BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0221.p (358 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_571650.1| hypothetical protein Nham_4195 [Nitrobacter ham... 541 e-152 ref|YP_002288147.1| NADPH-dependent fmn reductase [Oligotropha c... 504 e-141 gb|EGE56221.1| hypothetical protein RHECNPAF_730019 [Rhizobium e... 475 e-132 ref|YP_001985151.1| hypothetical protein RHECIAT_PC0000523 [Rhiz... 474 e-132 ref|ZP_03524376.1| hypothetical protein RetlG_26256 [Rhizobium e... 470 e-130 >ref|YP_571650.1| hypothetical protein Nham_4195 [Nitrobacter hamburgensis X14] gb|ABE64818.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 327 Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust. Identities = 252/327 (77%), Positives = 281/327 (85%) Query: 32 VFQSMQTELATIIAGAWDAYRHSRKAPVTRKAGPGFADPDYDLAVDWLSARDAIDEAQRR 91 +F + EL TIIA AWDAY HSRK+P TRKAG GFADPDYDLAVDWL ARDAID+AQ+R Sbjct: 1 MFSPLGRELDTIIAAAWDAYSHSRKSPATRKAGAGFADPDYDLAVDWLKARDAIDQAQQR 60 Query: 92 HDDPNEAPHILLINGSSRSEHTCPGEMSKSWRLVEIAEAAFREMGLAVDVLDLSRLTSEF 151 +DD + ILLINGSSRSEHTCPGEMSK+WR+VEIA++ F EMG VDVL+LSRL SEF Sbjct: 61 YDDTGLSLRILLINGSSRSEHTCPGEMSKTWRMVEIAKSCFVEMGFDVDVLNLSRLASEF 120 Query: 152 GREIHPCKSCVSTSMALCHWPCSCYPNYSLGQTDDWMNEIYPLWVRAHGIMIISPVNWYQ 211 G++IHPCKSC STSMALCHWPCSCYPNYSLGQTDDWMNEIYPLWV AHGIMI++PVNWYQ Sbjct: 121 GKQIHPCKSCASTSMALCHWPCSCYPNYSLGQTDDWMNEIYPLWVAAHGIMIVTPVNWYQ 180 Query: 212 TPTGLKAMIDRLVCADGGNPDPTSTHGKTASEAKALELKGWPYPKHLRGRHFGIVVHGDS 271 PT LKAMIDRLVCADGGNPDP+STHGKT SEAK LEL+GWPYP+HL GRHFG++VHGDS Sbjct: 181 APTALKAMIDRLVCADGGNPDPSSTHGKTVSEAKELELRGWPYPRHLAGRHFGLIVHGDS 240 Query: 272 VGAETCRRFLADWLTDMELISAGGRAEIDGYVGYMKPYAMSHRDLDDDRAFQEQVRNVAL 331 +GAET RR L+DWLTDM+LISAG AE DGYVGYMKPYA SH + D D AFQE+V N A Sbjct: 241 IGAETLRRSLSDWLTDMKLISAGNMAECDGYVGYMKPYATSHEEFDKDTAFQEEVGNAAR 300 Query: 332 ALGAAVDLARTGHLEDPGKGLEDPRPK 358 ALGAAV LAR G L++P +GL DP PK Sbjct: 301 ALGAAVRLARAGRLDNPAEGLSDPVPK 327 >ref|YP_002288147.1| NADPH-dependent fmn reductase [Oligotropha carboxidovorans OM5] ref|YP_004633751.1| hypothetical protein OCA5_c28180 [Oligotropha carboxidovorans OM5] gb|ACI92282.1| NADPH-dependent fmn reductase [Oligotropha carboxidovorans OM5] gb|AEI03933.1| hypothetical protein OCA4_c28170 [Oligotropha carboxidovorans OM4] gb|AEI07510.1| hypothetical protein OCA5_c28180 [Oligotropha carboxidovorans OM5] Length = 358 Score = 504 bits (1298), Expect = e-141, Method: Compositional matrix adjust. Identities = 251/358 (70%), Positives = 290/358 (81%) Query: 1 MTEPDVRKGMPPVKLSRDEFERRYRKRFADPVFQSMQTELATIIAGAWDAYRHSRKAPVT 60 M + DVRKGMPPVKLSR +FERR+ +F DP F +Q EL+ I+ AWDAY HSRK+P+ Sbjct: 1 MADIDVRKGMPPVKLSRADFERRFLDQFVDPAFAPLQHELSAIVEAAWDAYDHSRKSPLI 60 Query: 61 RKAGPGFADPDYDLAVDWLSARDAIDEAQRRHDDPNEAPHILLINGSSRSEHTCPGEMSK 120 RKAGPGF+DPDYDLA+DWL+AR AI AQ RHDDPNEA ILLINGS RSEHTCPGEMSK Sbjct: 61 RKAGPGFSDPDYDLAIDWLNARAAIAAAQARHDDPNEAMRILLINGSPRSEHTCPGEMSK 120 Query: 121 SWRLVEIAEAAFREMGLAVDVLDLSRLTSEFGREIHPCKSCVSTSMALCHWPCSCYPNYS 180 +WRLVE+A + F + G VD+LDLSR