BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0012.p (315 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004110578.1| inner-membrane translocator [Rhodopseudomona... 508 e-142 ref|YP_568717.1| inner-membrane translocator [Rhodopseudomonas p... 507 e-142 ref|YP_485194.1| inner-membrane translocator [Rhodopseudomonas p... 506 e-141 ref|ZP_08630812.1| high-affinity branched-chain amino acid trans... 503 e-140 ref|NP_949371.1| inner-membrane translocator [Rhodopseudomonas p... 500 e-139 >ref|YP_004110578.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] gb|ADU45845.1| inner-membrane translocator [Rhodopseudomonas palustris DX-1] Length = 315 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 257/313 (82%), Positives = 292/313 (93%) Query: 3 ELIVISTLNGVLFGMLLFLLSSGLTVIFSMMGVLNFAHASFYMLGAFFGFQLTRWIGFWP 62 ELIVISTLNGVL+GMLLFL++SGLTVIFSM+GVLNFAHASFYMLGAFFG+Q++RW GFWP Sbjct: 3 ELIVISTLNGVLYGMLLFLMASGLTVIFSMLGVLNFAHASFYMLGAFFGYQISRWTGFWP 62 Query: 63 ALVLAPLLVGAVGMAVERYGLRNTHKHGHVAELLLTFGLAFAIEEIVSMIWGKSPVDYRV 122 AL++APLL GA+G AVER+GLR H++GHVAELL TFGLAFAIEE+VS+IWGK PVDYRV Sbjct: 63 ALIVAPLLAGAIGAAVERFGLRRVHRNGHVAELLFTFGLAFAIEEVVSIIWGKVPVDYRV 122 Query: 123 PAALDFPAFTVFSTNYPAYKIFMLVISVVIFIALLVTLKKTRVGLIVQAALTHPSMVGHL 182 PA LDFPAFT+FSTNYPAYK+FML +S+VIF+ LLV LKKTR+GLIVQAALTHP MV HL Sbjct: 123 PALLDFPAFTIFSTNYPAYKMFMLAVSIVIFVGLLVVLKKTRIGLIVQAALTHPHMVAHL 182 Query: 183 GHNVGRVFMLVFGVGSALAGLAGVIAGPSLVTQSDMAALLGPILFVVIVFGGLGSLPGAF 242 GHNV R+FMLVFGVG+ALA +AGVIAGPSLVTQS+MAALLGPILFVV+V GGLGSLPGAF Sbjct: 183 GHNVERIFMLVFGVGTALAAVAGVIAGPSLVTQSNMAALLGPILFVVVVVGGLGSLPGAF 242 Query: 243 IASLLIGLIQTFAVALNGSLASVFGPLDPSLGPSPLTDIWNVTIAQIAPILPYVLLVLVL 302 IASLLIGL+QTFAV++NGSLASVFGPL P L + L+DIWNVTIAQIAPI+PY+LLVL+L Sbjct: 243 IASLLIGLLQTFAVSVNGSLASVFGPLGPDLAQTWLSDIWNVTIAQIAPIMPYLLLVLIL 302 Query: 303 IFRPMGLLGTRES 315 IFRPMGLLGTRE+ Sbjct: 303 IFRPMGLLGTRET 315 >ref|YP_568717.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] gb|ABE38816.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5] Length = 315 Score = 507 bits (1306), Expect = e-142, Method: Compositional matrix adjust. Identities = 259/313 (82%), Positives = 290/313 (92%) Query: 3 ELIVISTLNGVLFGMLLFLLSSGLTVIFSMMGVLNFAHASFYMLGAFFGFQLTRWIGFWP 62 ELIVISTLNGVLFGMLLFL++SGLTVIFSM+GVLNFAHASFYMLGAFFGFQ++RW GFWP Sbjct: 3 ELIVISTLNGVLFGMLLFLMASGLTVIFSMLGVLNFAHASFYMLGAFFGFQISRWFGFWP 62 Query: 63 ALVLAPLLVGAVGMAVERYGLRNTHKHGHVAELLLTFGLAFAIEEIVSMIWGKSPVDYRV 122 AL+ APLL GA+G AVER+GLR H++GHVAELL TFGLAFAIEEIV +IWGKSPVD+R Sbjct: 63 ALLFAPLLAGAIGAAVERFGLRRVHRNGHVAELLFTFGLAFAIEEIVQIIWGKSPVDFRP 