BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0228.p (346 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766772.1| hypothetical protein bll0132 [Bradyrhizobium ja... 442 e-122 ref|YP_001243279.1| hypothetical protein BBta_7522 [Bradyrhizobi... 402 e-110 ref|YP_001890286.1| hypothetical protein Bphyt_6617 [Burkholderi... 334 1e-89 ref|YP_552737.1| hypothetical protein Bxe_B2606 [Burkholderia xe... 331 1e-88 ref|ZP_06842570.1| conserved hypothetical protein [Burkholderia ... 328 9e-88 >ref|NP_766772.1| hypothetical protein bll0132 [Bradyrhizobium japonicum USDA 110] dbj|BAC45397.1| bll0132 [Bradyrhizobium japonicum USDA 110] Length = 345 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 224/313 (71%), Positives = 255/313 (81%), Gaps = 1/313 (0%) Query: 35 KPVKEIANARLAVG-NASFPLYLSADWSSPLPDVTRAVLVLHGVLRNADDYFRAALSAQA 93 KPVK I +ARL+VG + LYLS DWS P P ++RAV+VLHG LRNAD+Y+ +A +AQA Sbjct: 33 KPVKAIGDARLSVGGRGTLRLYLSRDWSMPQPAISRAVIVLHGRLRNADEYYISANNAQA 92 Query: 94 AAGDAGEHALMIAPQFLIESDVEAFKLPAETLRWSLYGWQGGEPALAPSPASSFEALDAI 153 AAGD G+ ALMI PQFL E D+EA KL +TLRWSL GW+GG+ ALAP+P SSFEALDAI Sbjct: 93 AAGDDGKAALMIVPQFLAEIDIEAHKLTEDTLRWSLEGWEGGDAALAPNPVSSFEALDAI 152 Query: 154 LAKLGDRKLFPNLQQVVVFGHSGGGQVVQRYAIAVKGDKVLLRQGIGVRYVVANPSSYAY 213 LA+L DR++FPNL+QVVV GHSGGGQVVQRYAIA KG+ L RQ I VRYVVANPSSYAY Sbjct: 153 LARLADRRVFPNLKQVVVAGHSGGGQVVQRYAIAGKGETALSRQHIDVRYVVANPSSYAY 212 Query: 214 FTKERPEAAIAANCHGYNSWKFGMDSRPPYLAEPSSAALEQAYVARRVIYLLGTLDTNPN 273 F+ +RP AIAA+C GYN+WK+GM RPPYLA+ + AALEQ YV R VIYLLGTLDTNP Sbjct: 213 FSADRPVPAIAASCPGYNNWKYGMGDRPPYLADATPAALEQRYVEREVIYLLGTLDTNPK 272 Query: 274 HPALDKSCMAEAEGPYRYARGHSYAAAMQARDEGTPNHRVWDVPGVGHAGGKMLNSPCGL 333 H ALDKSCMAEA+GPYRYARGH+Y AM RD GTPNHRVWDVPGVGH G KML S CGL Sbjct: 273 HSALDKSCMAEAQGPYRYARGHAYVDAMAKRDHGTPNHRVWDVPGVGHDGDKMLTSKCGL 332 Query: 334 TAVFDIPGCEAAR 346 A+FDIPGC A R Sbjct: 333 AALFDIPGCGAER 345 >ref|YP_001243279.1| hypothetical protein BBta_7522 [Bradyrhizobium sp. BTAi1] gb|ABQ39373.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 339 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 213/332 (64%), Positives = 247/332 (74%), Gaps = 2/332 (0%) Query: 12 LLVVAAAHGPAASATQAQTERDLKPVKEIANARLAVGN-ASFPLYLSADWSSPLPDVTRA 70 LL A A G A A Q +T + +PV +A+ R AVG+ PLY+S W+ LPDVTRA Sbjct: 5 LLFAAVALGRLAVA-QDETAPNRRPVAIVADQRFAVGDRGVLPLYVSRPWTETLPDVTRA 63 Query: 71 VLVLHGVLRNADDYFRAALSAQAAAGDAGEHALMIAPQFLIESDVEAFKLPAETLRWSLY 130 V+VLHG LRNAD YF A AQAAAG AG L+I PQFL ++DVE LPA+TLRW+L Sbjct: 64 VVVLHGRLRNADAYFETAKKAQAAAGAAGATTLLIVPQFLAQADVEFHHLPADTLRWTLT 123 