BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0003.p (221 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001243449.1| hypothetical protein BBta_7701 [Bradyrhizobi... 293 1e-77 ref|ZP_01058138.1| hypothetical protein MED193_00440 [Roseobacte... 266 2e-69 ref|ZP_05063257.1| conserved hypothetical protein [Octadecabacte... 260 8e-68 ref|ZP_02155000.1| hypothetical protein OIHEL45_17381 [Oceanibul... 250 1e-64 ref|YP_004687573.1| hypothetical protein CNE_BB1p01080 [Cupriavi... 241 7e-62 >ref|YP_001243449.1| hypothetical protein BBta_7701 [Bradyrhizobium sp. BTAi1] gb|ABQ39543.1| hypothetical protein BBta_7701 [Bradyrhizobium sp. BTAi1] Length = 195 Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 143/188 (76%), Positives = 163/188 (86%) Query: 24 VWTPGDFADLGSRAAVDKTLQRLVAAGELRRIDRGLYDRPRKSNLTGKPMVPDYRAVIRA 83 +WTP DFADL R AVDK+LQRL AAGELRRIDRGLYDRP ++LTG+P VPDYRAVIRA Sbjct: 1 MWTPSDFADLAGRGAVDKSLQRLAAAGELRRIDRGLYDRPSVNSLTGRPTVPDYRAVIRA 60 Query: 84 VARRDQARVVVDGMTAANDLGLTTAVPARIEVLVDARLKPIKLGKQVINFKSAAPSRLYW 143 VARRD+AR VVDGMTAANDLGLTTAVPARIEVLVDARLKPIKLG Q I+FK+AA SRLYW Sbjct: 61 VARRDKARFVVDGMTAANDLGLTTAVPARIEVLVDARLKPIKLGNQEIHFKAAAASRLYW 120 Query: 144 AGRPGMRVVQALYWMQDMMAGKDDRQAVENVLSKLFANPQHGKEIRDDLRAGLSAMPIWM 203 AGRP MRVVQAL+W+QD++ D+R V +L +L A+P HG+ IRDDLR GLSA+PIWM Sbjct: 121 AGRPAMRVVQALHWLQDVLNENDERARVTEILRRLLADPDHGQGIRDDLREGLSALPIWM 180 Query: 204 QDFLRPLL 211 Q+FLRPL+ Sbjct: 181 QEFLRPLI 188 >ref|ZP_01058138.1| hypothetical protein MED193_00440 [Roseobacter sp. MED193] gb|EAQ43960.1| hypothetical protein MED193_00440 [Roseobacter sp. MED193] Length = 220 Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 139/216 (64%), Positives = 167/216 (77%), Gaps = 5/216 (2%) Query: 4 QPTTDLRPRLIARIDATPTEVWTPGDFADLGSRAAVDKTLQRLVAAGELRRIDRGLYDRP 63 QP T L L ARI+ P +VWTP DFAD+G+RAAVDK LQR+VA+G+LRRI+RGLYD+P Sbjct: 6 QPKT-LPDLLRARINDAPRQVWTPADFADIGARAAVDKALQRMVASGQLRRIERGLYDKP 64 Query: 64 RKSNLTGKPMVPDYRAVIRAVARRDQARVVVDGMTAANDLGLTTAVPARIEVLVDARLKP 123 ++ LTGK VPDYRAVI A+ARRDQ R ++DGMTAAN LGLT AVPA+IEVLVDARLKP Sbjct: 65 AQNALTGKSTVPDYRAVIDAIARRDQVRWLIDGMTAANTLGLTNAVPAKIEVLVDARLKP 124 Query: 124 IKLGKQVINFKSAAPSRLYWAGRPGMRVVQALYWMQDMMAGKDDRQAVENVLSKLFANPQ 183 + LG Q I FK AAPSRLYWAGRPGM +VQAL+W+ D+M+ + V + +L A+ + Sbjct: 125 VTLGNQKIVFKHAAPSRLYWAGRPGMYLVQALHWLHDVMSNDVEGAVVRKTVRRLLADKK 184 Query: 184 HGKEIRDDLRAGLSAMPIWMQDFLR-PLLEPDDAAE 218 G + DDL+AGLSAMPIWMQD LR PL DAAE Sbjct: 185 SGSGLADDLKAGLSAMPIWMQDILRAPLF---DAAE 217 >ref|ZP_05063257.1| conserved hypothetical protein [Octadecabacter antarcticus 238] gb|EDY88496.1| conserved hypothetical protein [Octadecabacter antarcticus 238] Length = 221 Score = 260 bits (665), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 131/214 (61%), Positives = 161/214 (75%), Gaps = 2/214 (0%) Query: 1 MLDQPTTDLRP-RLIARIDATPTEVWTPGDFADLGSRAAVDKTLQRLVAAGELRRIDRGL 59 M D T P RL ARI+ P +VWTP DFAD+G R A+DK LQR+V +G+LRRI+RG Sbjct: 1 MTDAAQTKTLPDRLRARINDAPRQVWTPADFADIGGRDAIDKALQRMVTSGQLRRIERGF 60 Query: 60 YDRPRKSNLTGKPMVPDYRAVIRAVARRDQARVVVDGMTAANDLGLTTAVPARIEVLVDA 119 YD+P ++ LTGK VPDYR+VI A+ARRDQ R ++DGMTAAN LGLT AVPA+IEVLVDA Sbjct: 61 YDKPVQNALTGKSTVPDYRSVIDAIARRDQVRWLIDGMTAANTLGLTNAVPAKIEVLVDA 120 Query: 120 RLKPIKLGKQVINFKSAAPSRLYWAGRPGMRVVQALYWMQDMMAGKDDRQAVENVLSKLF 179 RLKP+ LG Q I FK AAPSRLYWAGRPGM +VQAL+W+ D+M+ + AV + ++ Sbjct: 121 RLKPVTLGNQKIVFKHAAPSRLYWAGRPGMYLVQALHWLHDVMSNDVESDAVRKTVRRML 180 Query: 180 ANPQHGKEIRDDLRAGLSAMPIWMQDFLR-PLLE 212 A+ + G + DL+AGLSAMPIWMQD LR PL E Sbjct: 181 ADKKTGPRLASDLKAGLSAMPIWMQDILRQPLFE 214 >ref|ZP_02155000.1| hypothetical protein OIHEL45_17381 [Oceanibulbus indolifex HEL-45] gb|EDQ03496.1| hypothetical protein OIHEL45_17381 [Oceanibulbus indolifex HEL-45] Length = 197 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 119/188 (63%), Positives = 150/188 (79%) Query: 24 VWTPGDFADLGSRAAVDKTLQRLVAAGELRRIDRGLYDRPRKSNLTGKPMVPDYRAVIRA 83 +WTP DFAD+G RAAVDK LQR+V +G+LRRI RGLYD+P ++ LTGK VPDYRAVI A Sbjct: 1 MWTPADFADIGGRAAVDKALQRMVTSGQLRRIQRGLYDKPSQNALTGKSTVPDYRAVIDA 60 Query: 84 VARRDQARVVVDGMTAANDLGLTTAVPARIEVLVDARLKPIKLGKQVINFKSAAPSRLYW 143 +ARRDQ R ++DGMTAAN LGLT AVPA+IEVLVDARLKP+ L Q I FK AAPSRLYW Sbjct: 61 IARRDQVRWLIDGMTAANTLGLTNAVPAKIEVLVDARLKPVTLDNQKIVFKQAAPSRLYW 120 Query: 144 AGRPGMRVVQALYWMQDMMAGKDDRQAVENVLSKLFANPQHGKEIRDDLRAGLSAMPIWM 203 AGRPGM +VQAL+W+ D+M+ +++ AV++ + +L A+ + G + DDL++G +A PIWM Sbjct: 121 AGRPGMYLVQALHWLHDVMSSDEEQAAVQSAVRRLLASHETGPALLDDLKSGFAATPIWM 180 Query: 204 QDFLRPLL 211 QD LR L Sbjct: 181 QDILRGHL 188 >ref|YP_004687573.1| hypothetical protein CNE_BB1p01080 [Cupriavidus necator N-1] gb|AEI81535.1| hypothetical protein CNE_BB1p01080 [Cupriavidus necator N-1] Length = 228 Score = 241 bits (614), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 119/209 (56%), Positives = 153/209 (73%), Gaps = 3/209 (1%) Query: 7 TDLRPRLIARID-ATPTEVWTPGDFADLGSRAAVDKTLQRLVAAGELRRIDRGLYDRPRK 65 +DLR + A I+ A+P +VW P DFA LGSR A+DKTLQR V AG+LRRIDRGLYD P+ Sbjct: 2 SDLRENISALIEQASPGKVWVPTDFAHLGSRDAIDKTLQRFVRAGQLRRIDRGLYDLPKL 61 Query: 66 SNLTGKPMVPDYRAVIRAVARRDQARVVVDGMTAANDLGLTTAVPARIEVLVDARLKPIK 125 + LTG+P +PDYRAV+ A+ARRD R++VDGMTAANDLGLT AV AR+ + D+R + +K Sbjct: 62 NRLTGRPTMPDYRAVVEAIARRDNLRLLVDGMTAANDLGLTDAVSARVTIHTDSRRRSLK 121 Query: 126 LGKQVINFKSAAPSRLYWAGRPGMRVVQALYWMQDMMAGKDDRQAVENVLSKLFANPQHG 185 L I FK APSRLYWAGRP MRVVQAL+W++D +A +R A L + +P HG Sbjct: 122 LDNLTIVFKQTAPSRLYWAGRPAMRVVQALHWLKDTLASDSERIAA--ALRNVLEHPDHG 179 Query: 186 KEIRDDLRAGLSAMPIWMQDFLRPLLEPD 214 + IR+DL +G AMP WM+ F+R LL+ + Sbjct: 180 QSIREDLMSGFGAMPAWMRTFVRDLLDCN 208