BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0230.p (387 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771687.1| transport protein [Bradyrhizobium japonicum USD... 362 6e-98 gb|ACF77049.1| putative major facilitator superfamily [Halomonas... 358 7e-97 ref|YP_002290704.1| major facilitator superfamily MFS_1 [Oligotr... 355 5e-96 ref|ZP_08666508.1| major facilitator protein [Paracoccus sp. TRP] 354 2e-95 ref|YP_001207022.1| major facilitator superfamily permease [Brad... 353 3e-95 >ref|NP_771687.1| transport protein [Bradyrhizobium japonicum USDA 110] dbj|BAC50312.1| blr5047 [Bradyrhizobium japonicum USDA 110] Length = 385 Score = 362 bits (929), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 212/388 (54%), Positives = 273/388 (70%), Gaps = 5/388 (1%) Query: 1 MSQRQLPIILALGSSQTLAWASTYYLPAILANPIARDLGISSTLVFGALSVGLIIAGLLG 60 MSQRQLPIILALG++QTLAWAS+YYLPA+LA+P+A DLG+SS +FGA S L+I+ +LG Sbjct: 1 MSQRQLPIILALGTTQTLAWASSYYLPALLADPMAHDLGVSSNWIFGAFSASLVISAMLG 60 Query: 61 PRVGHFIDTFGGRGLLAVSNVVFAAGLVLLSFASGSVVLIASWLILGVGMGMGLYEAAFA 120 PR+G ID GGR +L+ SN+ AAGLVLL + +V+ +WL+LG+GM MGLY+AAFA Sbjct: 61 PRIGRQIDLVGGRQVLSASNLTMAAGLVLLGLSQSVLVMAVAWLVLGIGMAMGLYDAAFA 120 Query: 121 TLTRMYGYAARRPITGITLIAGFASTIGWPITTYLDAHFGWRIACQVWALIHIAFALPLN 180 L R+YG ARRPITGITL+AGFAST+GWP+T + AH GWR C WA +I LPLN Sbjct: 121 ALGRIYGTEARRPITGITLMAGFASTVGWPLTAWGLAHIGWRETCFAWAAANILIGLPLN 180 Query: 181 -LSLPRAKPFQAALPDEVRPTESAQQSETVAMILVAYVFAATGFVSSGLSALMPSLLLQF 239 LP K + A +P ++ MIL+A+VFAA V+ ++ P ++ Sbjct: 181 FFMLPAIKGAKQAAATAAKPHVPLDRT----MILLAFVFAAAWTVTGAMAVHFPRIVEAT 236 Query: 240 GATPAAALLAGTLIGPAQVAARIIEAGWLSRYHPLASTRLATVMNPLGIAVLAAGGPVFA 299 GAT A+ AG LIGPAQV ARI+EA LSR+HPL STRLA V +P+G AV+A G A Sbjct: 237 GATHVEAIAAGALIGPAQVLARILEASVLSRFHPLWSTRLACVTHPIGAAVVAIFGGAAA 296 Query: 300 PAFAIFYGAGNGILTIARGTLPLALFGPHGFGRRVGVLSLPARATGAVAPLAVGLFAEYL 359 AFA+ +G+GNGILTIARGTLPL++FGP FG R+G++ PAR AVAPLA GL + + Sbjct: 297 SAFALLHGSGNGILTIARGTLPLSIFGPKDFGYRLGIIGAPARMAQAVAPLAFGLLIDVM 356 Query: 360 GAGALWITALASVSAFIALFFLRARQAP 387 GA L +++ S+SA ALF +RA + P Sbjct: 357 GAKVLMVSSALSLSALAALFLIRAERRP 384 >gb|ACF77049.1| putative major facilitator superfamily [Halomonas sp. HAL1] Length = 383 Score = 358 bits (920), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 203/377 (53%), Positives = 265/377 (70%), Gaps = 3/377 (0%) Query: 8 IILALGSSQTLAWASTYYLPAILANPIARDLGISSTLVFGALSVGLIIAGLLGPRVGHFI 67 + L LGS+QTLAWAS+YYLPAILA P+ARDLG+ ++ VF A S L++ +LGP VG +I Sbjct: 9 LTLTLGSAQTLAWASSYYLPAILAVPMARDLGMPTSWVFAAFSAALLLTAMLGPSVGRWI 68 Query: 68 DTFGGRGLLAVSNVVFAAGLVLLSFASGSVVLIASWLILGVGMGMGLYEAAFATLTRMYG 127 D GGRG+L SN V A GL++++ + G L+ +WLI G+GM MGLY+AAFATL R+ G Sbjct: 69 DMRGGRGVLMASNGVMALGLIIMALSQGVFSLMLAWLITGIGMAMGLYDAAFATLGRLLG 128 Query: 128 YAARRPITGITLIAGFASTIGWPITTYLDAHFGWRIACQVWALIHIAFALPLNLSLPRAK 187 +AR ITG+TL+AGFASTIGWP+T L+ FGWR AC VWA++HI LP N LP+A Sbjct: 129 RSARASITGVTLLAGFASTIGWPVTALLENQFGWRAACVVWAMLHIVIGLPPNALLPKAG 188 Query: 188 PFQAALPDEVRPTESAQQSETVAMILVAYVFAATGFVSSGLSALMPSLLLQFGATPAAAL 247 QA DE +P + +AM+L+A+VFAA FVS+ ++A +P LL + G + + A+ Sbjct: 189 ASQAEHKDE-KPVPPPDRPR-LAMVLLAFVFAAGWFVSTAMAAHLPRLLQETGVSLSVAV 246 Query: 248 LAGTLIGPAQVAARIIEAGWLSRYHPLASTRLATVMNPLGIAVLAAGGPVFAPAFAIFYG 307 A L+GPAQVAAR+ E L HPL + R+AT ++PLG A+LA G + A FA+ +G Sbjct: 247 AAAALVGPAQVAARLGEFALLRHLHPLVAARVATTLHPLGAALLATLG-MPAAGFALLHG 305 Query: 308 AGNGILTIARGTLPLALFGPHGFGRRVGVLSLPARATGAVAPLAVGLFAEYLGAGALWIT 367 AGNG++TIA GTLPLALFGP GFGRR G++ PARA A APL GL E GAGALW+T Sbjct: 306 AGNGMMTIASGTLPLALFGPAGFGRRQGLIIAPARAMQAFAPLLFGLLIEQYGAGALWLT 365 Query: 368 ALASVSAFIALFFLRAR 384 + VSA +AL +R R Sbjct: 366 SGLMVSALLALLMIRCR 382 >ref|YP_002290704.1| major facilitator superfamily MFS_1 [Oligotropha carboxidovorans OM5] ref|YP_004634388.1| putative MFS transporter protein [Oligotropha carboxidovorans OM5] gb|ACI94839.1| major facilitator superfamily MFS_1 [Oligotropha carboxidovorans OM5] gb|AEI04642.1| putative MFS transporter protein [Oligotropha carboxidovorans OM4] gb|AEI08271.1| putative MFS transporter protein [Oligotropha carboxidovorans OM5] Length = 393 Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 205/383 (53%), Positives = 268/383 (69%), Gaps = 7/383 (1%) Query: 1 MSQRQLPIILALGSSQTLAWASTYYLPAILANPIARDLGISSTLVFGALSVGLIIAGLLG 60 MSQRQLP+I+ALG++QTLAWAS+YYLPAILA+PIA DLGISS F A S ++I+GLLG Sbjct: 1 MSQRQLPVIVALGTTQTLAWASSYYLPAILADPIAYDLGISSNWFFAAFSAAMVISGLLG 60 Query: 61 PRVGHFIDTFGGRGLLAVSNVVFAAGLVLLSFASGSVVLIASWLILGVGMGMGLYEAAFA 120 PRVG ID FGGR +L+ SNV+FAAGL LL ++ +L +W +LG+GM GLY+AAF+ Sbjct: 61 PRVGRQIDLFGGRPVLSGSNVIFAAGLALLGASTSGWMLGVAWFLLGIGMATGLYDAAFS 120 Query: 121 TLTRMYGYAARRPITGITLIAGFASTIGWPITTYLDAHFGWRIACQVWALIHIAFALPLN 180 L R+YG ARR ITGITLIAGFAST+GWP++++ GWR C WA H+ LPLN Sbjct: 121 ALGRIYGDNARRAITGITLIAGFASTVGWPLSSWGLETIGWRNTCYAWAAAHLLIGLPLN 180 Query: 181 LS-LPRAKPFQAALPDEVRPTESAQQSETVAMILVAYVFAATGFVSSGLSALMPSLLLQF 239 L LP+ + A V+P + MIL++ FAA V+S ++A +P ++ F Sbjct: 181 LLFLPKVAVAKRAEGSAVKPHIQIDRP----MILLSLAFAAAWTVTSAMAAHLPRIVEAF 236 Query: 240 GATPAAALLAGTLIGPAQVAARIIEAGWLSRYHPLASTRLATVMNPLGIAVLAA-GGPVF 298 GATPA A+ AG +IGPAQVAAR++EA L R+HPL STRLA + +P+G V+ GGP Sbjct: 237 GATPAQAVFAGMMIGPAQVAARVLEASTLGRFHPLFSTRLACITHPIGACVIGIFGGPA- 295 Query: 299 APAFAIFYGAGNGILTIARGTLPLALFGPHGFGRRVGVLSLPARATGAVAPLAVGLFAEY 358 A AFA+ +GAGNG+LTI+RGTLPLA+FGP FG R+G+L P+R AVAPL L + Sbjct: 296 AVAFALLHGAGNGLLTISRGTLPLAIFGPENFGYRLGLLGAPSRVCQAVAPLGFSLLIDS 355 Query: 359 LGAGALWITALASVSAFIALFFL 381 G G + +++ S+ AF AL F+ Sbjct: 356 FGGGVVVASSMLSLVAFGALLFM 378 >ref|ZP_08666508.1| major facilitator protein [Paracoccus sp. TRP] Length = 386 Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 204/379 (53%), Positives = 265/379 (69%), Gaps = 3/379 (0%) Query: 4 RQLPIILALGSSQTLAWASTYYLPAILANPIARDLGISSTLVFGALSVGLIIAGLLGPRV 63 R+ P++ ALGSS T++WAS+YY+PA+LA P+A DLG+S VFGA S+ ++++ ++GP Sbjct: 9 RRAPVVAALGSSLTVSWASSYYIPAVLAVPMAEDLGLSPVWVFGAFSMAMVVSAMVGPWA 68 Query: 64 GHFIDTFGGRGLLAVSNVVFAAGLVLLSFASGSVVLIASWLILGVGMGMGLYEAAFATLT 123 G ID FGGRG+L +SN+VFAAGL LL+ A +VL A W ++G+GMG+GLYEA FATL Sbjct: 69 GARIDGFGGRGVLMLSNLVFAAGLGLLAVAPSPLVLFAGWAVIGLGMGIGLYEAGFATLA 128 Query: 124 RMYGYAARRPITGITLIAGFASTIGWPITTYLDAHFGWRIACQVWALIHIAFALPLNLSL 183 +YG AR PITGITLIAGFAST+GWP++ + A +GWR AC WALIH+ ALPLN L Sbjct: 129 GIYGKDARGPITGITLIAGFASTVGWPLSGVMLATWGWREACLGWALIHLVVALPLNAWL 188 Query: 184 PRAKPFQAALPDEVRPTESAQQSETVAMILVAYVFAATGFVSSGLSALMPSLLLQFGATP 243 P+ AA E P E +A+ L+A+VFAAT F S+ ++A +P LL GA+ Sbjct: 189 PKGTRTVAA---EATPIEEGPPPSRLALWLLAFVFAATWFNSTAMAAHLPGLLQAAGAST 