BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0024.p (357 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_569319.1| putative taurine transport system protein [Rhod... 576 e-162 ref|YP_534377.1| NLPA lipoprotein [Rhodopseudomonas palustris Bi... 575 e-162 ref|YP_001990597.1| urea ABC transporter periplasmic protein [Rh... 575 e-162 ref|NP_946760.1| taurine transport system protein [Rhodopseudomo... 573 e-161 ref|YP_004107491.1| ABC transporter periplasmic-binding protein ... 569 e-160 >ref|YP_569319.1| putative taurine transport system protein [Rhodopseudomonas palustris BisB5] gb|ABE39418.1| putative taurine transport system protein [Rhodopseudomonas palustris BisB5] Length = 356 Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust. Identities = 300/351 (85%), Positives = 320/351 (91%) Query: 7 FLRSVVIGCAVVLAAAPAADAAPKKSFKVAWSIYVGWMPWGYAADTGIVKKWADKYGIAI 66 + S++I ++V +A A AAPKK FKVAWSIYVGWMPWGYAADTGIVKKWADKYGI I Sbjct: 6 LIYSLIIAGSIVALSAAGASAAPKKDFKVAWSIYVGWMPWGYAADTGIVKKWADKYGITI 65 Query: 67 EVKQFNDYVESINQYTAGGYDAVTITNMDALSIPAAGGVDTTAVVMGDFSNGNDAVILKN 126 EVKQFNDYVESINQYTAG YDAVTITNMDALSIPAAGGVDTTAVVMGDFSNGNDAVILK Sbjct: 66 EVKQFNDYVESINQYTAGAYDAVTITNMDALSIPAAGGVDTTAVVMGDFSNGNDAVILKG 125 Query: 127 KADLAAIKGQTVNLVEFSVSHYLLARALETSKLSEKDVKVVNTSDADIAAAYKTPDVSAV 186 KADLAAIKGQ VNLVEFSVSHYLLARALE+ +LSEKD+KVVNTSDAD+AAAYKT DV+AV Sbjct: 126 KADLAAIKGQKVNLVEFSVSHYLLARALESKQLSEKDIKVVNTSDADLAAAYKTADVTAV 185 Query: 187 VTWNPIVTEILGSPDAKKVFDSSQIPGEIMDLMVVNTAVAKDNPDFAKALVGIWYETLSK 246 VTWNPIV+EIL +PDAKK FDSSQIPGEIMDLMV N+AV KDNPDFAKALVGIWYET++K Sbjct: 186 VTWNPIVSEILSAPDAKKAFDSSQIPGEIMDLMVANSAVVKDNPDFAKALVGIWYETIAK 245 Query: 247 MTANDAAAKAAKEAMAKASGTDLAGFDSQLSTTKLFDKAIDAEAFTRSQTVGATMDRVRK 306 M A KAAKEAMAKASGTDLAGFDSQL++TKLFDKA +AEAFTRS TVG TMDRVRK Sbjct: 246 MNATGDEGKAAKEAMAKASGTDLAGFDSQLASTKLFDKAAEAEAFTRSATVGTTMDRVRK 305 Query: 307 FLFEKDLLGKGAKSADAVGIELADKSVLGDKSNVKLRFDPTYMDEAAKGKL 357 FLFEKDLLGKGAKSADAVGIELADK+VLGDKSNVKLRFD TYMD AAKGKL Sbjct: 306 FLFEKDLLGKGAKSADAVGIELADKTVLGDKSNVKLRFDATYMDAAAKGKL 356 >ref|YP_534377.1| NLPA