BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0232.p (411 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002290705.1| FAD dependent oxidoreductase [Oligotropha ca... 588 e-166 ref|YP_571849.1| putative secreted protein [Nitrobacter hamburge... 587 e-166 ref|NP_769732.1| secreted protein [Bradyrhizobium japonicum USDA... 586 e-165 ref|YP_001241445.1| pyridine nucleotide-disulfide oxidoreductase... 530 e-148 ref|YP_001207021.1| putative pyridine nucleotide-disulfide oxido... 508 e-142 >ref|YP_002290705.1| FAD dependent oxidoreductase [Oligotropha carboxidovorans OM5] ref|YP_004634387.1| hypothetical protein OCA5_pOC16700720 [Oligotropha carboxidovorans OM5] gb|ACI94840.1| FAD dependent oxidoreductase [Oligotropha carboxidovorans OM5] gb|AEI04641.1| hypothetical protein OCA4_pOC167B00720 [Oligotropha carboxidovorans OM4] gb|AEI08270.1| hypothetical protein OCA5_pOC16700720 [Oligotropha carboxidovorans OM5] Length = 455 Score = 588 bits (1516), Expect = e-166, Method: Compositional matrix adjust. Identities = 283/414 (68%), Positives = 330/414 (79%), Gaps = 4/414 (0%) Query: 1 MRQWSHVQLFSPWEYNVDKAAERLLAPTGWNSPDPKQYPTGGELLSQYLEPLAHRTVLKD 60 +RQW HVQLFSPW+YN+D AA RLLA TGWNSPDP+ Y TGGELL YL+PLA +T LKD Sbjct: 42 VRQWRHVQLFSPWKYNIDGAAARLLASTGWNSPDPEVYATGGELLDYYLDPLATKTPLKD 101 Query: 61 HIHTSSRVTDISRVGFDKLKTKGRGDAPFELRYQNGQGPKSIRADAVIDTSGTWFSPNPG 120 I TSSRVT ISRVGFDK KTKGR APFE+R+QNG+GP+ +RADAVID SGTW SPNP Sbjct: 102 VIRTSSRVTAISRVGFDKAKTKGRESAPFEIRFQNGKGPEVVRADAVIDVSGTWSSPNPA 161 Query: 121 GANGLPALGERENATKIAYGMPDVLGKDRARYAGKAIAVLGAGHSAVGTLIELTNLKSQA 180 GANGL A+GER+ A++IAYGMPD+ G DR RY GK +AVLGAGHSA+GTL +L L+ Sbjct: 162 GANGLSAIGERDCASRIAYGMPDISGNDRERYKGKTVAVLGAGHSAIGTLADLARLRDAD 221 Query: 181 ASTEVIWILRGDNPAKAFGGGVNDKLVARGELGMALAGLVTSGQIRVEASFSVTRIDRDG 240 STEVIW+LRG +P+KAFGGG NDKLVARGELG A AGLV +G+I+VE+ F T + G Sbjct: 222 PSTEVIWLLRGTDPSKAFGGGANDKLVARGELGTAFAGLVVNGKIKVESGFGATHVSASG 281 Query: 241 ERLKL-ATAGCCDRSIVADELIVATGFRSDLEFLRELRIQLDPAIECPIALAPLIDPNEH 299 ERL++ A + CC R ++ DELIVATGFR DL FL E+R++LD +IE P+ LAPLIDPNEH Sbjct: 282 ERLRIGAGSACCGRHVIVDELIVATGFRPDLSFLNEMRLRLDSSIEAPVDLAPLIDPNEH 341 Query: 300 SCGTVRPHGAAELAQDEPGFYFAGMKSYGRAPTFLMLTGYEQVRSIAAKIAGDNEAAARV 359 SCGTVRPHGA EL QDEPG Y AGMKSYGRAPTFLM+TGYEQVRSIAA+IAGD+EAAARV Sbjct: 342 SCGTVRPHGARELRQDEPGLYLAGMKSYGRAPTFLMITGYEQVRSIAAEIAGDHEAAARV 401 Query: 360 ELVLPETGVCSRSATPGQVE---CCGGSATERADACCVDDAKAKGAGKAGCGCA 