122 Query: 123 PAALDFPAFTVFSTNYPAYKIFMLVISVVIFIALLVTLKKTRVGLIVQAALTHPSMVGHL 182 PA LDFPAFT+FSTNYPAYK+FML +S+VIFI LL+ LKKTRVGLIVQAALTHP MVGHL Sbjct: 123 PALLDFPAFTIFSTNYPAYKMFMLAVSIVIFIGLLLVLKKTRVGLIVQAALTHPHMVGHL 182 Query: 183 GHNVGRVFMLVFGVGSALAGLAGVIAGPSLVTQSDMAALLGPILFVVIVFGGLGSLPGAF 242 GHNV R+FMLVFGVG+ALA +AGVIAGPSLVTQS+MA LLGPILFVV+V GGLGSLPGAF Sbjct: 183 GHNVERIFMLVFGVGTALAAVAGVIAGPSLVTQSNMAGLLGPILFVVVVVGGLGSLPGAF 242 Query: 243 IASLLIGLIQTFAVALNGSLASVFGPLDPSLGPSPLTDIWNVTIAQIAPILPYVLLVLVL 302 IASLLIGL+QTFAV++NGSLASVFGPL P L S L+DIWNVT+AQIAPI+PY+LLVL+L Sbjct: 243 IASLLIGLVQTFAVSINGSLASVFGPLGPDLAQSWLSDIWNVTVAQIAPIMPYLLLVLIL 302 Query: 303 IFRPMGLLGTRES 315 IFRPMGLLGTRE+ Sbjct: 303 IFRPMGLLGTRET 315 >ref|YP_485194.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] gb|ABD06283.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2] Length = 315 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 257/313 (82%), Positives = 291/313 (92%) Query: 3 ELIVISTLNGVLFGMLLFLLSSGLTVIFSMMGVLNFAHASFYMLGAFFGFQLTRWIGFWP 62 EL+VISTLNGVL+GMLLFL++SGLTVIFSM+GVLNFAHASFYMLGAFFGFQ++RW GFWP Sbjct: 3 ELVVISTLNGVLYGMLLFLMASGLTVIFSMLGVLNFAHASFYMLGAFFGFQISRWFGFWP 62 Query: 63 ALVLAPLLVGAVGMAVERYGLRNTHKHGHVAELLLTFGLAFAIEEIVSMIWGKSPVDYRV 122 AL+ APLL GA+G AVER+GLR H++GHVAELL TFGLAFAIEEIVS+IWGK PVD+R Sbjct: 63 ALIFAPLLAGAIGAAVERFGLRRVHRNGHVAELLFTFGLAFAIEEIVSIIWGKVPVDFRP 122 Query: 123 PAALDFPAFTVFSTNYPAYKIFMLVISVVIFIALLVTLKKTRVGLIVQAALTHPSMVGHL 182 PA LDFPAFT+FSTNYPAYK+FML IS+VIFI LL+ LK+TR+GLIVQAALTHP MVGHL Sbjct: 123 PALLDFPAFTIFSTNYPAYKMFMLAISIVIFIGLLLVLKRTRIGLIVQAALTHPHMVGHL 182 Query: 183 GHNVGRVFMLVFGVGSALAGLAGVIAGPSLVTQSDMAALLGPILFVVIVFGGLGSLPGAF 242 GHNV R+FMLVFGVG+ALA +AGVIAGPSLVTQS+MAA+LGPILFVV+V GGLGSLPGAF Sbjct: 183 GHNVERIFMLVFGVGTALAAVAGVIAGPSLVTQSNMAAMLGPILFVVVVVGGLGSLPGAF 242 Query: 243 IASLLIGLIQTFAVALNGSLASVFGPLDPSLGPSPLTDIWNVTIAQIAPILPYVLLVLVL 302 IASLLIGL+QTFAV++NGSLASVFGPL P L S L+DIWNVTIAQIAPI+PY+LLVL+L Sbjct: 243 IASLLIGLVQTFAVSVNGSLASVFGPLGPDLAQSWLSDIWNVTIAQIAPIMPYLLLVLIL 302 Query: 303 IFRPMGLLGTRES 315 IFRPMGLLGTRE+ Sbjct: 303 IFRPMGLLGTRET 315 >ref|ZP_08630812.1| high-affinity branched-chain amino acid transport system permease protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06344.1| high-affinity branched-chain amino acid transport system permease protein [Bradyrhizobiaceae bacterium SG-6C] Length = 315 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 252/313 (80%), Positives = 290/313 (92%) Query: 3 ELIVISTLNGVLFGMLLFLLSSGLTVIFSMMGVLNFAHASFYMLGAFFGFQLTRWIGFWP 62 ELIVISTLNGVLFGMLLFL++SGLTVIFSM+GVLNFAHASFYMLGAFFG+Q+ W GFWP Sbjct: 3 ELIVISTLNGVLFGMLLFLMASGLTVIFSMLGVLNFAHASFYMLGAFFGYQIAHWFGFWP 62 Query: 63 ALVLAPLLVGAVGMAVERYGLRNTHKHGHVAELLLTFGLAFAIEEIVSMIWGKSPVDYRV 122 ALV+AP+L G +G VERYGLR HK+GHVAELL TFGLAFAIEEIV +IWGKSP+D+RV Sbjct: 63 ALVVAPILAGIIGAGVERYGLRRVHKNGHVAELLFTFGLAFAIEEIVQIIWGKSPLDFRV 122 Query: 123 PAALDFPAFTVFSTNYPAYKIFMLVISVVIFIALLVTLKKTRVGLIVQAALTHPSMVGHL 182 PA+LDFPAFT+FSTNYPAYK+FML +S+VIF+ LLV LK+TR+GLIVQAALTHP MVGHL Sbjct: 123 PASLDFPAFTIFSTNYPAYKMFMLAVSIVIFVGLLVVLKRTRIGLIVQAALTHPHMVGHL 182 Query: 183 GHNVGRVFMLVFGVGSALAGLAGVIAGPSLVTQSDMAALLGPILFVVIVFGGLGSLPGAF 242 GHNVGR+FMLVFGVG+ALA +AGVIAGP+LVTQS+MAALLGPILFVV+V GGLGSLPGAF Sbjct: 183 GHNVGRIFMLVFGVGTALAAVAGVIAGPALVTQSNMAALLGPILFVVVVVGGLGSLPGAF 242 Query: 243 IASLLIGLIQTFAVALNGSLASVFGPLDPSLGPSPLTDIWNVTIAQIAPILPYVLLVLVL 302 IASLLIGL+QTFAV++NGSL+ +FGPL P+ + ++DIWNVTIAQIAPI+PYVLLVL+L Sbjct: 243 IASLLIGLLQTFAVSMNGSLSEIFGPLSPAWAATWVSDIWNVTIAQIAPIMPYVLLVLIL 302 Query: 303 IFRPMGLLGTRES 315 IFRPMGLLGTRE+ Sbjct: 303 IFRPMGLLGTRET 315 >ref|NP_949371.1| inner-membrane translocator [Rhodopseudomonas palustris CGA009] ref|YP_001993534.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] emb|CAE29476.1| possible ABC transport system permease protein [Rhodopseudomonas palustris CGA009] gb|ACF03059.1| inner-membrane translocator [Rhodopseudomonas palustris TIE-1] Length = 315 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 253/313 (80%), Positives = 288/313 (92%) Query: 3 ELIVISTLNGVLFGMLLFLLSSGLTVIFSMMGVLNFAHASFYMLGAFFGFQLTRWIGFWP 62 ELIVISTLNGVL+GMLLFL++SGLTVIFSM+GVLNFAHASFYMLGAFFG+Q++RW GFWP Sbjct: 3 ELIVISTLNGVLYGMLLFLMASGLTVIFSMLGVLNFAHASFYMLGAFFGYQISRWTGFWP 62 Query: 63 ALVLAPLLVGAVGMAVERYGLRNTHKHGHVAELLLTFGLAFAIEEIVSMIWGKSPVDYRV 122 AL++APLL GA+G AVER+GLR H++GHVAELL TFGLAFAIEE+VS+IWGK PVDYR Sbjct: 63 ALLIAPLLAGAIGAAVERFGLRRVHRNGHVAELLFTFGLAFAIEEVVSIIWGKVPVDYRT 122 Query: 123 PAALDFPAFTVFSTNYPAYKIFMLVISVVIFIALLVTLKKTRVGLIVQAALTHPSMVGHL 182 PA LDFPAFT+FSTNYPAYK+FML +SVVIF+ LLV LKKTR+GLIVQAALTHP MV HL Sbjct: 123 PALLDFPAFTIFSTNYPAYKMFMLAVSVVIFVGLLVVLKKTRIGLIVQAALTHPHMVAHL 182 Query: 183 GHNVGRVFMLVFGVGSALAGLAGVIAGPSLVTQSDMAALLGPILFVVIVFGGLGSLPGAF 242 GHNV R+FMLVFGVG+ALA +AGVIAGPSLVTQS+MA+LLGPILFVV+V GGLGSLPGAF Sbjct: 183 GHNVERIFMLVFGVGTALAAVAGVIAGPSLVTQSNMASLLGPILFVVVVVGGLGSLPGAF 242 Query: 243 IASLLIGLIQTFAVALNGSLASVFGPLDPSLGPSPLTDIWNVTIAQIAPILPYVLLVLVL 302 IASLLIGL+QTFAV++N S A++FGPL P L S L DIWNVTIAQIAPI+PY+LLVL+L Sbjct: 243 IASLLIGLLQTFAVSINASPATLFGPLGPDLAASWLNDIWNVTIAQIAPIMPYLLLVLIL 302 Query: 303 IFRPMGLLGTRES 315 IFRPMGLLGTRE+ Sbjct: 303 IFRPMGLLGTRET 315