BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0254.p (212 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768734.1| transcriptional regulator [Bradyrhizobium japon... 344 5e-93 ref|YP_001238814.1| GntR family transcriptional regulator [Brady... 320 6e-86 ref|YP_001204485.1| GntR family transcriptional regulator [Brady... 315 3e-84 ref|YP_004614166.1| GntR family transcriptional regulator [Mesor... 222 4e-56 ref|NP_107746.1| transcription regulator [Mesorhizobium loti MAF... 221 6e-56 >ref|NP_768734.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] gb|AAG61069.1|AF322013_188 ID896 [Bradyrhizobium japonicum] dbj|BAC47359.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 211 Score = 344 bits (883), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 168/208 (80%), Positives = 190/208 (91%) Query: 5 GENTTTAGRIAEAIGDRIISGELLPDAPLRQDHVAREFHSSHVPVREAFRQLEAQHLVVA 64 +N T RIA++I +RIISG L P APLRQDHVAREF+SSHVPVREAFR L+AQHLVVA Sbjct: 4 ADNMTMVARIADSIAERIISGALAPGAPLRQDHVAREFNSSHVPVREAFRHLQAQHLVVA 63 Query: 65 VPRRGVRVAPLDTRSVKEIAEMRAALEVVALRNAAPRLTSAHLARIELAMIEGDNAETVQ 124 VPRRGVRVAPLDTRSVKEIAEMRAALEVVALR++ PRLT+AHLA+IELA+IEGDNA+T++ Sbjct: 64 VPRRGVRVAPLDTRSVKEIAEMRAALEVVALRHSGPRLTTAHLAQIELALIEGDNAKTIE 123 Query: 125 DFEMANRAFHHALVAPCAMPRLLASLDGLQLANSRLVFAMARNAGWRPRPSQDHRVILQA 184 +FEMANRAFH ALVAPC MPRLLASLDGLQLANSRLVFAMAR+ GWRPR +QDHR+ILQA Sbjct: 124 EFEMANRAFHQALVAPCGMPRLLASLDGLQLANSRLVFAMARSVGWRPRSNQDHRLILQA 183 Query: 185 LRARNIEQACSLLARHIQTIERLALPAA 212 LR RN++ AC+LL RHIQTIERLALPA+ Sbjct: 184 LRTRNVDHACNLLTRHIQTIERLALPAS 211 >ref|YP_001238814.1| GntR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ34908.1| transcriptional regulator, GntR family [Bradyrhizobium sp. BTAi1] Length = 211 Score = 320 bits (821), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 162/209 (77%), Positives = 177/209 (84%) Query: 4 EGENTTTAGRIAEAIGDRIISGELLPDAPLRQDHVAREFHSSHVPVREAFRQLEAQHLVV 63 + EN TTA RIA+ + +RI+SG L PDAPLRQDH+AREF+SSHVPVREAFRQLEA +LVV Sbjct: 2 QDENLTTAHRIADVLTERIVSGALPPDAPLRQDHIAREFNSSHVPVREAFRQLEALYLVV 61 Query: 64 AVPRRGVRVAPLDTRSVKEIAEMRAALEVVALRNAAPRLTSAHLARIELAMIEGDNAETV 123 A PRRGVRVAPLD +S KEI EMR ALEVVALRNAAPR T LA IELA+IE DNAET+ Sbjct: 62 AAPRRGVRVAPLDAKSTKEIVEMRVALEVVALRNAAPRYTPTQLAAIELALIEADNAETI 121 Query: 124 QDFEMANRAFHHALVAPCAMPRLLASLDGLQLANSRLVFAMARNAGWRPRPSQDHRVILQ 183 Q+FE ANRAFH ALVAPCAMPRLLASLDGL+LANSRLV AMARNAGWRPR +QDHR+ILQ Sbjct: 122 QEFETANRAFHRALVAPCAMPRLLASLDGLRLANSRLVLAMARNAGWRPRTNQDHRLILQ 181 Query: 184 ALRARNIEQACSLLARHIQTIERLALPAA 212 ALRAR I AC LL RH QTIERLA P Sbjct: 182 ALRARQIGHACELLTRHNQTIERLARPGG 210 >ref|YP_001204485.1| GntR family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL76248.1| putative transcriptional regulatory protein, GntR family [Bradyrhizobium sp. ORS 278] Length = 211 Score = 315 bits (807), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 162/207 (78%), Positives = 174/207 (84%) Query: 6 ENTTTAGRIAEAIGDRIISGELLPDAPLRQDHVAREFHSSHVPVREAFRQLEAQHLVVAV 65 E+ TTA RIAEAI +RI+SG L DAPLRQDH+AREF SSHVPVREAFRQLEA +LVVA Sbjct: 4 ESLTTAHRIAEAITERIVSGALPADAPLRQDHIAREFKSSHVPVREAFRQLEALYLVVAT 63 Query: 66 PRRGVRVAPLDTRSVKEIAEMRAALEVVALRNAAPRLTSAHLARIELAMIEGDNAETVQD 125 PRRGVRVAPLD ++ KEI EMRAALEVVALRNAAPR T AHLA IELA+IEGDNAET+ + Sbjct: 64 PRRGVRVAPLDAKATKEIVEMRAALEVVALRNAAPRYTPAHLAAIELALIEGDNAETISE 123 Query: 126 FEMANRAFHHALVAPCAMPRLLASLDGLQLANSRLVFAMARNAGWRPRPSQDHRVILQAL 185 FE ANRAFH ALVAPCAMPRLLASLDGL+LANSRLV AMAR AGWRPR + DHR ILQAL Sbjct: 124 FETANRAFHRALVAPCAMPRLLASLDGLRLANSRLVLAMARTAGWRPRSNGDHRQILQAL 183 Query: 186 RARNIEQACSLLARHIQTIERLALPAA 212 R R I AC LL RH QTIERLA P Sbjct: 184 RERQIGHACELLTRHNQTIERLARPGG 210 >ref|YP_004614166.1| GntR family transcriptional regulator [Mesorhizobium opportunistum WSM2075] gb|AEH90072.1| transcriptional regulator, GntR family [Mesorhizobium opportunistum WSM2075] Length = 222 Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 118/203 (58%), Positives = 144/203 (70%), Gaps = 1/203 (0%) Query: 4 EGENTTTAGRIAEAIGDRIISGELLPDAPLRQDHVAREFHSSHVPVREAFRQLEAQHLVV 63 +G + T A RI +A+ DRIISG + P A LRQDH+A EF++SHVPVREAFR+LEAQ L V Sbjct: 3 KGTDDTIAVRIGKALADRIISGAIEPGARLRQDHIAEEFNTSHVPVREAFRRLEAQGLAV 62 Query: 64 AVPRRGVRVAPLDTRSVKEIAEMRAALEVVALRNAAPRLTSAHLARIELAMIEGDNAETV 123 + PRRGVRVA D VKE+AEMRAALEV+ALR+AAP LTSA L E A GD + V Sbjct: 63 SEPRRGVRVAAFDLGEVKEVAEMRAALEVLALRHAAPHLTSAILDLAEEATKAGDKSRDV 122 Query: 124 QDFEMANRAFHHALVAPCAMPRLLASLDGLQLANSRLVFAMARNAGWRPRPSQDHRVILQ 183 + +E ANRAFH ++APC MPRLLA++D L A++R +FA R+ W R QDHR IL Sbjct: 123 RSWEEANRAFHRLILAPCGMPRLLATIDDLHAASARFLFAAWRSE-WETRTDQDHRAILA 181 Query: 184 ALRARNIEQACSLLARHIQTIER 206 ALR N E A + L RH+Q I R Sbjct: 182 ALRQGNTESAAATLGRHVQWIGR 204 >ref|NP_107746.1| transcription regulator [Mesorhizobium loti MAFF303099] dbj|BAB53532.1| transcription regulator [Mesorhizobium loti MAFF303099] Length = 222 Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 118/203 (58%), Positives = 144/203 (70%), Gaps = 1/203 (0%) Query: 4 EGENTTTAGRIAEAIGDRIISGELLPDAPLRQDHVAREFHSSHVPVREAFRQLEAQHLVV 63 +G + T A RI++ + DRIISG + P A LRQDHVA EF++SHVPVREAFR+LEAQ L V Sbjct: 3 KGTDDTIAVRISKVLADRIISGAIEPGARLRQDHVAEEFNTSHVPVREAFRRLEAQGLAV 62 Query: 64 AVPRRGVRVAPLDTRSVKEIAEMRAALEVVALRNAAPRLTSAHLARIELAMIEGDNAETV 123 + PRRGVRVA D VKE+AEMRAALEV+ALR+AAP LTSA L E A GD + V Sbjct: 63 SEPRRGVRVAAFDLGEVKEVAEMRAALEVLALRHAAPHLTSAILDLAEEATKAGDKSRDV 122 Query: 124 QDFEMANRAFHHALVAPCAMPRLLASLDGLQLANSRLVFAMARNAGWRPRPSQDHRVILQ 183 + +E ANRAFH ++APC MPRLLA++D L A++R +FA R+ W R QDHR IL Sbjct: 123 RSWEEANRAFHRLILAPCGMPRLLATIDDLHAASARFLFAAWRSE-WEARTDQDHRAILT 181 Query: 184 ALRARNIEQACSLLARHIQTIER 206 ALR N E A + L RH+Q I R Sbjct: 182 ALRQGNTESAAATLGRHVQWIGR 204