410 EL LPETGVC+R + CCGG +ACC +DA AK GK+G GC+ Sbjct: 402 ELELPETGVCTRGGVESGIASSGCCGGPVPADVNACCAEDANAKSTGKSGRGCS 455 >ref|YP_571849.1| putative secreted protein [Nitrobacter hamburgensis X14] gb|ABE65017.1| putative secreted protein [Nitrobacter hamburgensis X14] Length = 456 Score = 587 bits (1514), Expect = e-166, Method: Compositional matrix adjust. Identities = 283/414 (68%), Positives = 330/414 (79%), Gaps = 4/414 (0%) Query: 1 MRQWSHVQLFSPWEYNVDKAAERLLAPTGWNSPDPKQYPTGGELLSQYLEPLAHRTVLKD 60 +RQW HVQLFSPW+YN+D AA RLLA TGWNSPDP+ YPTGGEL+ +YL+PLA +T L+D Sbjct: 43 VRQWRHVQLFSPWKYNIDGAAARLLAATGWNSPDPEAYPTGGELIERYLDPLATKTPLRD 102 Query: 61 HIHTSSRVTDISRVGFDKLKTKGRGDAPFELRYQNGQGPKSIRADAVIDTSGTWFSPNPG 120 I TSSRVT ISRVGFDK KTKGR APFE+R+QNG+GP+++RADAVID SGTW SPNP Sbjct: 103 VIRTSSRVTAISRVGFDKAKTKGRESAPFEIRFQNGKGPETLRADAVIDASGTWSSPNPA 162 Query: 121 GANGLPALGERENATKIAYGMPDVLGKDRARYAGKAIAVLGAGHSAVGTLIELTNLKSQA 180 G NGL A+GERE A +I YGMPDV G +R RY G+ +AV+GAGHSA+GTLIEL L+ A Sbjct: 163 GVNGLAAIGERECAARITYGMPDVRGTERERYEGQTVAVVGAGHSAIGTLIELARLRDNA 222 Query: 181 ASTEVIWILRGDNPAKAFGGGVNDKLVARGELGMALAGLVTSGQIRVEASFSVTRIDRDG 240 T VIW+LRG +P+KAFGGG NDKLVARGELG A A LV+ G I+VE F +T + G Sbjct: 223 PPTNVIWLLRGTDPSKAFGGGANDKLVARGELGAAFADLVSKGAIQVETGFGITHVSASG 282 Query: 241 ERLKL-ATAGCCDRSIVADELIVATGFRSDLEFLRELRIQLDPAIECPIALAPLIDPNEH 299 ERL++ A + CC R +V DELIVATGFR DL FL E+R++LD AIE P+ LAPL+DPNEH Sbjct: 283 ERLRIGAGSACCGRHVVVDELIVATGFRPDLWFLSEMRLRLDSAIEAPVDLAPLVDPNEH 342 Query: 300 SCGTVRPHGAAELAQDEPGFYFAGMKSYGRAPTFLMLTGYEQVRSIAAKIAGDNEAAARV 359 SCGTVRPHGA EL QDEPG Y AGMKSYGRAPTFLM+TGYEQVRSIAA+IAGD+EAAARV Sbjct: 343 SCGTVRPHGARELRQDEPGLYLAGMKSYGRAPTFLMITGYEQVRSIAAEIAGDHEAAARV 402 Query: 360 ELVLPETGVCSRSAT---PGQVECCGGSATERADACCVDDAKAKGAGKAGCGCA 410 EL LPETGVC+R CCGG A ADACC +DA AK AG++GC C+ Sbjct: 403 ELDLPETGVCTRGGVEVGTASAGCCGGPAPVGADACCAEDADAKTAGRSGCSCS 456 >ref|NP_769732.1| secreted protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48357.1| blr3092 [Bradyrhizobium japonicum USDA 110] Length = 456 Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust. Identities = 283/414 (68%), Positives = 327/414 (78%), Gaps = 4/414 (0%) Query: 1 MRQWSHVQLFSPWEYNVDKAAERLLAPTGWNSPDPKQYPTGGELLSQYLEPLAHRTVLKD 60 +RQW HVQLFSPWEYN+DKAA RLLAPTGWNSPDP+ YPTGGELL +YL PLA RT L++ Sbjct: 43 IRQWQHVQLFSPWEYNIDKAAARLLAPTGWNSPDPQSYPTGGELLDRYLTPLATRTPLRE 102 Query: 61 HIHTSSRVTDISRVGFDKLKTKGRGDAPFELRYQNGQGPKSIRADAVIDTSGTWFSPNPG 