BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0023.p (272 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_534376.1| binding-protein-dependent transport systems inn... 454 e-126 ref|YP_569320.1| binding-protein-dependent transport systems inn... 453 e-125 ref|NP_946759.1| taurine transport system permease [Rhodopseudom... 449 e-124 ref|YP_001990596.1| ABC transporter inner membrane protein [Rhod... 447 e-124 ref|YP_004107490.1| binding-protein-dependent transporter inner ... 446 e-123 >ref|YP_534376.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB18] gb|ABD90057.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB18] Length = 272 Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust. Identities = 229/272 (84%), Positives = 246/272 (90%) Query: 1 MRLVNIRPGRQTRFYLLALPFVLVAIAYFAGSSARLAQNPNDKLLPALPSMVQAVKQMAF 60 MRL+NIRPGRQ Y+ ALPFVLVAI Y GS ARLA+NPNDKLLPAL SM QAVKQMAF Sbjct: 1 MRLINIRPGRQLALYMAALPFVLVAIGYVLGSEARLAENPNDKLLPALSSMAQAVKQMAF 60 Query: 61 EVDPRTGSYLMASDTVASLGRLGSALAISTVAALVLGIVIGLLPGANALLGPFVSVTSMV 120 ++D RTGSYLM SDT+ASLGRL SALAIST AAL+ GIVIGLLP ANA+LG FVSVTSMV Sbjct: 61 QLDARTGSYLMLSDTLASLGRLLSALAISTTAALLFGIVIGLLPAANAMLGSFVSVTSMV 120 Query: 121 PPLALLPILFIVMGLGENSKIALIVIGTLPCMIRDLAMKVQELPREQIVKAQTLGASTWQ 180 PPLALLPILFIVMGLGENSKIALIVIGTLPC+IRDL+MKV ELPREQ++KAQTLGAS+WQ Sbjct: 121 PPLALLPILFIVMGLGENSKIALIVIGTLPCLIRDLSMKVLELPREQLIKAQTLGASSWQ 180 Query: 181 IALRVAMPQTLPRLIDVLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY 240 IALRV +PQ LPRLID LRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMD+IIPY Sbjct: 181 IALRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDIIIPY 240 Query: 241 VAWITLLAFLIDVGLRVTQRKLFPWFASVRAE 272 V WITLLAFL+D LR+ QRK FPWFASVRAE Sbjct: 241 VIWITLLAFLMDFALRLLQRKAFPWFASVRAE 272 >ref|YP_569320.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB5] gb|ABE39419.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB5] Length = 272 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 231/272 (84%), Positives = 245/272 (90%) Query: 1 MRLVNIRPGRQTRFYLLALPFVLVAIAYFAGSSARLAQNPNDKLLPALPSMVQAVKQMAF 60 MRL+N+RPGRQ FY+ ALPFVLVAIAY GS ARLA+NPNDKLLPAL SM QAVKQMAF Sbjct: 1 MRLINLRPGRQLAFYMAALPFVLVAIAYVLGSEARLAENPNDKLLPALSSMAQAVKQMAF 60 Query: 61 EVDPRTGSYLMASDTVASLGRLGSALAISTVAALVLGIVIGLLPGANALLGPFVSVTSMV 120 +VD RTGSYLM SDT ASL RL SALAIST AL+ GIV+GLLP ANA+LG FVSVTSMV Sbjct: 61 QVDARTGSYLMWSDTFASLVRLLSALAISTSLALLFGIVVGLLPAANAMLGAFVSVTSMV 120 Query: 121 PPLALLPILFIVMGLGENSKIALIVIGTLPCMIRDLAMKVQELPREQIVKAQTLGASTWQ 180 PPLALLPILFIVMGLGEN+KIALIVIGTLPCMIRDLAMKV ELPREQ++KAQTLGASTWQ Sbjct: 121 PPLALLPILFIVMGLGENAKIALIVIGTLPCMIRDLAMKVLELPREQLIKAQTLGASTWQ 180 Query: 181 IALRVAMPQTLPRLIDVLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY 240 IALRV +PQ LPRLID LRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY Sbjct: 181 IALRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY 240 Query: 241 VAWITLLAFLIDVGLRVTQRKLFPWFASVRAE 272 VAWITLLAF +D LR+ QRK FPWFASVRAE Sbjct: 241 VAWITLLAFAMDFALRLIQRKAFPWFASVRAE 272 >ref|NP_946759.1| taurine transport system permease [Rhodopseudomonas palustris CGA009] emb|CAE26852.1| possible taurine transport system permease protein [Rhodopseudomonas palustris CGA009] Length = 272 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 230/272 (84%), Positives = 245/272 (90%) Query: 1 MRLVNIRPGRQTRFYLLALPFVLVAIAYFAGSSARLAQNPNDKLLPALPSMVQAVKQMAF 60 MR VNIRPGRQ Y+ ALPFVLV IAY GS ARLA+NPNDKLLPAL SM