BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0013.p (430 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_534013.1| inner-membrane translocator [Rhodopseudomonas p... 547 e-153 ref|YP_783128.1| inner-membrane translocator [Rhodopseudomonas p... 542 e-152 ref|YP_004110579.1| inner-membrane translocator [Rhodopseudomona... 525 e-147 ref|YP_485193.1| inner-membrane translocator [Rhodopseudomonas p... 524 e-147 ref|ZP_08630813.1| putative branched-chain amino acid ABC transp... 523 e-146 >ref|YP_534013.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] gb|ABD89694.1| inner-membrane translocator [Rhodopseudomonas palustris BisB18] Length = 433 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 273/426 (64%), Positives = 342/426 (80%), Gaps = 6/426 (1%) Query: 8 SIAAAKQEPG--SALSFYAVWLLAAITLVVLPLVFGAGGSLTSFCLIGIAIIFALSYNIL 65 +++AA P L FY +W+ A+ L++LP +F +GGSLT+F LIGI+IIFALSYNIL Sbjct: 5 TVSAAPPPPALVDKLKFYGIWIAVALMLLLLPKIFSSGGSLTTFSLIGISIIFALSYNIL 64 Query: 66 LGQTGLLSFGHAVQYGLGGFLAVHVMNAVASHNWPIPLPVIPLVGGIGGMAFALLVGWVM 125 LGQTG+LSFGHAV YGLGGFLA+H +N + H +PIPLP++PL+GG G+ FA L+GWVM Sbjct: 65 LGQTGMLSFGHAVYYGLGGFLAIHAINFIVGHKFPIPLPLVPLIGGATGLFFAALIGWVM 124 Query: 126 TKRAGTVFAMISLGIGELVASSSLILRSVFGGESGITTDRTSLMPMFGWTFGPQIQVYYL 185 T+R+GT FAMISLG+ ELVASS+LILRS FGGE+G++ +RT L+ +F W FGPQIQ+YYL Sbjct: 125 TQRSGTAFAMISLGLAELVASSALILRSFFGGEAGVSANRTKLLKVFDWNFGPQIQIYYL 184 Query: 186 IAFWVMVSAIAMYALTRTPLGRICNAVRDNPERVEFIGYDPHVVRYLAYMFAGFFAGIAG 245 +A W +++ IAMYALTRTPLGR+CNAVRDNPERV+F+GYDPHV+RYLA+ FAGFFAGIAG Sbjct: 185 VAAWTLLAVIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVIRYLAFCFAGFFAGIAG 244 Query: 246 GLTAINFEIANSAYLGATQSGLVLFSAFIGGTAYFFGPILGAILVTYLQLGLTSVTSVWQ 305 L AINFEIANSAYLGA QSG VLF+A+IGG +F GPI+GAI VT+L LGL+ VT VWQ Sbjct: 245 ALAAINFEIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTFLSLGLSDVTPVWQ 304 Query: 306 LYFGIIFIGIVMFAPGGIAGILMKHRPLIRAGTLSTVIPSYLVAAIPTLALALGVILTIE 365 LYFG+ FI +VMFAPGG+ G+LM HRPLI+ ++ V+PSY VA +PTLA+ G++L IE Sbjct: 305 LYFGLFFIAVVMFAPGGVTGLLMMHRPLIKGRAMARVLPSYAVALLPTLAMITGLMLAIE 364 Query: 366 TVARFS---GGEP-INLLGIPFVATAPTTWATAAVLLVGGFLVARITWRRVAEAWDRAAT 421 + ++ G +P I GIPF A +P TWATAAVL+VGGF +AR++WRRV AWD A T Sbjct: 365 STVHYTVNPGEDPHIRSFGIPFDAASPLTWATAAVLIVGGFALARLSWRRVGHAWDEALT 424 Query: 422 VARDRG 427 AR G Sbjct: 425 TARQNG 430 >ref|YP_783128.