120 I TSSRV+ ISRVGFDK +T+GR APFE+RY+NG GP+ +RADAVIDTSGTWFSPNP Sbjct: 103 AIRTSSRVSAISRVGFDKARTRGREQAPFEIRYRNGSGPEVLRADAVIDTSGTWFSPNPA 162 Query: 121 GANGLPALGERENATKIAYGMPDVLGKDRARYAGKAIAVLGAGHSAVGTLIELTNLKSQA 180 G+NGLPA+GE E A ++AYGMPDV G R+RYAGK +AVLGAGHSAVGTLI+L +L + Sbjct: 163 GSNGLPAIGEPECAGRVAYGMPDVRGAARSRYAGKTVAVLGAGHSAVGTLIDLVHLAGEV 222 Query: 181 ASTEVIWILRGDNPAKAFGGGVNDKLVARGELGMALAGLVTSGQIRVEASFSVTRIDRDG 240 T+ +W+LRG +PAKAFGGG NDKL ARGELG A A LV +G+IR+E F VT + Sbjct: 223 PGTQPVWLLRGADPAKAFGGGRNDKLAARGELGSAFAALVAAGKIRIETEFGVTHLTDSE 282 Query: 241 ERLKLATAGCCD-RSIVADELIVATGFRSDLEFLRELRIQLDPAIECPIALAPLIDPNEH 299 RLK+A R ++ADELIV+TGFR D FL ELR++LDPAIE P+ALAPLIDPNEH Sbjct: 283 GRLKIAAGALSGARHVIADELIVSTGFRPDFSFLSELRLRLDPAIEAPVALAPLIDPNEH 342 Query: 300 SCGTVRPHGAAELAQDEPGFYFAGMKSYGRAPTFLMLTGYEQVRSIAAKIAGDNEAAARV 359 SCGTVRPHGA ELA DEPGFY AGMKSYGRAPTFLM+TGYEQVRSIAA IAGD AAARV Sbjct: 343 SCGTVRPHGARELAHDEPGFYLAGMKSYGRAPTFLMMTGYEQVRSIAADIAGDKRAAARV 402 Query: 360 ELVLPETGVCSR---SATPGQVECCGGSATERADACCVDDAKAKGAGKAGCGCA 410 ELVLPETGVC+R CCGG + + ACC D AK +G +GCGC+ Sbjct: 403 ELVLPETGVCTRGGLETAAAASGCCGGPPKDVSSACCAADETAKTSGASGCGCS 456 >ref|YP_001241445.1| pyridine nucleotide-disulfide oxidoreductase family protein [Bradyrhizobium sp. BTAi1] gb|ABQ37539.1| putative exported protein of unknown function with pyridine nucleotide-disulfide oxidoreductase family domain [Bradyrhizobium sp. BTAi1] Length = 454 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 273/415 (65%), Positives = 321/415 (77%), Gaps = 8/415 (1%) Query: 1 MRQWSHVQLFSPWEYNVDKAAERLLAPTGWNSPDPKQYPTGGELLSQYLEPLAHRTVLKD 60 +RQW HVQLFSPW+YN+D AA RLL+ TGW P P+ YPTG EL+ YL PLA RT L++ Sbjct: 43 VRQWQHVQLFSPWKYNIDTAAARLLSATGWTPPAPEVYPTGRELIEAYLAPLATRTALRE 102 Query: 61 HIHTSSRVTDISRVGFDKLKTKGRGDAPFELRYQNGQGPKSIRADAVIDTSGTWFSPNPG 120 +HTS RVT ISRVGFDK K+KGR PFE+RY+NG G +++ADAVID SGTWFSPNP Sbjct: 103 VVHTSHRVTAISRVGFDKAKSKGRAAVPFEVRYRNGDGEAAMQADAVIDVSGTWFSPNPA 162 Query: 121 GANGLPALGERENATKIAYGMPDVLGKDRARYAGKAIAVLGAGHSAVGTLIELTNLKSQA 180 G+NGLPA GE ++ IAY MPDVL R RYAG+ +AVLG+GHSA+GTL+EL L +A Sbjct: 163 GSNGLPARGEIDHRNHIAYAMPDVLNAQRGRYAGRTVAVLGSGHSAIGTLMELAALAEEA 222 Query: 181 ASTEVIWILRGDNPAKAFGGGVNDKLVARGELGMALAGLVTSGQIRVEASFSVTRI-DRD 239 T+ IW+LRGD+P +AFGGG D+L ARGELGMA A LV SG+IR+E F VT+I +D Sbjct: 223 QGTQAIWLLRGDDPTRAFGGGSADQLAARGELGMAFAALVRSGRIRIETGFHVTQIAGQD 282 Query: 240 