BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0263.p (407 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001205565.1| threonine dehydratase [Bradyrhizobium sp. OR... 618 e-175 ref|YP_001239959.1| threonine dehydratase [Bradyrhizobium sp. BT... 585 e-165 ref|NP_771371.1| threonine dehydratase [Bradyrhizobium japonicum... 560 e-157 ref|YP_004676102.1| Threonine dehydratase [Hyphomicrobium sp. MC... 503 e-140 ref|YP_003755980.1| threonine dehydratase [Hyphomicrobium denitr... 491 e-137 >ref|YP_001205565.1| threonine dehydratase [Bradyrhizobium sp. ORS 278] emb|CAL77339.1| putative Threonine ammonia-lyase [Bradyrhizobium sp. ORS 278] Length = 412 Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust. Identities = 315/398 (79%), Positives = 355/398 (89%) Query: 10 ITLADIRRAADVIRDAVMVTACNESRTLGEICGCRLFLKFENLQFTATFKERGALNRLQA 69 +T+ D+R AAD I AV+ TACN+SRTLGEICGC ++LKFENLQFT++FKERGALNRL A Sbjct: 15 VTINDVRAAADTISGAVLTTACNQSRTLGEICGCNIWLKFENLQFTSSFKERGALNRLNA 74 Query: 70 LSPEERKRGVIAMSAGNHAQGVAYHAKRLGIPATIVMPIGTPMVKIENTRRHGAEVIITG 129 LS E+R+RGVIAMSAGNHAQGVAY+A+RLGIPATIVMP+GTPMVK+ENTRRHGAEV+I+G Sbjct: 75 LSSEQRERGVIAMSAGNHAQGVAYNARRLGIPATIVMPVGTPMVKVENTRRHGAEVVISG 134 Query: 130 QTLEECFAFVGSHAAQKGLILIHPYDDPLIIAGQGTIGLEMLAAVPELDILVVPIGGGGL 189 TLEE F H A +G+ +IHPYDDPLIIAGQGT+ LEMLA VPELD LVVPIGGGGL Sbjct: 135 ATLEEAGTFAREHGAARGMTMIHPYDDPLIIAGQGTVALEMLAVVPELDTLVVPIGGGGL 194 Query: 190 ISGIATAAKALKPSIQVVGVQAQLYPSMYNAVKGEQLPMRGDTLAEGIAVKAPGQITTKI 249 ISGIA AA+ALKPS+++VGVQA+LYPSMYNA+ G LPMRGDTLAEGIAVK+PG+ITT+I Sbjct: 195 ISGIAVAARALKPSMRIVGVQAELYPSMYNAISGRSLPMRGDTLAEGIAVKSPGRITTEI 254 Query: 250 VRQLVDDIILVSEDQIERAVATLISIEKTVVEGAGAAGLAAVLAAPARFAGHNVGLVLTG 309 +R LVD+I+LV+E QIERA+ATLISIEKTVVEGAGA GLAAVLA +FAG NVGLVL G Sbjct: 255 IRHLVDEILLVTEPQIERALATLISIEKTVVEGAGAVGLAAVLAHQDQFAGRNVGLVLCG 314 Query: 310 GNIDTRLIASVLTRELAREGRLTQLALDIVDRPGQLAAVSILLADAGANIIEVSHQRTFS 369 GNIDTRLIASVLTRELAREGRLTQL++DIVDRPGQLAAVS LLADAGANIIEVSHQRTFS Sbjct: 315 GNIDTRLIASVLTRELAREGRLTQLSIDIVDRPGQLAAVSALLADAGANIIEVSHQRTFS 374 Query: 370 DLPAKATLLELVIETRDRAHLEEVLARLGAEGFAVRET 407 DLPAKATLLELVIETRD+AHL EV+ RL A F R T Sbjct: 375 DLPAKATLLELVIETRDQAHLNEVMDRLVAADFKARCT 412 >ref|YP_001239959.1| threonine dehydratase [Bradyrhizobium sp. BTAi1] gb|ABQ36053.1| L-threonine ammonia-lyase [Bradyrhizobium sp. BTAi1] Length = 412 Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust. Identities = 312/398 (78%), Positives = 353/398 (88%) Query: 10 ITLADIRRAADVIRDAVMVTACNESRTLGEICGCRLFLKFENLQFTATFKERGALNRLQA 69 +TL D+R AA I+ V+ TACN+SRTLGEIC C L+LKFENLQFT++FK+RGALNRL A Sbjct: 15 VTLDDVRAAAATIQGVVLETACNQSRTLGEICKCNLWLKFENLQFTSSFKDRGALNRLNA 74 Query: 70 LSPEERKRGVIAMSAGNHAQGVAYHAKRLGIPATIVMPIGTPMVKIENTRRHGAEVIITG 129 L+ E+R RGVIAMSAGNHAQGVAY+A+RLGIPATIVMP+GTPMVK+ENTRRHGAEVII+G Sbjct: 75 LTAEQRPRGVIAMSAGNHAQGVAYNARRLGIPATIVMPVGTPMVKVENTRRHGAEVIISG 134 Query: 130 QTLEECFAFVGSHAAQKGLILIHPYDDPLIIAGQGTIGLEMLAAVPELDILVVPIGGGGL 189 LEE AF SH A G+ LIHPYDDPLIIAGQGT+ LEMLAAVPELD LVVPIGGGGL Sbjct: 135 TNLEEAGAFARSHGAAHGMTLIHPYDDPLIIAGQGTVALEMLAAVPELDTLVVPIGGGGL 194 Query: 190 ISGIATAAKALKPSIQVVGVQAQLYPSMYNAVKGEQLPMRGDTLAEGIAVKAPGQITTKI 249 ISGIA A+ALKPS++++GVQA+LYPSMYNA+ G+ LPMRGDTLAEGIAVK+PG+ITT+I Sbjct: 195 ISGIAVVARALKPSVRIIGVQAELYPSMYNAISGKDLPMRGDTLAEGIAVKSPGRITTEI 254 Query: 250 VRQLVDDIILVSEDQIERAVATLISIEKTVVEGAGAAGLAAVLAAPARFAGHNVGLVLTG 309 +R LVDDI+LV+E QIE+A+ATLISIEKTVVEGAGAAGLAAVLA P FAG +VGLVL+G Sbjct: 255 IRHLVDDILLVTEPQIEQALATLISIEKTVVEGAGAAGLAAVLANPGEFAGRHVGLVLSG 314 Query: 310 GNIDTRLIASVLTRELAREGRLTQLALDIVDRPGQLAAVSILLADAGANIIEVSHQRTFS 369 GNIDTRLIASVLTRELAREGRLTQL +DIVDRPGQLAAVS LL DAGANIIEVSHQRTFS Sbjct: 315 GNIDTRLIASVLTRELAREGRLTQLTIDIVDRPGQLAAVSSLLGDAGANIIEVSHQRTFS 374 Query: 370 DLPAKATLLELVIETRDRAHLEEVLARLGAEGFAVRET 407 LPAKATLLELVIETRD+AHL +V+A+L A F R T Sbjct: 375 VLPAKATLLELVIETRDQAHLNDVMAKLAAANFKARCT 412 >ref|NP_771371.1| threonine dehydratase [Bradyrhizobium japonicum USDA 110] dbj|BAC49996.1| bll4731 [Bradyrhizobium japonicum USDA 110] Length = 414 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 304/394 (77%), Positives = 349/394 (88%) Query: 14 DIRRAADVIRDAVMVTACNESRTLGEICGCRLFLKFENLQFTATFKERGALNRLQALSPE 73 DI+ AA+ IR AV+ T C+ SRTL ICGC ++LKFENLQFT++FKERGALNRL AL+PE Sbjct: 21 DIQAAAETIRGAVVETPCSYSRTLSNICGCDIWLKFENLQFTSSFKERGALNRLTALTPE 80 Query: 74 ERKRGVIAMSAGNHAQGVAYHAKRLGIPATIVMPIGTPMVKIENTRRHGAEVIITGQTLE 133 ER