Query: 131 GWQGGEPALAPSPASSFEALDAILAKLGDRKLFPNLQQVVVFGHSGGGQVVQRYAIAVKG 190 GWQGG+ AL P P SSFEALDAILA+L +R LFP L VV+ GHSGG QVVQRYAI +G Sbjct: 124 GWQGGDAALGPQPVSSFEALDAILAQLANRALFPALTDVVIAGHSGGAQVVQRYAIGARG 183 Query: 191 DKVLLRQGIGVRYVVANPSSYAYFTKERPEAAIAANCHGYNSWKFGMDSRPPYLAEPSSA 250 L +Q I VRYVVANPSSYAYF+ ERPE AIAA C GY+SWKFGM RPPYLA + A Sbjct: 184 GAALAQQHIAVRYVVANPSSYAYFSAERPEPAIAAACPGYDSWKFGMVDRPPYLAGATPA 243 Query: 251 ALEQAYVARRVIYLLGTLDTNPNHPALDKSCMAEAEGPYRYARGHSYAAAMQARDEGTPN 310 LE+AYVAR +IYLLGT D +P+HPALDKSCMAEA+GP RY RGH+YAA M AR GTP+ Sbjct: 244 ELERAYVARNLIYLLGTRDIDPHHPALDKSCMAEAQGPTRYVRGHAYAAMMAARPGGTPH 303 Query: 311 HRVWDVPGVGHAGGKMLNSPCGLTAVFDIPGC 342 HR+WDV GVGH G +M S CGL A+FD+PGC Sbjct: 304 HRLWDVNGVGHNGDRMFTSACGLQALFDLPGC 335 >ref|YP_001890286.1| hypothetical protein Bphyt_6617 [Burkholderia phytofirmans PsJN] gb|ACD20915.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length = 358 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 179/349 (51%), Positives = 221/349 (63%), Gaps = 17/349 (4%) Query: 12 LLVVAAAHGPAASATQAQT-------ERDLKPVKEIANARLAV----GNASFPLYLSADW 60 L V+ A+ G A T AQ+ E LKPV I++AR + G A FPLYLS DW Sbjct: 9 LAVLCASTGAAVLMTFAQSALAVHAYEPHLKPVATISDARFTLDTPKGQAEFPLYLSKDW 68 Query: 61 SSPLPDVTRAVLVLHGVLRNADDYFRAALSAQAAAGDAGEHALMIAPQFLIESDVEAFKL 120 + P VTRAV+V+HG LRNAD YFR A +A+ AA + L+IAPQFL D Sbjct: 69 NVAQPQVTRAVIVIHGKLRNADVYFRTAQNARDAAHADPDATLLIAPQFLATLDTRVHDE 128 Query: 121 PAETLRWSLYGWQGGEPALAPSPASSFEALDAILAKLGDRKLFPNLQQVVVFGHSGGGQV 180 PA+ LRW+ W GGE A AP P SS+E LDAI+A+L DRKLFPNL+ VV GHSGGGQV Sbjct: 129 PADLLRWTGDAWMGGEAARAPLPISSYEVLDAIVARLADRKLFPNLRHVVFAGHSGGGQV 188 Query: 181 VQRYAIAVKGDKVLLRQGIGVRYVVANPSSYAYFTKERPEAA------IAANCHGYNSWK 234 VQRYA+A + L +GI VRYVVA+PS+YAYF +RP A AA C +N WK Sbjct: 189 VQRYAVAARNIAALTGEGIDVRYVVASPSTYAYFDAQRPNAQGIAAPFDAAQCPDFNQWK 248 Query: 235 FGMDSRPPYLAEPSSAALEQAYVARRVIYLLGTLDTNPNHPALDKSCMAEAEGPYRYARG 294 +GMD+RPPYL + + A LE Y ARR+ YL+G D +P ALD++C AEA+GP R AR Sbjct: 249 YGMDNRPPYLDDRTPAQLEATYAARRIDYLVGGADDDPQQSALDRTCAAEAQGPQRVARA 308 Query: 295 HSYAAAMQARDEGTPNHRVWDVPGVGHAGGKMLNSPCGLTAVFDIPGCE 343 +Y +Q+R VPGVGH G +ML S C L+A+FD PGCE Sbjct: 309 EAYYRYIQSRHPDGLKQSFHIVPGVGHNGARMLTSVCALSAMFDTPGCE 357 >ref|YP_552737.1| hypothetical protein Bxe_B2606 [Burkholderia xenovorans LB400] gb|ABE33387.