BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0270.p (205 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767490.1| hypothetical protein blr0850 [Bradyrhizobium ja... 311 5e-83 ref|YP_001208923.1| hypothetical protein BRADO7126 [Bradyrhizobi... 306 1e-81 ref|YP_567200.1| hypothetical protein RPD_0059 [Rhodopseudomonas... 291 5e-77 ref|YP_001243589.1| hypothetical protein BBta_7858 [Bradyrhizobi... 285 2e-75 ref|YP_486303.1| hypothetical protein RPB_2690 [Rhodopseudomonas... 280 1e-73 >ref|NP_767490.1| hypothetical protein blr0850 [Bradyrhizobium japonicum USDA 110] dbj|BAC46115.1| blr0850 [Bradyrhizobium japonicum USDA 110] Length = 296 Score = 311 bits (796), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 149/205 (72%), Positives = 177/205 (86%) Query: 1 MRDLDKALADILAIRSQIAAGTAFRGYGPATVAATSGIALVTALAQYLWLADPTAHPIAF 60 MRDLDKALADI+AIRSQIAAGTAFRGYGPAT+ AT G+ALVTA+ Q+ L DPT P+ F Sbjct: 92 MRDLDKALADIVAIRSQIAAGTAFRGYGPATMVATGGVALVTAILQFWLLGDPTGEPLGF 151 Query: 61 LAGWAAAALVSAVLIWIEMQARSRRHHSGLADAMVQQAIEQFVPAVIAGVLLAVLQWKFA 120 GW AA+VS ++I IEM+ARSRRHHSGLADAM+ QA+EQF+PA +AGVLLAV+ WKFA Sbjct: 152 FFGWFIAAVVSGLMIGIEMRARSRRHHSGLADAMIHQAVEQFLPAGVAGVLLAVVMWKFA 211 Query: 121 PETLWMLPGLWQVLVSLGVFASVRLLPRTIALGGAWYFLSGFTVLLIASQSHALSPWTMG 180 ETLW+LPGLWQ+LVSLG+FAS+R LPRT+AL GAWYF+SGF V+++ASQ+H LSPWTMG Sbjct: 212 SETLWLLPGLWQILVSLGIFASIRSLPRTVALAGAWYFVSGFAVVVLASQTHTLSPWTMG 271 Query: 181 LPFAIGQLLLAALLYFASGGHDAED 205 LPF IGQ ++A +LYFASG HD ED Sbjct: 272 LPFVIGQSVMAGILYFASGDHDVED 296 >ref|YP_001208923.1| hypothetical protein BRADO7126 [Bradyrhizobium sp. ORS 278] emb|CAL80708.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 205 Score = 306 bits (783), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 149/205 (72%), Positives = 177/205 (86%) Query: 1 MRDLDKALADILAIRSQIAAGTAFRGYGPATVAATSGIALVTALAQYLWLADPTAHPIAF 60 MRDLDKALADI+AIRSQ+AAGTAFRGYGPAT+A T+ +AL+TAL Q L DPTA P+ F Sbjct: 1 MRDLDKALADIIAIRSQLAAGTAFRGYGPATMAGTAAVALITALVQQFVLLDPTAEPLVF 60 Query: 61 LAGWAAAALVSAVLIWIEMQARSRRHHSGLADAMVQQAIEQFVPAVIAGVLLAVLQWKFA 120 L GWAAAA VS ++IW+EM+ARS+RHHSGLADAM+ QA+EQF+PA IAGVLLAVL WKFA Sbjct: 61 LLGWAAAACVSLIIIWVEMRARSQRHHSGLADAMIHQAVEQFLPAGIAGVLLAVLLWKFA 120 Query: 121 PETLWMLPGLWQVLVSLGVFASVRLLPRTIALGGAWYFLSGFTVLLIASQSHALSPWTMG 180 PE LW LPGLWQ+L+SLGVFASVR LPR++AL GA+YF++GF VLL+ S +H LSPWTMG Sbjct: 121 PEALWTLPGLWQILMSLGVFASVRSLPRSVALAGAFYFIAGFAVLLLGSLTHQLSPWTMG 180 Query: 181 LPFAIGQLLLAALLYFASGGHDAED 205 LPFA+GQ L+A +LYFA+G D ED Sbjct: 181 LPFAVGQALMAGILYFATGDSDVED 205 >ref|YP_567200.1| hypothetical protein RPD_0059 [Rhodopseudomonas palustris BisB5] gb|ABE37299.