RGVIAMSAGNHAQGVAYHA+RLGIPATIVMP+GTPMVKIENT+ HGAEV++TG TLE Sbjct: 81 ERMRGVIAMSAGNHAQGVAYHARRLGIPATIVMPVGTPMVKIENTKHHGAEVVVTGATLE 140 Query: 134 ECFAFVGSHAAQKGLILIHPYDDPLIIAGQGTIGLEMLAAVPELDILVVPIGGGGLISGI 193 E AF SH G+I +HPYDDPL+IAGQGT+GLEML AVPELD LVVPIGGGGLISGI Sbjct: 141 EAAAFARSHGEAHGMIFVHPYDDPLVIAGQGTVGLEMLKAVPELDTLVVPIGGGGLISGI 200 Query: 194 ATAAKALKPSIQVVGVQAQLYPSMYNAVKGEQLPMRGDTLAEGIAVKAPGQITTKIVRQL 253 AAK++KPS++++GV+A LYPSMYNA+ LP RGDTLAEGIAVK+PG+ITT+IVR+L Sbjct: 201 GIAAKSIKPSLRILGVEAWLYPSMYNAIHDGNLPARGDTLAEGIAVKSPGKITTEIVRRL 260 Query: 254 VDDIILVSEDQIERAVATLISIEKTVVEGAGAAGLAAVLAAPARFAGHNVGLVLTGGNID 313 VDDI LV+E ++ERAVATLISIEKTVVEGAGAAGLAA+++ P+RFAG VGLVL+GGNID Sbjct: 261 VDDIALVNEAELERAVATLISIEKTVVEGAGAAGLAALMSDPSRFAGQKVGLVLSGGNID 320 Query: 314 TRLIASVLTRELAREGRLTQLALDIVDRPGQLAAVSILLADAGANIIEVSHQRTFSDLPA 373 TRLIASVLTRELAREGRLTQL+LDI DRPGQLAAV+ LLA+AGANIIEVSHQRTFSDLPA Sbjct: 321 TRLIASVLTRELAREGRLTQLSLDIPDRPGQLAAVAALLAEAGANIIEVSHQRTFSDLPA 380 Query: 374 KATLLELVIETRDRAHLEEVLARLGAEGFAVRET 407 KATLL+LVIETRD AHL+EV+ARL A G + R T Sbjct: 381 KATLLQLVIETRDSAHLDEVMARLSASGLSARCT 414 >ref|YP_004676102.1| Threonine dehydratase [Hyphomicrobium sp. MC1] emb|CCB65534.1| Threonine dehydratase [Hyphomicrobium sp. MC1] Length = 419 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 256/396 (64%), Positives = 321/396 (81%) Query: 9 AITLADIRRAADVIRDAVMVTACNESRTLGEICGCRLFLKFENLQFTATFKERGALNRLQ 68 ++T D+ RAA+ IR AV+ T SRTL + ++LKFENLQFTA++KERGALN+L Sbjct: 13 SVTYGDVVRAAEAIRGAVVPTRFEPSRTLSTLLNAEIWLKFENLQFTASYKERGALNKLL 72 Query: 69 ALSPEERKRGVIAMSAGNHAQGVAYHAKRLGIPATIVMPIGTPMVKIENTRRHGAEVIIT 128 +LS ER+ GVIAMSAGNHAQGVAYHA RLGIPATIVMP TP +K+ENTR HGAEVI+ Sbjct: 73 SLSDVERQNGVIAMSAGNHAQGVAYHAHRLGIPATIVMPASTPTIKVENTRSHGAEVILE 132 Query: 129 GQTLEECFAFVGSHAAQKGLILIHPYDDPLIIAGQGTIGLEMLAAVPELDILVVPIGGGG 188 GQTLEE +AF ++ A++G+ +HP++DP +IAGQGT+ +EMLA P+LD+L+VPIGGGG Sbjct: 133 GQTLEESYAFAVAYGAERGMTFVHPFNDPAVIAGQGTVAVEMLAVAPDLDVLIVPIGGGG 192 Query: 189 LISGIATAAKALKPSIQVVGVQAQLYPSMYNAVKGEQLPMRGDTLAEGIAVKAPGQITTK 248 LISG+A AAKA+ P I+++GV+AQLYPSM NAVK LP+ GDTLAEGIAVK PG +T + Sbjct: 193 LISGMAVAAKAINPKIKIIGVEAQLYPSMLNAVKHASLPIGGDTLAEGIAVKTPGSLTQE 252 Query: 249 