lipoprotein [Rhodopseudomonas palustris BisB18] gb|ABD90058.1| NLPA lipoprotein [Rhodopseudomonas palustris BisB18] Length = 373 Score = 575 bits (1482), Expect = e-162, Method: Compositional matrix adjust. Identities = 301/357 (84%), Positives = 325/357 (91%) Query: 1 MNKFVFFLRSVVIGCAVVLAAAPAADAAPKKSFKVAWSIYVGWMPWGYAADTGIVKKWAD 60 MNK LR++ + A++ A +ADAAPKK FKVAWSIYVGWMPWGYAADTGIVKKWAD Sbjct: 17 MNKLSSILRNMALASAMIAVAVSSADAAPKKDFKVAWSIYVGWMPWGYAADTGIVKKWAD 76 Query: 61 KYGIAIEVKQFNDYVESINQYTAGGYDAVTITNMDALSIPAAGGVDTTAVVMGDFSNGND 120 KYGI IEVKQFNDYVESINQYTAG YDAVTITNMDALSIPAAGGVDTTA+VMGDFSNGND Sbjct: 77 KYGITIEVKQFNDYVESINQYTAGSYDAVTITNMDALSIPAAGGVDTTALVMGDFSNGND 136 Query: 121 AVILKNKADLAAIKGQTVNLVEFSVSHYLLARALETSKLSEKDVKVVNTSDADIAAAYKT 180 AVILK K+DLAAIKGQ VNLVEFSVSHYLLARALET KL+EKD+KVVNTSDAD+AAAYKT Sbjct: 137 AVILKGKSDLAAIKGQKVNLVEFSVSHYLLARALETKKLAEKDIKVVNTSDADLAAAYKT 196 Query: 181 PDVSAVVTWNPIVTEILGSPDAKKVFDSSQIPGEIMDLMVVNTAVAKDNPDFAKALVGIW 240 P+V+AVVTWNPIV EIL +PDAKKVFDSSQIPGEI+DLMV NTAV KDNPDFAKALVGIW Sbjct: 197 PEVTAVVTWNPIVAEILTAPDAKKVFDSSQIPGEIIDLMVANTAVVKDNPDFAKALVGIW 256 Query: 241 YETLSKMTANDAAAKAAKEAMAKASGTDLAGFDSQLSTTKLFDKAIDAEAFTRSQTVGAT 300 YET++KMTA A KAAKEAMAKASGTDLAGFDSQL++TKLFDK DAEAFT+S TVG T Sbjct: 257 YETIAKMTAAGADGKAAKEAMAKASGTDLAGFDSQLASTKLFDKPADAEAFTKSATVGKT 316 Query: 301 MDRVRKFLFEKDLLGKGAKSADAVGIELADKSVLGDKSNVKLRFDPTYMDEAAKGKL 357 MDRVRKFLFEK+LLGKGAKSADAVGIEL DK+VLGDK+NVKLRFD +YMD AAKGKL Sbjct: 317 MDRVRKFLFEKELLGKGAKSADAVGIELGDKTVLGDKANVKLRFDASYMDLAAKGKL 373 >ref|YP_001990597.1| urea ABC transporter periplasmic protein [Rhodopseudomonas palustris TIE-1] gb|ACF00122.1| ABC transporter periplasmic binding protein, urea carboxylase region [Rhodopseudomonas palustris TIE-1] Length = 356 Score = 575 bits (1481), Expect = e-162, Method: Compositional matrix adjust. Identities = 294/351 (83%), Positives = 322/351 (91%) Query: 7 FLRSVVIGCAVVLAAAPAADAAPKKSFKVAWSIYVGWMPWGYAADTGIVKKWADKYGIAI 66 FL S+++ ++V + A AAPKK FKVAWSIYVGWMPWGYAADTGIVKKWADKYGI I Sbjct: 6 FLSSLILAGSIVALSVAGASAAPKKDFKVAWSIYVGWMPWGYAADTGIVKKWADKYGITI 