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 205 Score = 291 bits (744), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 147/204 (72%), Positives = 177/204 (86%) Query: 1 MRDLDKALADILAIRSQIAAGTAFRGYGPATVAATSGIALVTALAQYLWLADPTAHPIAF 60 MRDLDKALADI+AIRSQIAAGTAFRGYGP +AAT+G+AL+TA+ Q LWL +P +HP++F Sbjct: 1 MRDLDKALADIIAIRSQIAAGTAFRGYGPTALAATAGLALITAVLQSLWLDEPDSHPLSF 60 Query: 61 LAGWAAAALVSAVLIWIEMQARSRRHHSGLADAMVQQAIEQFVPAVIAGVLLAVLQWKFA 120 +GWAA A +S +IWIEM+ARS RHHSGLADAM+ QAIEQF+PA +AG LLA+ WKFA Sbjct: 61 FSGWAATACLSGAIIWIEMRARSHRHHSGLADAMIHQAIEQFLPAGVAGALLALTLWKFA 120 Query: 121 PETLWMLPGLWQVLVSLGVFASVRLLPRTIALGGAWYFLSGFTVLLIASQSHALSPWTMG 180 PETLWMLPGLWQ+LVSLG+FASVR LPR++A GAWYF++GF VL +AS +HALSPWTMG Sbjct: 121 PETLWMLPGLWQILVSLGIFASVRSLPRSVAFVGAWYFVAGFAVLALASANHALSPWTMG 180 Query: 181 LPFAIGQLLLAALLYFASGGHDAE 204 LPF +GQLL+AA ++FASG DAE Sbjct: 181 LPFMVGQLLMAAFVHFASGEIDAE 204 >ref|YP_001243589.1| hypothetical protein BBta_7858 [Bradyrhizobium sp. BTAi1] gb|ABQ39683.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 205 Score = 285 bits (730), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 152/205 (74%), Positives = 175/205 (85%) Query: 1 MRDLDKALADILAIRSQIAAGTAFRGYGPATVAATSGIALVTALAQYLWLADPTAHPIAF 60 MRDLDKALADI+AIRSQ+AAGTAFRGYGPAT+AAT+ +AL TA Q + L D A P+ F Sbjct: 1 MRDLDKALADIIAIRSQLAAGTAFRGYGPATMAATAVVALATAAIQQVVLRDSAADPLLF 60 Query: 61 LAGWAAAALVSAVLIWIEMQARSRRHHSGLADAMVQQAIEQFVPAVIAGVLLAVLQWKFA 120 L GWAAAA +S +IW+EM+ARSRRHHSGLADAM+ QA+EQF+PA IAGVLLAVL WKFA Sbjct: 61 LLGWAAAACISLSMIWVEMRARSRRHHSGLADAMIHQAVEQFLPAGIAGVLLAVLLWKFA 120 Query: 121 PETLWMLPGLWQVLVSLGVFASVRLLPRTIALGGAWYFLSGFTVLLIASQSHALSPWTMG 180 PE LWMLPGLWQ+L SLGVFASVR LPRT+AL GA+YFL+GF VLL+ S SHALSPWTMG Sbjct: 121 PEALWMLPGLWQILTSLGVFASVRSLPRTVALAGAFYFLAGFAVLLLGSVSHALSPWTMG 180 Query: 181 LPFAIGQLLLAALLYFASGGHDAED 205 LPFA+GQ L+A +LYFA+G D ED Sbjct: 181 LPFAVGQALMAGILYFATGDSDVED 205 >ref|YP_486303.1| hypothetical protein RPB_2690 [Rhodopseudomonas palustris HaA2] gb|ABD07392.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 205 Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 144/204 (70%), Positives = 173/204 (84%) Query: 1 MRDLDKALADILAIRSQIAAGTAFRGYGPATVAATSGIALVTALAQYLWLADPTAHPIAF 60 M DLDKALADI AIRSQIAAGTAFRGYGPA +A T+G+ALVT +AQ LWL DP +H +AF Sbjct: 1 MSDLDKALADIFAIRSQIAAGTAFRGYGPAALAGTAGLALVTTIAQSLWLDDPNSHLLAF 60 Query: 61 LAGWAAAALVSAVLIWIEMQARSRRHHSGLADAMVQQAIEQFVPAVIAGVLLAVLQWKFA 120 GW A AL+SA++IW+EM+ARSRRHHSGLADAM+ QA+EQFVPA +AG LL V WKFA Sbjct: 61 FLGWIATALLSAMMIWLEMRARSRRHHSGLADAMIHQAVEQFVPAGVAGALLGVTLWKFA 120 Query: 121 PETLWMLPGLWQVLVSLGVFASVRLLPRTIALGGAWYFLSGFTVLLIASQSHALSPWTMG 180 P TLWMLPGLWQ+LV LG+FASVR+LPR +AL GAWYF++GF+VL ++S+S A+SP MG Sbjct: 121 PGTLWMLPGLWQILVGLGIFASVRMLPRPVALVGAWYFVAGFSVLALSSESAAVSPLAMG 180 Query: 181 LPFAIGQLLLAALLYFASGGHDAE 204 +PF +GQLL+AA+L FASG DAE Sbjct: 181 VPFVVGQLLMAAVLRFASGDDDAE 204