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] gb|ABJ08148.1| inner-membrane translocator [Rhodopseudomonas palustris BisA53] Length = 433 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 266/425 (62%), Positives = 331/425 (77%), Gaps = 4/425 (0%) Query: 6 TPSIAAAKQEPGSALSFYAVWLLAAITLVVLPLVFGAGGSLTSFCLIGIAIIFALSYNIL 65 T IA L FY +WL A+ L+VLP VF +GGSLT+F LIGI+IIFALSYNIL Sbjct: 5 TARIAPPLPSLAEKLKFYGMWLGVAVLLIVLPHVFSSGGSLTTFSLIGISIIFALSYNIL 64 Query: 66 LGQTGLLSFGHAVQYGLGGFLAVHVMNAVASHNWPIPLPVIPLVGGIGGMAFALLVGWVM 125 LGQTG+LSFGHAV YGLGGFLA+H +N + WPIPLP++P++GG G+ FA L+GWVM Sbjct: 65 LGQTGMLSFGHAVYYGLGGFLAIHAINLIGGAKWPIPLPLVPVIGGATGLFFAALIGWVM 124 Query: 126 TKRAGTVFAMISLGIGELVASSSLILRSVFGGESGITTDRTSLMPMFGWTFGPQIQVYYL 185 T+R+GT FAMISLG+ ELVASS+LILRS FGGE+GI+ +RT + +F ++FGPQIQ+YYL Sbjct: 125 TQRSGTAFAMISLGLAELVASSALILRSFFGGEAGISANRTKMFRVFDFSFGPQIQIYYL 184 Query: 186 IAFWVMVSAIAMYALTRTPLGRICNAVRDNPERVEFIGYDPHVVRYLAYMFAGFFAGIAG 245 +A W +++ + MYALTRTPLGR+CNAVRDNPERV+F+GYDPHVVRYLA+ FAG FAG+AG Sbjct: 185 VAAWTLIAIVLMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFAGLFAGVAG 244 Query: 246 GLTAINFEIANSAYLGATQSGLVLFSAFIGGTAYFFGPILGAILVTYLQLGLTSVTSVWQ 305 L AINFEIANSAYLGA QSG VLF+A+IGG +F GPI+GAI VT L LGL+ VTSVWQ Sbjct: 245 SLAAINFEIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTLLSLGLSDVTSVWQ 304 Query: 306 LYFGIIFIGIVMFAPGGIAGILMKHRPLIRAGTLSTVIPSYLVAAIPTLALALGVILTIE 365 LYFG+ FIG+VMF PGG+ G++M HRPL RAG L+ ++PSYL+A +PTLA +G++L IE Sbjct: 305 LYFGLFFIGVVMFTPGGLTGLMMMHRPLWRAGMLTRMLPSYLLAGVPTLAFIIGLMLAIE 364 Query: 366 TVARFS---GGEP-INLLGIPFVATAPTTWATAAVLLVGGFLVARITWRRVAEAWDRAAT 421 T F+ +P I GIPF A++P TW L+V GF++AR+TWRRV WD T Sbjct: 365 TTVHFTVHPNEDPHIRAFGIPFDASSPLTWGLTLALIVVGFILARMTWRRVGHVWDETLT 424 Query: 422 VARDR 426 AR + Sbjct: 425 AARAK 429 >ref|YP_004110579.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gb|ADU45846.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 433 Score = 525 bits (1351), Expect = e-147, Method: Compositional matrix adjust. Identities = 269/427 (62%), Positives = 343/427 (80%), Gaps = 8/427 (1%) Query: 8 SIAAAKQEPGSALS----FYAVWLLAAITLVVLPLVFGAGGSLTSFCLIGIAIIFALSYN 63 +A++ P LS FYA+W+ A+ L++LP VF +GGSLT+F L+GI+IIFALSYN Sbjct: 3 DLASSAAPPRPTLSDRAKFYAIWIATALALLLLPKVFASGGSLTTFSLVGISIIFALSYN 62 Query: 64 ILLGQTGLLSFGHAVQYGLGGFLAVHVMNAVASHNWPIPLPVIPLVGGIGGMAFALLVGW 123 ILLGQTG+LSFGHAV YGLGGFLA+H++N +A + +PIPLP++PL+GG+ G+ FA L+GW Sbjct: 63 ILLGQTGMLSFGHAVYYGLGGFLAIHIINILAGNKFPIPLPLVPLIGGVAGLFFAALIGW 