65 Query: 67 EVKQFNDYVESINQYTAGGYDAVTITNMDALSIPAAGGVDTTAVVMGDFSNGNDAVILKN 126 EVKQFNDYVESINQYTAG YDAVTITNMDALSIPAAGGVDTTAV++GDFSNGNDAVILK+ Sbjct: 66 EVKQFNDYVESINQYTAGSYDAVTITNMDALSIPAAGGVDTTAVIVGDFSNGNDAVILKD 125 Query: 127 KADLAAIKGQTVNLVEFSVSHYLLARALETSKLSEKDVKVVNTSDADIAAAYKTPDVSAV 186 K D AAIKGQ VNLVEFSVSHYLLARALE++KLSEKDVKVVNTSDAD+AAAYKT DV+AV Sbjct: 126 KKDFAAIKGQKVNLVEFSVSHYLLARALESNKLSEKDVKVVNTSDADLAAAYKTADVTAV 185 Query: 187 VTWNPIVTEILGSPDAKKVFDSSQIPGEIMDLMVVNTAVAKDNPDFAKALVGIWYETLSK 246 VTWNPIV+EIL SPDA KVFDSSQIPGEIMDLMV NTAV KDNP+FAKALVGIWYET++K Sbjct: 186 VTWNPIVSEILASPDAHKVFDSSQIPGEIMDLMVANTAVVKDNPNFAKALVGIWYETMAK 245 Query: 247 MTANDAAAKAAKEAMAKASGTDLAGFDSQLSTTKLFDKAIDAEAFTRSQTVGATMDRVRK 306 MTA A AKAAKEAMAKASGTDLAGF+SQL++TKLF KA DAEAFT+S +G+TMDRVRK Sbjct: 246 MTAEGADAKAAKEAMAKASGTDLAGFESQLASTKLFSKAADAEAFTKSAAIGSTMDRVRK 305 Query: 307 FLFEKDLLGKGAKSADAVGIELADKSVLGDKSNVKLRFDPTYMDEAAKGKL 357 FLF+KDLLGKGAKSADAVGIELADKSVLGDK+NVKLRFDP++M+ AA GKL Sbjct: 306 FLFDKDLLGKGAKSADAVGIELADKSVLGDKANVKLRFDPSFMNAAAAGKL 356 >ref|NP_946760.1| taurine transport system protein [Rhodopseudomonas palustris CGA009] emb|CAE26853.1| possible taurine transport system protein [Rhodopseudomonas palustris CGA009] Length = 356 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 293/351 (83%), Positives = 321/351 (91%) Query: 7 FLRSVVIGCAVVLAAAPAADAAPKKSFKVAWSIYVGWMPWGYAADTGIVKKWADKYGIAI 66 FL S+++ ++V + A AAPKK FKVAWSIYVGWMPWGYAADTGIVKKWADKYGI I Sbjct: 6 FLSSLILAGSIVALSVAGASAAPKKDFKVAWSIYVGWMPWGYAADTGIVKKWADKYGITI 65 Query: 67 EVKQFNDYVESINQYTAGGYDAVTITNMDALSIPAAGGVDTTAVVMGDFSNGNDAVILKN 126 EVKQFNDYVESINQYTAG YDAVTITNMDALSIPAAGGVDTTAV++GDFSNGNDAVILK+ Sbjct: 66 EVKQFNDYVESINQYTAGSYDAVTITNMDALSIPAAGGVDTTAVIVGDFSNGNDAVILKD 125 Query: 127 KADLAAIKGQTVNLVEFSVSHYLLARALETSKLSEKDVKVVNTSDADIAAAYKTPDVSAV 186 K D AAIKGQ VNLVEFSVSHYLLARALE++KLSEKDVKVVNTSDAD+AAAYKT DV+AV Sbjct: 126 KKDFAAIKGQKVNLVEFSVSHYLLARALESNKLSEKDVKVVNTSDADLAAAYKTADVTAV 185 Query: 187 VTWNPIVTEILGSPDAKKVFDSSQIPGEIMDLMVVNTAVAKDNPDFAKALVGIWYETLSK 246 VTWNPIV+EIL SPDA