IVRQLVDDIILVSEDQIERAVATLISIEKTVVEGAGAAGLAAVLAAPARFAGHNVGLVLT 308 IV LVDDI+LVSE +ERAV+ LI+IEKTVVEGAGAAGLAA++ A + G +GLVL Sbjct: 253 IVEALVDDILLVSEADLERAVSLLITIEKTVVEGAGAAGLAALIGANRLYKGRKIGLVLC 312 Query: 309 GGNIDTRLIASVLTRELAREGRLTQLALDIVDRPGQLAAVSILLADAGANIIEVSHQRTF 368 GGNIDTRL+ASVLTRELAR+GRL++LA+D+ DRPGQLA V+ ++ GAN++EV HQR F Sbjct: 313 GGNIDTRLLASVLTRELARDGRLSRLAIDLPDRPGQLAKVAGVIGGVGANVVEVYHQRVF 372 Query: 369 SDLPAKATLLELVIETRDRAHLEEVLARLGAEGFAV 404 +D+PAK T L LVIETRDRAHL+ V+A L A G++V Sbjct: 373 TDVPAKGTELHLVIETRDRAHLDLVVAGLKAAGYSV 408 >ref|YP_003755980.1| threonine dehydratase [Hyphomicrobium denitrificans ATCC 51888] gb|ADJ23659.1| threonine dehydratase [Hyphomicrobium denitrificans ATCC 51888] Length = 411 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 256/395 (64%), Positives = 313/395 (79%) Query: 10 ITLADIRRAADVIRDAVMVTACNESRTLGEICGCRLFLKFENLQFTATFKERGALNRLQA 69 +T +D+ RAAD IR A++ T SRTL + ++LKFENLQFTA++KERGALN+L + Sbjct: 7 VTYSDVVRAADAIRGAIIETRFQPSRTLSTLLDAEIWLKFENLQFTASYKERGALNKLLS 66 Query: 70 LSPEERKRGVIAMSAGNHAQGVAYHAKRLGIPATIVMPIGTPMVKIENTRRHGAEVIITG 129 L+ ER GVIAMSAGNHAQGVAYHA RLGIPATIVMP TP +K+ENTR HGA V++ G Sbjct: 67 LTEAERNAGVIAMSAGNHAQGVAYHAHRLGIPATIVMPASTPTIKVENTRGHGATVLLEG 126 Query: 130 QTLEECFAFVGSHAAQKGLILIHPYDDPLIIAGQGTIGLEMLAAVPELDILVVPIGGGGL 189 QTLE+ F + + GL +HP++DP++IAGQGT+ LEML A P+LD L+VPIGGGGL Sbjct: 127 QTLEDASQFAVRYGQEHGLTFVHPFNDPVVIAGQGTVALEMLKATPDLDTLIVPIGGGGL 186 Query: 190 ISGIATAAKALKPSIQVVGVQAQLYPSMYNAVKGEQLPMRGDTLAEGIAVKAPGQITTKI 249 ISG+A AAKA+ P I+VVGV+AQLYPSM NAVK LP+ GDTLAEGIAV PG +T I Sbjct: 187 ISGMAIAAKAINPKIKVVGVEAQLYPSMLNAVKKSSLPVGGDTLAEGIAVTLPGDVTKSI 246 Query: 250 VRQLVDDIILVSEDQIERAVATLISIEKTVVEGAGAAGLAAVLAAPARFAGHNVGLVLTG 309 + +LVDDI+LVSE IERAVA LI+IEKTVVEGAGAAGLAA+LAA + +GLVL G Sbjct: 247 IEELVDDILLVSEADIERAVALLINIEKTVVEGAGAAGLAALLAAKRLYKDRKIGLVLCG 306 Query: 310 GNIDTRLIASVLTRELAREGRLTQLALDIVDRPGQLAAVSILLADAGANIIEVSHQRTFS 369 GNIDTRL+ASVLTRE+AREGRL++L++D+ DRPGQLA VS L+ GANI+EV HQR F+ Sbjct: 307 GNIDTRLLASVLTREMAREGRLSRLSIDLPDRPGQLARVSGLIGGVGANILEVYHQRIFT 366 Query: 370 DLPAKATLLELVIETRDRAHLEEVLARLGAEGFAV 404 D+PAK T L LVIETRDRAHL++V+A L G++V Sbjct: 367 DVPAKGTELNLVIETRDRAHLDQVVAGLKGGGYSV 401