GERLKLATAGCCDRSIVADELIVATGFRSDLEFLRELRIQLDPAIECPIALAPLIDPNEH 299 G+ +A++G R++ DELIVATGFR DL L ELR++LDPAIE P+ALAPLIDPNEH Sbjct: 283 GQLQVVASSG---RTVSTDELIVATGFRPDLSLLSELRVRLDPAIEAPVALAPLIDPNEH 339 Query: 300 SCGTVRPHGAAELAQ-DEPGFYFAGMKSYGRAPTFLMLTGYEQVRSIAAKIAGDNEAAAR 358 SCGTVRPHGA ELAQ DEPG Y AGMKSYGRAPTFLM+TGYEQVRSI A IAGD AAAR Sbjct: 340 SCGTVRPHGARELAQADEPGLYLAGMKSYGRAPTFLMMTGYEQVRSITADIAGDKAAAAR 399 Query: 359 VELVLPETGVCSR---SATPGQVECCGGSATERADACCVDDAKAKGAGKAGCGCA 410 VEL LPETGVC+R + CCGG A R D+CC DDAKAK AG+AGCGC+ Sbjct: 400 VELQLPETGVCTRGGLESIAALSGCCGGPAPSRVDSCCADDAKAKAAGRAGCGCS 454 >ref|YP_001207021.1| putative pyridine nucleotide-disulfide oxidoreductase family protein [Bradyrhizobium sp. ORS 278] emb|CAL78804.1| conserved hypothetical protein; putative signal peptide; putative Pyridine nucleotide-disulphide oxidoreductase family protein [Bradyrhizobium sp. ORS 278] Length = 454 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 280/414 (67%), Positives = 322/414 (77%), Gaps = 6/414 (1%) Query: 1 MRQWSHVQLFSPWEYNVDKAAERLLAPTGWNSPDPKQYPTGGELLSQYLEPLAHRTVLKD 60 +RQW HVQLFSPW+YNVD A+ RLLA GWN+PDP+ YPTG EL+ YL PLA RT L+D Sbjct: 43 VRQWQHVQLFSPWKYNVDIASARLLAAAGWNAPDPETYPTGRELIESYLAPLATRTALRD 102 Query: 61 HIHTSSRVTDISRVGFDKLKTKGRGDAPFELRYQNGQGPKSIRADAVIDTSGTWFSPNPG 120 I TS RVT ISR GFDK K+KGR A FELR +NG+G ++ ADAVID SGTWFSPNP Sbjct: 103 VIRTSHRVTAISRTGFDKAKSKGRAAARFELRTRNGKGDAALLADAVIDVSGTWFSPNPA 162 Query: 121 GANGLPALGERENATKIAYGMPDVLGKDRARYAGKAIAVLGAGHSAVGTLIELTNLKSQA 180 G NGLPALGE E+A +IAYGMPDV R+RYAG+A+AVLG GHSAVGTL++L L + Sbjct: 163 GGNGLPALGEAEHAPRIAYGMPDVRDAQRSRYAGRAVAVLGGGHSAVGTLLDLAALAADE 222 Query: 181 ASTEVIWILRGDNPAKAFGGGVNDKLVARGELGMALAGLVTSGQIRVEASFSVTRIDRDG 240 T+ IW+LR ++PAK+FGGG D+L ARGELGMA A LV SG+I+VE FSV RI+ + Sbjct: 223 PGTQAIWLLRANDPAKSFGGGSADQLAARGELGMAFAALVRSGRIQVETGFSVARIEDED 282 Query: 241 ERLKLATAGCCDRSIVADELIVATGFRSDLEFLRELRIQLDPAIECPIALAPLIDPNEHS 300 RLK+ G DR I ADELIVATGFR DL L ELR++LDPAIE P+ALAPLIDPNEHS Sbjct: 283 RRLKITARG--DRRINADELIVATGFRPDLSLLSELRLRLDPAIEAPVALAPLIDPNEHS 340 Query: 301 CGTVRPHGAAELAQ-DEPGFYFAGMKSYGRAPTFLMLTGYEQVRSIAAKIAGDNEAAARV 359 CGTVRPHGA ELAQ DE G Y AGMKSYGRAPTFLM+TGYEQVRSI A IAGD +AAARV Sbjct: 341 CGTVRPHGARELAQADEAGLYLAGMKSYGRAPTFLMITGYEQVRSITADIAGDKKAAARV 400 Query: 360 ELVLPETGVCSR---SATPGQVECCGGSATERADACCVDDAKAKGAGKAGCGCA 410 EL LPETGVC+R ++ P CCGG A ++CC DDAKAK AG+AGCGCA Sbjct: 401 ELTLPETGVCTRGGLASIPALSGCCGGPAPSGVESCCADDAKAKAAGRAGCGCA 454