KVFDSSQIPGEIMDLMV NTAV KDNP+FAKALVGIWYET++K Sbjct: 186 VTWNPIVSEILASPDAHKVFDSSQIPGEIMDLMVANTAVVKDNPNFAKALVGIWYETMAK 245 Query: 247 MTANDAAAKAAKEAMAKASGTDLAGFDSQLSTTKLFDKAIDAEAFTRSQTVGATMDRVRK 306 MTA A AKAAKEAMAKASGTDLAGF+SQL++TKLF KA DAEAFT+S +G+TMDRVRK Sbjct: 246 MTAEGADAKAAKEAMAKASGTDLAGFESQLASTKLFSKATDAEAFTKSAAIGSTMDRVRK 305 Query: 307 FLFEKDLLGKGAKSADAVGIELADKSVLGDKSNVKLRFDPTYMDEAAKGKL 357 FLF+KDLLGKGAKSADAVGIELADKSVLGDK+NVKLRFDP++M+ AA KL Sbjct: 306 FLFDKDLLGKGAKSADAVGIELADKSVLGDKANVKLRFDPSFMNAAAASKL 356 >ref|YP_004107491.1| ABC transporter periplasmic-binding protein [Rhodopseudomonas palustris DX-1] gb|ADU42758.1| ABC transporter periplasmic binding protein, urea carboxylase region [Rhodopseudomonas palustris DX-1] Length = 356 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 291/351 (82%), Positives = 321/351 (91%) Query: 7 FLRSVVIGCAVVLAAAPAADAAPKKSFKVAWSIYVGWMPWGYAADTGIVKKWADKYGIAI 66 L S+++ ++V + A AAPKK FKVAWSIYVGWMPWGYAADTGIVKKWADKYGI I Sbjct: 6 LLSSLILAGSIVALSVAGASAAPKKDFKVAWSIYVGWMPWGYAADTGIVKKWADKYGITI 65 Query: 67 EVKQFNDYVESINQYTAGGYDAVTITNMDALSIPAAGGVDTTAVVMGDFSNGNDAVILKN 126 EVKQFNDYVESINQYTAG +DAVTITNMDALSIPAAGGVDTTAV++GDFSNGNDAVILK+ Sbjct: 66 EVKQFNDYVESINQYTAGSFDAVTITNMDALSIPAAGGVDTTAVIVGDFSNGNDAVILKD 125 Query: 127 KADLAAIKGQTVNLVEFSVSHYLLARALETSKLSEKDVKVVNTSDADIAAAYKTPDVSAV 186 K DLAAIKGQ VNLVEFSVSHYLLARALE++KL+EKD+KVVNTSDAD+AAAYKT DV+AV Sbjct: 126 KKDLAAIKGQKVNLVEFSVSHYLLARALESNKLTEKDIKVVNTSDADLAAAYKTADVTAV 185 Query: 187 VTWNPIVTEILGSPDAKKVFDSSQIPGEIMDLMVVNTAVAKDNPDFAKALVGIWYETLSK 246 VTWNPIV+EIL SPDA KVFDSSQIPGEIMDLMV NTAV KDNP+FAKALVGIWYET++K Sbjct: 186 VTWNPIVSEILSSPDAHKVFDSSQIPGEIMDLMVANTAVVKDNPNFAKALVGIWYETMAK 245 Query: 247 MTANDAAAKAAKEAMAKASGTDLAGFDSQLSTTKLFDKAIDAEAFTRSQTVGATMDRVRK 306 MTA A AKAAKEAMAKASGTDLAGF+SQL++T+LF KA DAEAFT+S +G+TMDRVRK Sbjct: 246 MTAEGAEAKAAKEAMAKASGTDLAGFESQLASTRLFSKAADAEAFTKSAAIGSTMDRVRK 305 Query: 307 FLFEKDLLGKGAKSADAVGIELADKSVLGDKSNVKLRFDPTYMDEAAKGKL 357 FLF+KDLLGKGAK ADAVGIELADKSVLGDKSNVKLRFDP++MD AA GKL Sbjct: 306 FLFDKDLLGKGAKLADAVGIELADKSVLGDKSNVKLRFDPSFMDMAAAGKL 356