122 Query: 124 VMTKRAGTVFAMISLGIGELVASSSLILRSVFGGESGITTDRTSLMPMFGWTFGPQIQVY 183 VMT+R+GT FAMISLG+ ELVASS+LILRS FGGE+GI+ +RT L +F +FGPQIQ+Y Sbjct: 123 VMTQRSGTAFAMISLGLAELVASSALILRSFFGGEAGISANRTKLFRVFDLSFGPQIQIY 182 Query: 184 YLIAFWVMVSAIAMYALTRTPLGRICNAVRDNPERVEFIGYDPHVVRYLAYMFAGFFAGI 243 YL+A W +++ IAMYALTRTPLGR+CNAVRDNPERV+F+GYDPHVVRYLA+ F+GFFAGI Sbjct: 183 YLVAAWTLIAIIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFSGFFAGI 242 Query: 244 AGGLTAINFEIANSAYLGATQSGLVLFSAFIGGTAYFFGPILGAILVTYLQLGLTSVTSV 303 AG L AINFEIANSAYLGA QSG VLF+A+IGG +F GPI+GAI VT L L L+ +T V Sbjct: 243 AGALAAINFEIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTVLSLALSDLTQV 302 Query: 304 WQLYFGIIFIGIVMFAPGGIAGILMKHRPLIRAGTLSTVIPSYLVAAIPTLALALGVILT 363 WQLYFG+ FI +V+FAPGGI G+LM HRPL+RAG L ++PSYL+AA+PTLAL +G++L Sbjct: 303 WQLYFGLFFIIVVLFAPGGITGVLMMHRPLLRAGMLMRMLPSYLIAALPTLALLIGLMLM 362 Query: 364 IETVARFS---GGEPINL-LGIPFVATAPTTWATAAVLLVGGFLVARITWRRVAEAWDRA 419 IET ++ +P + GIPF A +P TWA +AVL+V GF++AR+ W RVA+ WD Sbjct: 363 IETTVHYTVNPHEDPNRVAFGIPFNAASPLTWAASAVLVVVGFILARMAWSRVAQTWDAT 422 Query: 420 ATVARDR 426 T AR + Sbjct: 423 LTAARAK 429 >ref|YP_485193.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gb|ABD06282.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 433 Score = 524 bits (1350), Expect = e-147, Method: Compositional matrix adjust. Identities = 268/430 (62%), Positives = 341/430 (79%), Gaps = 5/430 (1%) Query: 1 MTNASTPSIAAAKQEPGSALSFYAVWLLAAITLVVLPLVFGAGGSLTSFCLIGIAIIFAL 60 MT+ ++ +A + L FY VW+ A+TL++LP +F +GGSLT+F L+GI+IIFAL Sbjct: 1 MTDLAS-RVAPPRPALSDRLKFYGVWIATALTLLLLPQIFSSGGSLTTFSLVGISIIFAL 59 Query: 61 SYNILLGQTGLLSFGHAVQYGLGGFLAVHVMNAVASHNWPIPLPVIPLVGGIGGMAFALL 120 SYNILLGQTG+LSFGHAV YGLGGFLA+H +N + ++ W IPLP++PL+GG+ G+ A L Sbjct: 60 SYNILLGQTGMLSFGHAVYYGLGGFLAIHAINLLGANKWAIPLPLVPLIGGMAGLFLAAL 119 Query: 121 VGWVMTKRAGTVFAMISLGIGELVASSSLILRSVFGGESGITTDRTSLMPMFGWTFGPQI 180 +GWVMT+R+GT FAMISLG+ ELVASS+LILR+ FGGE+GI+ +RT L +FG +FGPQI Sbjct: 120 IGWVMTQRSGTAFAMISLGLAELVASSALILRTFFGGEAGISANRTKLFKVFGLSFGPQI 179 Query: 181 QVYYLIAFWVMVSAIAMYALTRTPLGRICNAVRDNPERVEFIGYDPHVVRYLAYMFAGFF 240 Q+YYL+A W +++ IAMYALTRTPLGR+CNAVRDNPERV+F+GYDPHVVRYLA+ FAGFF Sbjct: 180 QIYYLVAAWTLIAIIAMYALTRTPLGRMCNAVRDNPERVQFVGYDPHVVRYLAFCFAGFF 239 Query: 241 AGIAGGLTAINFEIANSAYLGATQSGLVLFSAFIGGTAYFFGPILGAILVTYLQLGLTSV 300 AGIAG L AINFEIANSAYLGA QSG VLF+A+IGG +F GPI+GAI VT L LGL+ + Sbjct: 240 AGIAGALAAINFEIANSAYLGAVQSGTVLFAAYIGGIGFFIGPIVGAIFVTILSLGLSDL 299 Query: 301 TSVWQLYFGIIFIGIVMFAPGGIAGILMKHRPLIRAGTLSTVIPSYLVAAIPTLALALGV 360 T VWQLYFG+ FI +V++APGGI G+LM HRPLIRAG LS ++PSYL+AA+PTLAL G+ Sbjct: 300 TQVWQLYFGLFFIAVVLYAPGGITGLLMMHRPLIRAGMLSRMLPSYLIAALPTLALVTGL 359 Query: 361 ILTIETVARFS---GGEPI-NLLGIPFVATAPTTWATAAVLLVGGFLVARITWRRVAEAW 416 +L IET+ ++ +P GIPF A +P TWA +A L+VGGF + R+ W RV + W Sbjct: 360 MLMIETIVHYTVNPHEDPYRKAFGIPFDAASPLTWAISAALIVGGFWLCRMAWARVGQTW 419 Query: 417 DRAATVARDR 426 D T AR + Sbjct: 420 DETLTAARAK 429 >ref|ZP_08630813.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06345.1| putative branched-chain amino acid ABC transporter permease [Bradyrhizobiaceae bacterium SG-6C] Length = 428 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 278/430 (64%), Positives = 343/430 (79%), Gaps = 10/430 (2%) Query: 1 MTNASTPSIAAAKQEPGSALSFYAVWLLAAITLVVLPLVFGAGGSLTSFCLIGIAIIFAL 60 M A P A+ K + FY +W+ A+ L+VLP +F +GGSLT+FCLIGI+IIFAL Sbjct: 1 MRAAPPPPSASDKAK------FYGLWVATAVVLIVLPKIFSSGGSLTTFCLIGISIIFAL 54 Query: 61 SYNILLGQTGLLSFGHAVQYGLGGFLAVHVMNAVASHNWPIPLPVIPLVGGIGGMAFALL 120 SYNILLGQTG+LSFGHAV YGLGGFLA+H +N + + WPIPLP+IPL+GG+ G+ FA+L Sbjct: 55 SYNILLGQTGMLSFGHAVYYGLGGFLAIHAINIIGGNKWPIPLPLIPLIGGLTGLVFAIL 114 Query: 121 VGWVMTKRAGTVFAMISLGIGELVASSSLILRSVFGGESGITTDRTSLMPMFGWTFGPQI 180 +GWV T+R+GT FAMISLG+ ELVASS+LILR+ FGGE G++ +RT L +F W+FGPQI Sbjct: 115 LGWVSTQRSGTAFAMISLGVAELVASSALILRTFFGGEGGVSANRTKLFRLFDWSFGPQI 174 Query: 181 QVYYLIAFWVMVSAIAMYALTRTPLGRICNAVRDNPERVEFIGYDPHVVRYLAYMFAGFF 240 Q+YYL+A W ++ IAMYALTRTP GR+CNAVRDNPERV+F+GYDPHVVRY+A+ FAGFF Sbjct: 175 QIYYLVAAWTLLCMIAMYALTRTPWGRMCNAVRDNPERVQFVGYDPHVVRYIAFCFAGFF 234 Query: 241 AGIAGGLTAINFEIANSAYLGATQSGLVLFSAFIGGTAYFFGPILGAILVTYLQLGLTSV 300 AGIAG L AINFEIANSAYLGA QSG VLFS +IGG +F GP++GAI VT+L LGL+ + Sbjct: 235 AGIAGALAAINFEIANSAYLGAVQSGTVLFSTYIGGVGFFIGPVVGAIFVTFLSLGLSDL 294 Query: 301 TSVWQLYFGIIFIGIVMFAPGGIAGILMKHRPLIRAGTLSTVIPSYLVAAIPTLALALGV 360 TSVWQLYFG+ FI +V FAPGGI G+LM HRPLIR GTL VIPSYLVA +PTLAL +G+ Sbjct: 295 TSVWQLYFGLFFILVVAFAPGGITGLLMMHRPLIRGGTLGKVIPSYLVAIVPTLALLIGL 354 Query: 361 ILTIETVAR---FSGGEP-INLLGIPFVATAPTTWATAAVLLVGGFLVARITWRRVAEAW 416 +L IE++ S +P I GIPF A++P TWA + +L+VGGF VAR+TW+RVA AW Sbjct: 355 VLAIESIVHHTMHSTEDPNIKAFGIPFNASSPITWAVSLILIVGGFFVARMTWKRVAAAW 414 Query: 417 DRAATVARDR 426 D A TVAR + Sbjct: 415 DEALTVARAK 424