIIKGIGNQGGFRYAGSPALGTVKLAVLY 70 Query: 63 TSGEDRDWPDRLDLNTGQFVYYGDNKTPGHELHDTAPGGNRILRRVFDLLHSDVSQRSRI 122 TSG + DWPD LD+ TG F YYGDN+ PG LH+T GN +LR F H + RS++ Sbjct: 71 TSGGEVDWPDYLDVETGTFTYYGDNRRPGQSLHETPRSGNILLRDAFAASHGTPADRSKV 130 Query: 123 PPFFVFQKYPTPVSGRSVQFKGLAAPGFSGLSATSDLVAVWKTTGGHRFQNYRAVFTVLD 182 PPFF+F+K GRSV F+GL APG L++ +L A+W+ T G RFQNYRA FTVL+ Sbjct: 131 PPFFLFEK--AAARGRSVLFRGLLAPGGPNLTSDDELAAIWRATDGRRFQNYRARFTVLE 188 Query: 183 VPVVSRAWLQD-IAAGQALGPTTPTAWMDWVHSGAYRALASESTTVIRSQDQQLPDTPIK 241 V V RAW+Q + G L P AW W S YR L + STTV+RS+ QLP + Sbjct: 189 VDRVPRAWIQHLLNGGDPLDGECPDAWRTWTESRVYRPLLAPSTTVVRSKADQLPGDAVG 248 Query: 242 RELLGVVYEHFKEAPIAFEAFAARIFQMHDQRVIIDEITRASVDGGRDAVGRYLLGLSDD 301 + +L + ++F+ FE A I+++ ++TR S DGGRDAVG YLLG + + Sbjct: 249 KAMLQEIRDYFRGREHDFELCAVAIWRLMAPSTGAVDVTRPSRDGGRDAVGTYLLGPAAN 308 Query: 302 PVYAEFSLEAKCYRPASNGEGASTVGVREVSRLISRIKHRQFGVLVTTSIVGRQAYEEVR 361 + +F+LEAKCY P ++VGVREVSRLISR++HR FGVLVTTS + +Q +E++ Sbjct: 309 RIAVDFALEAKCYGP------DNSVGVREVSRLISRLRHRNFGVLVTTSFLNKQVQDEIQ 362 Query: 362 EDKHPIIFFSGKDIADILTSNGFNTRELLSALLQREFP 399 ED HPI G+DI ++L +G T + + L + FP Sbjct: 363 EDGHPIALVCGRDIVEVLRQHGRTTADSVRQWLTQSFP 400