BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0274.p         (151 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767486.1| transcriptional regulator [Bradyrhizobium japon...   248   3e-64
ref|YP_001412350.1| regulatory protein ArsR [Parvibaculum lavame...   169   1e-40
ref|ZP_08628492.1| transcriptional regulator, ArsR family [Brady...   160   6e-38
ref|YP_001682669.1| MarR family transcriptional regulator [Caulo...   147   4e-34
ref|YP_003910601.1| regulatory protein ArsR [Burkholderia sp. CC...   141   3e-32

>ref|NP_767486.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46111.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
           110]
          Length = 179

 Score =  248 bits (632), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 127/154 (82%), Positives = 134/154 (87%), Gaps = 9/154 (5%)

Query: 1   MVKYQDETLDRTFAALSDPTRRALLARLGEQDSLSVSELAQPFAISLPAIMKHLDVLTDA 60
           MVKYQDETLDRTFAALSDPTRRALLARLGEQDSLSVSELA PF +SLPAIMKHLDVLTDA
Sbjct: 22  MVKYQDETLDRTFAALSDPTRRALLARLGEQDSLSVSELAAPFPVSLPAIMKHLDVLTDA 81

Query: 61  GLVAREKTGRTVACRLTARPMEQAMNWLNRYAQFWSDNLDRLAAFVEEDPWQTNPQSPPM 120
           GL+ REKTGRTV+CRLTA+PMEQAMNWLNRYAQFWSDNLDRLAAFVEE+ W T P S P+
Sbjct: 82  GLIVREKTGRTVSCRLTAQPMEQAMNWLNRYAQFWSDNLDRLAAFVEEETWPTQP-STPI 140

Query: 121 PASPRA--------QASPSRGGSARGRKKSTPRG 146
           PA+P A        QAS SR GSARGRKKSTP G
Sbjct: 141 PAAPSARQNVQANVQASRSRAGSARGRKKSTPPG 174


>ref|YP_001412350.1| regulatory protein ArsR [Parvibaculum lavamentivorans DS-1]
 gb|ABS62693.1| regulatory protein ArsR [Parvibaculum lavamentivorans DS-1]
          Length = 142

 Score =  169 bits (428), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 79/107 (73%), Positives = 94/107 (87%)

Query: 1   MVKYQDETLDRTFAALSDPTRRALLARLGEQDSLSVSELAQPFAISLPAIMKHLDVLTDA 60
           MVKYQ+  LDRTFAAL+DPTRRALLARL  ++S+SVSELA+PFA+SLPA+MKHLDVL+DA
Sbjct: 13  MVKYQEPILDRTFAALADPTRRALLARLEGEESVSVSELARPFAMSLPAVMKHLDVLSDA 72

Query: 61  GLVAREKTGRTVACRLTARPMEQAMNWLNRYAQFWSDNLDRLAAFVE 107
           GLV + K GRTV+C L A PM +AM WLNRY +FWSDNLDRLAAF++
Sbjct: 73  GLVEKRKVGRTVSCSLNAEPMREAMEWLNRYRRFWSDNLDRLAAFLD 119


>ref|ZP_08628492.1| transcriptional regulator, ArsR family [Bradyrhizobiaceae bacterium
           SG-6C]
 gb|EGP08816.1| transcriptional regulator, ArsR family [Bradyrhizobiaceae bacterium
           SG-6C]
          Length = 149

 Score =  160 bits (405), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 94/118 (79%), Gaps = 3/118 (2%)

Query: 1   MVKYQDETLDRTFAALSDPTRRALLARLGEQDSLSVSELAQPFAISLPAIMKHLDVLTDA 60
           MV Y  + L+R FAA++DPTRRALLA L  +  ++VSELA+PFA+SLPA+MKHLDVL+DA
Sbjct: 1   MVYYSSDHLNRVFAAVADPTRRALLAELEGRGDITVSELAKPFAMSLPAVMKHLDVLSDA 60

Query: 61  GLVAREKTGRTVACRLTARPMEQAMNWLNRYAQFWSDNLDRLAAFVEED---PWQTNP 115
           GL+ + KTGRTV CRLTA PMEQAM WL RY +FW+  LDRLAAFVE+D   P Q +P
Sbjct: 61  GLITKTKTGRTVTCRLTAAPMEQAMEWLGRYQRFWTAQLDRLAAFVEKDLCSPSQASP 118


>ref|YP_001682669.1| MarR family transcriptional regulator [Caulobacter sp. K31]
 gb|ABZ70171.1| transcriptional regulator, MarR family [Caulobacter sp. K31]
          Length = 112

 Score =  147 bits (372), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 68/109 (62%), Positives = 84/109 (77%)

Query: 1   MVKYQDETLDRTFAALSDPTRRALLARLGEQDSLSVSELAQPFAISLPAIMKHLDVLTDA 60
           MVKYQ   +DRTF AL+DPTRR +L RL ++  LSVSELA+P ++ LP +MKHLDVL+DA
Sbjct: 1   MVKYQASAIDRTFGALADPTRRHVLLRLKDEPGLSVSELARPLSLKLPGMMKHLDVLSDA 60

Query: 61  GLVAREKTGRTVACRLTARPMEQAMNWLNRYAQFWSDNLDRLAAFVEED 109
           GL+ R KTGRTV+ RL+  PM +AM WL RY   W+ +LDRL AFVEED
Sbjct: 61  GLITRTKTGRTVSVRLSVEPMREAMAWLERYESLWTVSLDRLVAFVEED 109


>ref|YP_003910601.1| regulatory protein ArsR [Burkholderia sp. CCGE1003]
 gb|ADN61310.1| regulatory protein ArsR [Burkholderia sp. CCGE1003]
          Length = 110

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/107 (64%), Positives = 84/107 (78%)

Query: 1   MVKYQDETLDRTFAALSDPTRRALLARLGEQDSLSVSELAQPFAISLPAIMKHLDVLTDA 60
           MVK     LDRTF+AL+DPTRRA+LARL +   LSV+E+A+P  I LPA+MKHLDVL++A
Sbjct: 1   MVKCPVSQLDRTFSALTDPTRRAILARLEQVPQLSVTEIARPLPIKLPAVMKHLDVLSEA 60

Query: 61  GLVAREKTGRTVACRLTARPMEQAMNWLNRYAQFWSDNLDRLAAFVE 107
           GL+ R K GRTV+ +L A PME+AM WL RY +FWS NLDRLA FVE
Sbjct: 61  GLITRAKHGRTVSVQLVAGPMEEAMAWLRRYERFWSANLDRLADFVE 107