245 Query: 244 AAALLAGTLIGPAQVAARIIEAGWLSRYHPLASTRLATVMNPLGIAVLAAGGPVFAPAFA 303 A A+ AG LIGPAQVAAR++E G L R+HPL STR A +P+ L + G A AFA Sbjct: 246 AVAIAAGALIGPAQVAARVLEFGLLRRFHPLVSTRFAAAAHPVAAVALVSFGGPAAYAFA 305 Query: 304 IFYGAGNGILTIARGTLPLALFGPHGFGRRVGVLSLPARATGAVAPLAVGLFAEYLGAGA 363 + +GAGNGILTIA+GTLPLALFGP G+GRR+G L+ PAR A APL G G A Sbjct: 306 LLHGAGNGILTIAKGTLPLALFGPAGYGRRIGWLNAPARILQAAAPLIFGAALTAWGLSA 365 Query: 364 LWITALASVSAFIALFFLR 382 +W+TA +++FIAL LR Sbjct: 366 IWLTAAIGIASFIALLALR 384 >ref|YP_001207022.1| major facilitator superfamily permease [Bradyrhizobium sp. ORS 278] emb|CAL78805.1| putative Permease of the major facilitator superfamily [Bradyrhizobium sp. ORS 278] Length = 396 Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 203/386 (52%), Positives = 262/386 (67%), Gaps = 4/386 (1%) Query: 1 MSQRQLPIILALGSSQTLAWASTYYLPAILANPIARDLGISSTLVFGALSVGLIIAGLLG 60 M R+L +++ALG++QTLAWAS+YYLPAILA+PIARDLG+S F A S LII+GLLG Sbjct: 1 MQARRLGVVIALGTAQTLAWASSYYLPAILADPIARDLGMSDNWFFAAFSASLIISGLLG 60 Query: 61 PRVGHFIDTFGGRGLLAVSNVVFAAGLVLLSFASGSVVLIASWLILGVGMGMGLYEAAFA 120 PR+G ID GGR +L SN+V A GL LL + V+ +WL LGVGMG+GLY+AAF Sbjct: 61 PRIGRQIDRVGGRQVLCASNLVLAIGLTLLGLSHSLWVMAIAWLWLGVGMGLGLYDAAFG 120 Query: 121 TLTRMYGYAARRPITGITLIAGFASTIGWPITTYLDAHFGWRIACQVWALIHIAFALPLN 180 L R+YG AR ITGITL+AGFAST+GWP++T+ A GWR C WA+ H+ LPLN Sbjct: 121 ALGRIYGKDARGAITGITLLAGFASTVGWPLSTWGLATIGWRETCFAWAVAHLVIGLPLN 180 Query: 181 LSLPRAKPFQAALPDEVRPTESAQQSETVAMILVAYVFAATGFVSSGLSALMPSLLLQFG 240 LSLPR A P ++ P M+L+A+ AA V++ ++ +P L+ FG Sbjct: 181 LSLPRTT---AMAPGDM-PVGKPNIPLDRPMVLIAFAMAAAWTVTAAMAVHLPRLMQAFG 236 Query: 241 ATPAAALLAGTLIGPAQVAARIIEAGWLSRYHPLASTRLATVMNPLGIAVLAAGGPVFAP 300 ATPA AL AG +IGPAQVAAR+ EAG+LSR+HPLAS RLA + +P+G + G A Sbjct: 237 ATPAQALFAGMMIGPAQVAARVFEAGFLSRFHPLASARLACITHPIGALTIGLFGGGAAA 296 Query: 301 AFAIFYGAGNGILTIARGTLPLALFGPHGFGRRVGVLSLPARATGAVAPLAVGLFAEYLG 360 AFA+ +G+GNGILTIARGTLPLA+FGP + R+G++ P+R A APL GL + LG Sbjct: 297 AFALLHGSGNGILTIARGTLPLAIFGPANYAYRLGLIGAPSRICQAFAPLVFGLLIDALG 356 Query: 361 AGALWITALASVSAFIALFFLRARQA 386 G L ++A S+SA AL L A +A Sbjct: 357 RGVLIVSASLSLSALTALMLLSAERA 382