BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0020.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001990593.1| urea carboxylase-associated protein 1 [Rhodo... 377 e-103 ref|NP_946756.1| hypothetical protein RPA1406 [Rhodopseudomonas ... 376 e-102 ref|YP_780150.1| hypothetical protein RPE_1218 [Rhodopseudomonas... 375 e-102 ref|YP_004107487.1| urea carboxylase-associated protein 1 [Rhodo... 373 e-101 ref|YP_569323.1| hypothetical protein RPD_2187 [Rhodopseudomonas... 370 e-101 >ref|YP_001990593.1| urea carboxylase-associated protein 1 [Rhodopseudomonas palustris TIE-1] gb|ACF00118.1| urea carboxylase-associated protein 1 [Rhodopseudomonas palustris TIE-1] Length = 211 Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust. Identities = 173/209 (82%), Positives = 188/209 (89%) Query: 3 VQSVRTGGRIVLDVEIPARKPWSAIIRKGQTLRITDSHGQQAVDTLFYCASDFGERYSGQ 62 + ++ RIVLD EIPAR PWSA IRKGQTLRI DSHGQQAVDTLFY ASD GERYSGQ Sbjct: 1 MTTIPASARIVLDTEIPARVPWSATIRKGQTLRIVDSHGQQAVDTLFYAASDHGERYSGQ 60 Query: 63 DTLRAQGSAYVGLGTRIMSNEGRVMLRVTADSCGLHDTSAGACSCESNTVRFGHQTRYQH 122 DTLRAQGSAYV GTRIMS EGR MLR+ ADSCGLHDTSAGACSCESNTVRFGHQT+Y H Sbjct: 61 DTLRAQGSAYVTTGTRIMSTEGRTMLRMVADSCGLHDTSAGACSCESNTVRFGHQTKYLH 120 Query: 123 ACRENFVIEAAKHGMSKRDIVPNLNFFMNVPIDPAGNFTVVDGVSKPGDAIELVAEMDVL 182 ACRENFV+EAAKHG+SKRDIVPNLNFFMNVP+DP GNFTVVDGVSKPGD +E+VAEMDVL Sbjct: 121 ACRENFVLEAAKHGLSKRDIVPNLNFFMNVPLDPDGNFTVVDGVSKPGDYVEMVAEMDVL 180 Query: 183 CLISNCPQINNPCNGFFPTPVQVTIFDVA 211 CLISNCPQ+NNPCNGFFPTP+QV I++ + Sbjct: 181 CLISNCPQVNNPCNGFFPTPIQVVIYEAS 209 >ref|NP_946756.1| hypothetical protein RPA1406 [Rhodopseudomonas palustris CGA009] emb|CAE26849.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 211 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 173/205 (84%), Positives = 186/205 (90%) Query: 5 SVRTGGRIVLDVEIPARKPWSAIIRKGQTLRITDSHGQQAVDTLFYCASDFGERYSGQDT 64 ++ RIVLD EIPAR PWSAIIRKGQTLRI DSHGQQAVDTLFY A D GERYSGQDT Sbjct: 3 AIPASARIVLDTEIPARVPWSAIIRKGQTLRIVDSHGQQAVDTLFYAADDHGERYSGQDT 62 Query: 65 LRAQGSAYVGLGTRIMSNEGRVMLRVTADSCGLHDTSAGACSCESNTVRFGHQTRYQHAC 124 LRAQGSAYV GTRIMS EGR MLR+ ADSCGLHDTSAGACSCESNTVRFGHQT+Y HAC Sbjct: 63 LRAQGSAYVTTGTRIMSTEGRTMLRMVADSCGLHDTSAGACSCESNTVRFGHQTKYLHAC 122 Query: 125 RENFVIEAAKHGMSKRDIVPNLNFFMNVPIDPAGNFTVVDGVSKPGDAIELVAEMDVLCL 184 RENFV+EAAKHG+SKRDIVPNLNFFMNVP+DP GNFTVVDGVSKPGD +E+VAEMDVLCL Sbjct: 123 RENFVLEAAKHGLSKRDIVPNLNFFMNVPLDPDGNFTVVDGVSKPGDYVEMVAEMDVLCL 182 Query: 185 ISNCPQINNPCNGFFPTPVQVTIFD 209 ISNCPQ+NNPCNGFFPTP+QV I++ Sbjct: 183 ISNCPQVNNPCNGFFPTPIQVVIYE 207 >ref|YP_780150.1| hypothetical protein RPE_1218 [Rhodopseudomonas palustris BisA53] gb|ABJ05170.