BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0233.p         (98 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_570546.1| regulatory protein ArsR [Rhodopseudomonas palus...   168   2e-40
ref|YP_485588.1| ArsR family transcriptional regulator [Rhodopse...   167   5e-40
ref|YP_571848.1| ArsR family transcriptional regulator [Nitrobac...   161   4e-38
ref|YP_004634386.1| putative ArsR family transcriptional regulat...   157   7e-37
ref|NP_769731.1| transcriptional regulator [Bradyrhizobium japon...   155   1e-36

>ref|YP_570546.1| regulatory protein ArsR [Rhodopseudomonas palustris BisB5]
 gb|ABE40645.1| transcriptional regulator, ArsR family [Rhodopseudomonas palustris
           BisB5]
          Length = 105

 Score =  168 bits (426), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 78/96 (81%), Positives = 88/96 (91%)

Query: 3   LEALGNPTRLKIYRALVRAGQAGLPVGRLQDKLKIAPSTLSHHVKTLVTAGLITQVREAT 62
            EALGNPTRLKIYR LVRAG+AG PVGRLQ++LKIAPSTLSHH+KTLV+AGLI QVR+AT
Sbjct: 10  FEALGNPTRLKIYRTLVRAGEAGTPVGRLQERLKIAPSTLSHHLKTLVSAGLIRQVRDAT 69

Query: 63  TLTCHANYDVMQGLVDFLVAECCADATECKDTSTAA 98
           TL CHANYDVM+GL+DF+VAECCADA E KDT +AA
Sbjct: 70  TLNCHANYDVMRGLMDFMVAECCADAVELKDTKSAA 105


>ref|YP_485588.1| ArsR family transcriptional regulator [Rhodopseudomonas palustris
           HaA2]
 gb|ABD06677.1| transcriptional regulator, ArsR family [Rhodopseudomonas palustris
           HaA2]
          Length = 123

 Score =  167 bits (423), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 79/96 (82%), Positives = 88/96 (91%)

Query: 3   LEALGNPTRLKIYRALVRAGQAGLPVGRLQDKLKIAPSTLSHHVKTLVTAGLITQVREAT 62
            EALGNPTRLKIYRALVRAG+AG PVGRLQ++LKIAPSTLSHH+KTLV AGLI QVR+AT
Sbjct: 28  FEALGNPTRLKIYRALVRAGEAGTPVGRLQERLKIAPSTLSHHLKTLVAAGLIRQVRDAT 87

Query: 63  TLTCHANYDVMQGLVDFLVAECCADATECKDTSTAA 98
           TL CHANYDVM+GL+DF+VAECCADAT  KDT +AA
Sbjct: 88  TLNCHANYDVMRGLLDFMVAECCADATVPKDTKSAA 123


>ref|YP_571848.1| ArsR family transcriptional regulator [Nitrobacter hamburgensis
           X14]
 gb|ABE65016.1| transcriptional regulator, ArsR family [Nitrobacter hamburgensis
           X14]
          Length = 105

 Score =  161 bits (407), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 75/96 (78%), Positives = 82/96 (85%)

Query: 3   LEALGNPTRLKIYRALVRAGQAGLPVGRLQDKLKIAPSTLSHHVKTLVTAGLITQVREAT 62
           LEALGNPTRLKIYRALVRAG  G+PVGRLQ+KLK+APSTLSHH+K+LV+ GLI QVRE+T
Sbjct: 10  LEALGNPTRLKIYRALVRAGTVGMPVGRLQEKLKVAPSTLSHHIKSLVSVGLIRQVREST 69

Query: 63  TLTCHANYDVMQGLVDFLVAECCADATECKDTSTAA 98
           TL CHA YD M  LVDFLVAECCAD   CKD  TAA
Sbjct: 70  TLVCHAEYDAMHALVDFLVAECCADEAGCKDAKTAA 105


>ref|YP_004634386.1| putative ArsR family transcriptional regulator [Oligotropha
           carboxidovorans OM5]
 gb|AEI04640.1| putative transcriptional regulator, ArsR family [Oligotropha
           carboxidovorans OM4]
 gb|AEI08269.1| putative transcriptional regulator, ArsR family [Oligotropha
           carboxidovorans OM5]
          Length = 107

 Score =  157 bits (396), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 75/99 (75%), Positives = 83/99 (83%), Gaps = 2/99 (2%)

Query: 2   HLEALGNPTRLKIYRALVRAGQAGLPVGRLQDKLKIAPSTLSHHVKTLVTAGLITQVREA 61
            LEALGNPTRL+IYR LVRAGQ+G+PVGRLQ+KLK+APSTLSHHVK+LV+ GLI QVRE 
Sbjct: 9   RLEALGNPTRLRIYRTLVRAGQSGMPVGRLQEKLKVAPSTLSHHVKSLVSVGLIRQVREG 68

Query: 62  TTLTCHANYDVMQGLVDFLVAECCAD--ATECKDTSTAA 98
           TTL CHA YD M+GLVDFLVAECCAD   T C    TAA
Sbjct: 69  TTLVCHAEYDTMRGLVDFLVAECCADEATTGCNGRKTAA 107


>ref|NP_769731.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48356.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
           110]
          Length = 110

 Score =  155 bits (393), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/96 (76%), Positives = 83/96 (86%)

Query: 3   LEALGNPTRLKIYRALVRAGQAGLPVGRLQDKLKIAPSTLSHHVKTLVTAGLITQVREAT 62
           LEALGN TRL+IYRALVRAG++G+PVGRLQDKLKI  STLSHH+K+LV  GLI+QVRE+T
Sbjct: 15  LEALGNRTRLQIYRALVRAGRSGMPVGRLQDKLKIPASTLSHHIKSLVAVGLISQVREST 74

Query: 63  TLTCHANYDVMQGLVDFLVAECCADATECKDTSTAA 98
           TL CHANYD+M+GLVDFL AECCAD   CK   TAA
Sbjct: 75  TLVCHANYDLMRGLVDFLAAECCADEVGCKGARTAA 110