BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0001.p         (164 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q45220.1|ISPA_BRAJA RecName: Full=Probable farnesyl diphospha...   300   5e-80
ref|NP_768788.1| farnesyl diphosphate synthase [Bradyrhizobium j...   300   5e-80
ref|NP_443950.1| geranyltransferase [Sinorhizobium fredii NGR234...   291   3e-77
emb|CAD31472.1| PROBABLE FARNESYL-DIPHOSPHATE SYNTHASE PROTEIN [...   276   6e-73
ref|NP_106892.1| geranyltranstransferase [Mesorhizobium loti MAF...   275   1e-72

>sp|Q45220.1|ISPA_BRAJA RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP
           synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Geranyltranstransferase
 gb|AAC28894.1| putative dimethylallyltranstransferase; ORF6; similar to E. coli
           dimethylallyltranstransferase, Swiss-Prot Accession
           Number P22939 (Fujisaki et al., J. Biochem.
           108:995-1000(1990) [Bradyrhizobium japonicum USDA 110]
          Length = 332

 Score =  300 bits (768), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 150/164 (91%), Positives = 155/164 (94%)

Query: 1   VRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVTMHRMKSGALVRASVRMGALCAVADD 60
           VRELAQAVSAEGAAGGQA+DLSLVGKHVELDRIV MHRMKSGALVRASVRMGALCAV  +
Sbjct: 169 VRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKSGALVRASVRMGALCAVGVN 228

Query: 61  AAHAALYCALDHYSACFGLALQVIDDILDVTADTAALGKTPGKDEAAQKPTCASFMGLQA 120
           AAHAALYCALDHYSACFGLALQVIDDILDVTADTAALGKTPGKD AAQKPTCAS MGLQ 
Sbjct: 229 AAHAALYCALDHYSACFGLALQVIDDILDVTADTAALGKTPGKDAAAQKPTCASIMGLQE 288

Query: 121 ARQFALDLLRDSGEAIAPLGPRTERLAQILQRTNAYLFKHAPSA 164
           ARQFALDLLRD+GEAIAPLGPR ERLAQ++QR NAYLFKHAP A
Sbjct: 289 ARQFALDLLRDAGEAIAPLGPRAERLAQLIQRANAYLFKHAPRA 332


>ref|NP_768788.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47413.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110]
          Length = 335

 Score =  300 bits (768), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 150/164 (91%), Positives = 155/164 (94%)

Query: 1   VRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVTMHRMKSGALVRASVRMGALCAVADD 60
           VRELAQAVSAEGAAGGQA+DLSLVGKHVELDRIV MHRMKSGALVRASVRMGALCAV  +
Sbjct: 172 VRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKSGALVRASVRMGALCAVGVN 231

Query: 61  AAHAALYCALDHYSACFGLALQVIDDILDVTADTAALGKTPGKDEAAQKPTCASFMGLQA 120
           AAHAALYCALDHYSACFGLALQVIDDILDVTADTAALGKTPGKD AAQKPTCAS MGLQ 
Sbjct: 232 AAHAALYCALDHYSACFGLALQVIDDILDVTADTAALGKTPGKDAAAQKPTCASIMGLQE 291

Query: 121 ARQFALDLLRDSGEAIAPLGPRTERLAQILQRTNAYLFKHAPSA 164
           ARQFALDLLRD+GEAIAPLGPR ERLAQ++QR NAYLFKHAP A
Sbjct: 292 ARQFALDLLRDAGEAIAPLGPRAERLAQLIQRANAYLFKHAPRA 335


>ref|NP_443950.1| geranyltransferase [Sinorhizobium fredii NGR234]
 sp|P55539.1|ISPA_RHISN RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP
           synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Geranyltranstransferase
 gb|AAB91752.1| probsble geranyltransferase protein IspA [Sinorhizobium fredii
           NGR234]
          Length = 332

 Score =  291 bits (744), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 146/164 (89%), Positives = 153/164 (93%)

Query: 1   VRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVTMHRMKSGALVRASVRMGALCAVADD 60
           VRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIV MHRMK GALVRASVRMGALCA+A+D
Sbjct: 169 VRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVAMHRMKCGALVRASVRMGALCAIAED 228

Query: 61  AAHAALYCALDHYSACFGLALQVIDDILDVTADTAALGKTPGKDEAAQKPTCASFMGLQA 120
           AA A LYCALDHYSACFGLALQV+DDILD TADTA LGKTPGKD AAQKPTCAS MGLQA
Sbjct: 229 AADATLYCALDHYSACFGLALQVVDDILDATADTATLGKTPGKDAAAQKPTCASIMGLQA 288

Query: 121 ARQFALDLLRDSGEAIAPLGPRTERLAQILQRTNAYLFKHAPSA 164
           ARQFALDLL ++GEAIAPLGPR ERLAQ+LQR +AYLFKHAPSA
Sbjct: 289 ARQFALDLLCEAGEAIAPLGPRAERLAQMLQRASAYLFKHAPSA 332


>emb|CAD31472.1| PROBABLE FARNESYL-DIPHOSPHATE SYNTHASE PROTEIN [Mesorhizobium loti
           R7A]
          Length = 324

 Score =  276 bits (707), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 148/164 (90%), Positives = 153/164 (93%)

Query: 1   VRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVTMHRMKSGALVRASVRMGALCAVADD 60
           VRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIV MHRMKSGALVRASVRMGALCA+A+D
Sbjct: 161 VRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVAMHRMKSGALVRASVRMGALCAIAED 220

Query: 61  AAHAALYCALDHYSACFGLALQVIDDILDVTADTAALGKTPGKDEAAQKPTCASFMGLQA 120
           AAHAALYCALD YSACFGLALQV+DDILD TADTA LGKTPGKD AAQKPTCAS MGLQA
Sbjct: 221 AAHAALYCALDRYSACFGLALQVVDDILDATADTATLGKTPGKDAAAQKPTCASIMGLQA 280

Query: 121 ARQFALDLLRDSGEAIAPLGPRTERLAQILQRTNAYLFKHAPSA 164
           ARQ ALDLLRD+GEAIAPLG R ERLAQ+LQR NAYLFKHAP A
Sbjct: 281 ARQLALDLLRDAGEAIAPLGTRAERLAQMLQRANAYLFKHAPCA 324


>ref|NP_106892.1| geranyltranstransferase [Mesorhizobium loti MAFF303099]
 dbj|BAB52678.1| geranyltranstransferase [Mesorhizobium loti MAFF303099]
          Length = 321

 Score =  275 bits (704), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 147/164 (89%), Positives = 152/164 (92%)

Query: 1   VRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVTMHRMKSGALVRASVRMGALCAVADD 60
           VRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIV MHRMKSGALVRASVRMGALCA+A+D
Sbjct: 158 VRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVAMHRMKSGALVRASVRMGALCAIAED 217

Query: 61  AAHAALYCALDHYSACFGLALQVIDDILDVTADTAALGKTPGKDEAAQKPTCASFMGLQA 120
           AAHAALYCALD YSACFGLALQV+DDILD TADTA LGKTPGKD AAQKPTCAS MGLQA
Sbjct: 218 AAHAALYCALDRYSACFGLALQVVDDILDATADTATLGKTPGKDAAAQKPTCASIMGLQA 277

Query: 121 ARQFALDLLRDSGEAIAPLGPRTERLAQILQRTNAYLFKHAPSA 164
           ARQ ALDLLRD+GEAI PLG R ERLAQ+LQR NAYLFKHAP A
Sbjct: 278 ARQLALDLLRDAGEAIPPLGTRAERLAQMLQRANAYLFKHAPCA 321