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 213 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 168/208 (80%), Positives = 190/208 (91%) Query: 1 MTVQSVRTGGRIVLDVEIPARKPWSAIIRKGQTLRITDSHGQQAVDTLFYCASDFGERYS 60 M++ ++ RI+L+ +I AR PWSAIIRKGQTLRI DSHGQQAVDTLFY A D+GERYS Sbjct: 1 MSMTAIPASARILLEAKIAARVPWSAIIRKGQTLRIIDSHGQQAVDTLFYAAHDYGERYS 60 Query: 61 GQDTLRAQGSAYVGLGTRIMSNEGRVMLRVTADSCGLHDTSAGACSCESNTVRFGHQTRY 120 GQDTLRAQGSAY+ GT+IMS EGR+MLR+ ADSCGLHDTSAGACSCESNTVRFGHQT+Y Sbjct: 61 GQDTLRAQGSAYISTGTKIMSTEGRIMLRMVADSCGLHDTSAGACSCESNTVRFGHQTKY 120 Query: 121 QHACRENFVIEAAKHGMSKRDIVPNLNFFMNVPIDPAGNFTVVDGVSKPGDAIELVAEMD 180 HACRENF+IEAAKHG+SKRD+VPNLNFFMNVPIDPAGNFTVVDGVSKPGD +E+VAEMD Sbjct: 121 LHACRENFLIEAAKHGLSKRDLVPNLNFFMNVPIDPAGNFTVVDGVSKPGDYVEMVAEMD 180 Query: 181 VLCLISNCPQINNPCNGFFPTPVQVTIF 208 VLCLISNCPQ+NNPCNGFFPTP++V I+ Sbjct: 181 VLCLISNCPQVNNPCNGFFPTPIEVVIY 208 >ref|YP_004107487.1| urea carboxylase-associated protein 1 [Rhodopseudomonas palustris DX-1] gb|ADU42754.1| urea carboxylase-associated protein 1 [Rhodopseudomonas palustris DX-1] Length = 211 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 171/207 (82%), Positives = 187/207 (90%) Query: 3 VQSVRTGGRIVLDVEIPARKPWSAIIRKGQTLRITDSHGQQAVDTLFYCASDFGERYSGQ 62 + ++ RIVLD EIPAR PWSAIIRKGQTLRI DSHGQQAVDTLFY A D GERYSGQ Sbjct: 1 MTAIPASARIVLDTEIPARVPWSAIIRKGQTLRIVDSHGQQAVDTLFYAADDHGERYSGQ 60 Query: 63 DTLRAQGSAYVGLGTRIMSNEGRVMLRVTADSCGLHDTSAGACSCESNTVRFGHQTRYQH 122 DTLRAQGSAYV GTRIMS EGR MLR+ ADSCGLHDTSAGACSCESNTVRFGHQT+Y H Sbjct: 61 DTLRAQGSAYVTTGTRIMSTEGRTMLRMVADSCGLHDTSAGACSCESNTVRFGHQTKYLH 120 Query: 123 ACRENFVIEAAKHGMSKRDIVPNLNFFMNVPIDPAGNFTVVDGVSKPGDAIELVAEMDVL 182 ACRENFV+EAAK+G+SKRDIVPNLNFFMNVP+D +GNFTVVDGVSKPGD +E+VAEMDVL Sbjct: 121 ACRENFVLEAAKYGLSKRDIVPNLNFFMNVPLDTSGNFTVVDGVSKPGDYVEMVAEMDVL 180 Query: 183 CLISNCPQINNPCNGFFPTPVQVTIFD 209 CLISNCPQ+NNPCNGFFPTP+QV I++ Sbjct: 181 CLISNCPQVNNPCNGFFPTPIQVVIYE 207 >ref|YP_569323.1| hypothetical protein RPD_2187 [Rhodopseudomonas palustris BisB5] gb|ABE39422.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 211 Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust. Identities = 166/207 (80%), Positives = 185/207 (89%) Query: 5 SVRTGGRIVLDVEIPARKPWSAIIRKGQTLRITDSHGQQAVDTLFYCASDFGERYSGQDT 64 ++ RIVLD +PAR PWSAIIRKGQTLRI D+HGQQAVDTLF+ A D+GERYSGQDT Sbjct: 3 AISVSARIVLDATVPARAPWSAIIRKGQTLRIVDTHGQQAVDTLFFAADDYGERYSGQDT 62 Query: 65 LRAQGSAYVGLGTRIMSNEGRVMLRVTADSCGLHDTSAGACSCESNTVRFGHQTRYQHAC 124 LRAQG+AYV GTRIMS EGR MLR+ DSCGLHDTSAGACSCESNTVRFGHQT+Y HAC Sbjct: 63 LRAQGAAYVSTGTRIMSTEGRTMLRMVVDSCGLHDTSAGACSCESNTVRFGHQTKYLHAC 122 Query: 125 RENFVIEAAKHGMSKRDIVPNLNFFMNVPIDPAGNFTVVDGVSKPGDAIELVAEMDVLCL 184 RENF+IEAAKHG+SKRDIVPNLNFFMNV IDP GNFTVVDGVS+PGD +E+VAEMDVLCL Sbjct: 123 RENFLIEAAKHGLSKRDIVPNLNFFMNVSIDPTGNFTVVDGVSRPGDYVEMVAEMDVLCL 182 Query: 185 ISNCPQINNPCNGFFPTPVQVTIFDVA 211 ISNCPQ+NNPCNGFFPTP+QV I++ + Sbjct: 183 ISNCPQVNNPCNGFFPTPIQVVIYETS 209