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 358 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 180/349 (51%), Positives = 218/349 (62%), Gaps = 17/349 (4%) Query: 12 LLVVAAAHGPAASATQAQT-------ERDLKPVKEIANARLAV----GNASFPLYLSADW 60 L V+ AA G A T AQ E LKPV +++ R + G+A FPLYLS DW Sbjct: 9 LAVLCAATGAALLMTLAQPAFAVHAYEPHLKPVATVSDTRFTLDTPQGHAEFPLYLSKDW 68 Query: 61 SSPLPDVTRAVLVLHGVLRNADDYFRAALSAQAAAGDAGEHALMIAPQFLIESDVEAFKL 120 S P VTRAV+V+HG LRNAD YFR A A+ AA + L+IAPQFL D Sbjct: 69 SVAQPQVTRAVIVIHGKLRNADVYFRTAQKARDAAHADPDATLLIAPQFLATLDTRVHDE 128 Query: 121 PAETLRWSLYGWQGGEPALAPSPASSFEALDAILAKLGDRKLFPNLQQVVVFGHSGGGQV 180 PA+ LRWS W GG+ A AP P SS+E LDAI+A+L DRKLFPNL+ VV GHSGGGQV Sbjct: 129 PADLLRWSGDAWMGGDAAQAPLPISSYEVLDAIVARLADRKLFPNLRHVVFAGHSGGGQV 188 Query: 181 VQRYAIAVKGDKVLLRQGIGVRYVVANPSSYAYFTKERPEAA------IAANCHGYNSWK 234 VQRYA+A + L +GI VRYVVA+PS+YAYF +RP A AA C +N WK Sbjct: 189 VQRYAVAGRNIAALTDEGIDVRYVVASPSTYAYFDAQRPNAQGVAAPFDAAQCPDFNQWK 248 Query: 235 FGMDSRPPYLAEPSSAALEQAYVARRVIYLLGTLDTNPNHPALDKSCMAEAEGPYRYARG 294 +GMD+RPPYL + + A LE Y ARR+ YL+G D +P ALDK+C AEA+GP R AR Sbjct: 249 YGMDNRPPYLGDRTPAQLEATYAARRIDYLVGGADDDPQQNALDKTCAAEAQGPQRVARA 308 Query: 295 HSYAAAMQARDEGTPNHRVWDVPGVGHAGGKMLNSPCGLTAVFDIPGCE 343 +Y +Q+R R VPGVGH G +ML S C L A+FD GCE Sbjct: 309 EAYYRYIQSRHPHGLKQRFHIVPGVGHNGSRMLTSVCALAAMFDTQGCE 357 >ref|ZP_06842570.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gb|EFG69758.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length = 358 Score = 328 bits (841), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 177/349 (50%), Positives = 218/349 (62%), Gaps = 17/349 (4%) Query: 12 LLVVAAAHGPAASATQAQT-------ERDLKPVKEIANARLAV----GNASFPLYLSADW 60 L V+ AA G A T AQ E LKPV +++ R + G+A FPLYLS DW Sbjct: 9 LAVLCAATGAALLMTLAQPALAVHAYEPHLKPVATVSDTRFTLDTPQGHAEFPLYLSKDW 68 Query: 61 SSPLPDVTRAVLVLHGVLRNADDYFRAALSAQAAAGDAGEHALMIAPQFLIESDVEAFKL 120 + P VTRAV+V+HG LRNAD YFR A A+ AA + L+IAPQFL D Sbjct: 69 NVAQPQVTRAVIVIHGKLRNADVYFRTAQKARDAAHADPDATLLIAPQFLATLDTRVHDE 128 Query: 121 PAETLRWSLYGWQGGEPALAPSPASSFEALDAILAKLGDRKLFPNLQQVVVFGHSGGGQV 180 PA+ LRW+ W GGE A +P P SS+E LDAI+A+L DRKLFPNL+ VV GHSGGGQV Sbjct: 129 PADLLRWTGDAWMGGEAAQSPLPISSYEVLDAIVARLADRKLFPNLRHVVFAGHSGGGQV 188 Query: 181 VQRYAIAVKGDKVLLRQGIGVRYVVANPSSYAYFTKERPEAA------IAANCHGYNSWK 234 VQRYA+A + L +GI VRYVVA+PS+YAYF +RP A AA C +N WK Sbjct: 189 VQRYAVAGRNIAALTDEGIDVRYVVASPSTYAYFDAQRPNAQGVAAPFDAAQCPDFNQWK 248 Query: 235 FGMDSRPPYLAEPSSAALEQAYVARRVIYLLGTLDTNPNHPALDKSCMAEAEGPYRYARG 294 +GMD+RPPYL + + A LE Y ARR+ YL+G D +P ALDK+C AEA+GP R AR Sbjct: 249 YGMDNRPPYLGDRTPAQLEATYAARRIDYLVGGADDDPQQNALDKTCAAEAQGPQRVARA 308 Query: 295 HSYAAAMQARDEGTPNHRVWDVPGVGHAGGKMLNSPCGLTAVFDIPGCE 343 +Y +++R R VPGVGH G +ML S C L A+FD GCE Sbjct: 309 EAYYRYIRSRHPDGLKQRFHIVPGVGHNGSRMLTSVCALAAMFDTQGCE 357