QAVKQMAF Sbjct: 1 MRWVNIRPGRQLAIYMAALPFVLVIIAYLLGSGARLAENPNDKLLPALSSMGQAVKQMAF 60 Query: 61 EVDPRTGSYLMASDTVASLGRLGSALAISTVAALVLGIVIGLLPGANALLGPFVSVTSMV 120 +VD RTGSYL+ SDT+ASL RLG+ALAIST ALV GIVIGLLP ANALLG FVSVTSMV Sbjct: 61 QVDARTGSYLLWSDTLASLERLGAALAISTSLALVFGIVIGLLPAANALLGSFVSVTSMV 120 Query: 121 PPLALLPILFIVMGLGENSKIALIVIGTLPCMIRDLAMKVQELPREQIVKAQTLGASTWQ 180 PPLALLPILFIVMGLGENSKIALIVIGTLPC+IRDL+MKV ELPREQ++KAQTLGASTWQ Sbjct: 121 PPLALLPILFIVMGLGENSKIALIVIGTLPCIIRDLSMKVLELPREQLIKAQTLGASTWQ 180 Query: 181 IALRVAMPQTLPRLIDVLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY 240 IALRV +PQ LPRLID LRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY Sbjct: 181 IALRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY 240 Query: 241 VAWITLLAFLIDVGLRVTQRKLFPWFASVRAE 272 V WITLLAFL+D+ LR+ QRK FPWFA+VRAE Sbjct: 241 VVWITLLAFLMDLALRLIQRKAFPWFAAVRAE 272 >ref|YP_001990596.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris TIE-1] gb|ACF00121.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris TIE-1] Length = 272 Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust. Identities = 229/272 (84%), Positives = 244/272 (89%) Query: 1 MRLVNIRPGRQTRFYLLALPFVLVAIAYFAGSSARLAQNPNDKLLPALPSMVQAVKQMAF 60 MR VNIRPGRQ Y+ ALPFVLV IAY GS ARLA+NPNDKLLPAL SM QAVKQMAF Sbjct: 1 MRWVNIRPGRQLAIYMAALPFVLVIIAYLLGSGARLAENPNDKLLPALSSMGQAVKQMAF 60 Query: 61 EVDPRTGSYLMASDTVASLGRLGSALAISTVAALVLGIVIGLLPGANALLGPFVSVTSMV 120 +VD RTGSYL+ SDT+ASL RLG+AL IST ALV GIVIGLLP ANALLG FVSVTSMV Sbjct: 61 QVDARTGSYLLWSDTLASLERLGAALTISTSLALVFGIVIGLLPAANALLGSFVSVTSMV 120 Query: 121 PPLALLPILFIVMGLGENSKIALIVIGTLPCMIRDLAMKVQELPREQIVKAQTLGASTWQ 180 PPLALLPILFIVMGLGENSKIALIVIGTLPC+IRDL+MKV ELPREQ++KAQTLGASTWQ Sbjct: 121 PPLALLPILFIVMGLGENSKIALIVIGTLPCIIRDLSMKVLELPREQLIKAQTLGASTWQ 180 Query: 181 IALRVAMPQTLPRLIDVLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY 240 IALRV +PQ LPRLID LRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY Sbjct: 181 IALRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY 240 Query: 241 VAWITLLAFLIDVGLRVTQRKLFPWFASVRAE 272 V WITLLAFL+D+ LR+ QRK FPWFA+VRAE Sbjct: 241 VVWITLLAFLMDLALRLIQRKAFPWFAAVRAE 272 >ref|YP_004107490.1| binding-protein-dependent transporter inner membrane component [Rhodopseudomonas palustris DX-1] gb|ADU42757.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris DX-1] Length = 272 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 229/272 (84%), Positives = 244/272 (89%) Query: 1 MRLVNIRPGRQTRFYLLALPFVLVAIAYFAGSSARLAQNPNDKLLPALPSMVQAVKQMAF 60 MR VNIRPGRQ Y+ ALPFVLV IAY GS ARLA+NPNDKLLPAL SM QAVKQMAF Sbjct: 1 MRWVNIRPGRQLAIYMAALPFVLVIIAYLLGSGARLAENPNDKLLPALTSMGQAVKQMAF 60 Query: 61 EVDPRTGSYLMASDTVASLGRLGSALAISTVAALVLGIVIGLLPGANALLGPFVSVTSMV 120 +VD RTGSYL+ +DT+ASL RLG+ALAIST ALV GIVIGLLP ANALLG FVSVTSMV Sbjct: 61 QVDARTGSYLLWTDTLASLERLGAALAISTSLALVFGIVIGLLPAANALLGSFVSVTSMV 120 Query: 121 PPLALLPILFIVMGLGENSKIALIVIGTLPCMIRDLAMKVQELPREQIVKAQTLGASTWQ 180 PPLALLPILFIVMGLGENSKIALIVIGTLP MIRDLAM+V ELPREQ++KAQTLGASTWQ Sbjct: 121 PPLALLPILFIVMGLGENSKIALIVIGTLPAMIRDLAMRVMELPREQLIKAQTLGASTWQ 180 Query: 181 IALRVAMPQTLPRLIDVLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY 240 IALRV +PQ LPRLID LRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY Sbjct: 181 IALRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY 240 Query: 241 VAWITLLAFLIDVGLRVTQRKLFPWFASVRAE 272 V WITLLAFL+D+ LR+ QRK FPWFA+VRAE Sbjct: 241 VVWITLLAFLMDLALRLIQRKAFPWFAAVRAE 272