BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0007.p         (58 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_444043.1| DNA integration/recombination/inversion protein...   103   9e-21
ref|YP_001314957.1| phage integrase family protein [Sinorhizobiu...   101   4e-20

>ref|NP_444043.1| DNA integration/recombination/inversion protein [Sinorhizobium
           fredii NGR234]
 sp|P55638.1|Y4RE_RHISN RecName: Full=Putative integrase/recombinase y4rE
 gb|AAB92471.1| DNA integration/recombination/inversion protein [Sinorhizobium
           fredii NGR234]
          Length = 310

 Score =  103 bits (257), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 49/56 (87%), Positives = 51/56 (91%)

Query: 1   MALDFVLSFGGAADSRAVRHGVLRRFYEYLVVYDPQTEVLERRAFPWSRAIPPPRI 56
           MALDFVLSFGGAA+SRA RHGVLRRFYEYL VYD QTE L+RRAFP SRAIPPPRI
Sbjct: 53  MALDFVLSFGGAANSRATRHGVLRRFYEYLAVYDAQTEALKRRAFPRSRAIPPPRI 108


>ref|YP_001314957.1| phage integrase family protein [Sinorhizobium medicae WSM419]
 gb|ABR65024.1| phage integrase family protein [Sinorhizobium medicae WSM419]
          Length = 310

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 48/56 (85%), Positives = 49/56 (87%)

Query: 1   MALDFVLSFGGAADSRAVRHGVLRRFYEYLVVYDPQTEVLERRAFPWSRAIPPPRI 56
           MALDFVLSFGGAA+SRA RHGVL RFYEYL VYD QTE LERR FP SRAIPPPRI
Sbjct: 53  MALDFVLSFGGAANSRATRHGVLSRFYEYLAVYDAQTETLERRVFPRSRAIPPPRI 108