SE+ + IHPCK+CVST+M LCHWPCSCYPNYS Sbjct: 121 TWRLVELARSVFVQEGFIVDLLDLSRQVSEYDKHIHPCKACVSTAMPLCHWPCSCYPNYS 180 Query: 181 LGQTDDWMNEIYPLWVRAHGIMIISPVNWYQTPTGLKAMIDRLVCADGGNPDPTSTHGKT 240 LGQT+DWMNEIYPLWV AHGIMI++PV+WYQTPT LKAMIDRLVCADGGNPDPTSTHGK Sbjct: 181 LGQTNDWMNEIYPLWVGAHGIMIVTPVHWYQTPTTLKAMIDRLVCADGGNPDPTSTHGKR 240 Query: 241 ASEAKALELKGWPYPKHLRGRHFGIVVHGDSVGAETCRRFLADWLTDMELISAGGRAEID 300 A+EAKA+EL GW YPKHL GRHF +V HGD+VGAE RR L DWLTDM L+ A AE+D Sbjct: 241 AAEAKAIELAGWDYPKHLEGRHFAVVAHGDAVGAEGVRRSLCDWLTDMSLVGATRTAEVD 300 Query: 301 GYVGYMKPYAMSHRDLDDDRAFQEQVRNVALALGAAVDLARTGHLEDPGKGLEDPRPK 358 GY+GYM+PYA SH+ LD D AFQ+Q +N A AL A+ LAR G + P +ED RPK Sbjct: 301 GYIGYMEPYATSHQALDHDEAFQQQTQNAAQALANAIRLARAGTYQRPDDDIEDARPK 358 >gb|EGE56221.1| hypothetical protein RHECNPAF_730019 [Rhizobium etli CNPAF512] Length = 414 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 220/353 (62%), Positives = 270/353 (76%), Gaps = 1/353 (0%) Query: 7 RKGMPPVKLSRDEFERRYRKRFADPVFQSMQTELATIIAGAWDAYRHSRKAPVTRKAGPG 66 RKG P +L EF+RR+ +F DP + +Q ELA + + AW+AY +SRK+P TRKAGPG Sbjct: 62 RKGSPSPRLDEPEFKRRFLNQFRDPAYGKLQEELAKLASAAWEAYANSRKSPKTRKAGPG 121 Query: 67 FADPDYDLAVDWLSARDAIDEAQRRHDDPNEAPHILLINGSSRSEHTCPGEMSKSWRLVE 126 FADPDYDLA DWL+ARDAI +AQ+RHDDPN +LL+NGS+RSEHTCPGE+SKS+R+V+ Sbjct: 122 FADPDYDLAEDWLAARDAIRDAQKRHDDPNGPTRLLLVNGSTRSEHTCPGEISKSYRMVD 181 Query: 127 IA-EAAFREMGLAVDVLDLSRLTSEFGREIHPCKSCVSTSMALCHWPCSCYPNYSLGQTD 185 IA E ++ + ++VLDLSRL SE+GR+IHPCK+C ST+ ALCHWPCSCYPNYSLGQ Sbjct: 182 IAREVLEQQRHVKIEVLDLSRLASEYGRQIHPCKACFSTAAALCHWPCSCYPNYSLGQIH 241 Query: 186 DWMNEIYPLWVRAHGIMIISPVNWYQTPTGLKAMIDRLVCADGGNPDPTSTHGKTASEAK 245 DWMNEIYP+WV AHGIMI++PV+WYQ P+ LK MIDRLVCADGGNPDPTSTHGK A +AK Sbjct: 242 DWMNEIYPMWVEAHGIMIVTPVHWYQAPSSLKLMIDRLVCADGGNPDPTSTHGKHADQAK 301 Query: 246 ALELKGWPYPKHLRGRHFGIVVHGDSVGAETCRRFLADWLTDMELISAGGRAEIDGYVGY 305 LE+ GWPYP+HL GR F +VVHGD+ GAE RR L+DWL M+LI AG AE+D Y+GY Sbjct: 302 QLEMNGWPYPRHLEGRLFSVVVHGDTEGAEDVRRNLSDWLRSMDLIPAGPLAEVDRYIGY 361 Query: 306 MKPYAMSHRDLDDDRAFQEQVRNVALALGAAVDLARTGHLEDPGKGLEDPRPK 358 +PYA SH + + D+A QE++RN L A R G G GL PR K Sbjct: 362 WEPYATSHVNYEKDQAMQEEIRNAGRTLYEAATAKRQGRQIAAGAGLRQPRQK 414 >ref|YP_001985151.1| hypothetical protein RHECIAT_PC0000523 [Rhizobium etli CIAT 652] gb|ACE94601.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 367 Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust. Identities = 220/353 (62%), Positives = 270/353 (76%), Gaps = 1/353 (0%) Query: 7 RKGMPPVKLSRDEFERRYRKRFADPVFQSMQTELATIIAGAWDAYRHSRKAPVTRKAGPG 66 RKG P +L EF+RR+ +F DP + +Q ELA + + AW+AY +SRK+P TRKAGPG Sbjct: 15 RKGSPSPRLDEPEFKRRFLNQFRDPAYGKLQEELAKLASAAWEAYANSRKSPKTRKAGPG 74 Query: 67 FADPDYDLAVDWLSARDAIDEAQRRHDDPNEAPHILLINGSSRSEHTCPGEMSKSWRLVE 126 FADPDYDLA DWL+ARDAI +AQ+RHDDPN +LL+NGS+RSEHTCPGE+SKS+R+V+ Sbjct: 75 FADPDYDLAEDWLAARDAIRDAQKRHDDPNGPTRLLLVNGSTRSEHTCPGEISKSYRMVD 134 Query: 127 IA-EAAFREMGLAVDVLDLSRLTSEFGREIHPCKSCVSTSMALCHWPCSCYPNYSLGQTD 185 IA E ++ + ++VLDLSRL SE+GR+IHPCK+C ST+ ALCHWPCSCYPNYSLGQ Sbjct: 135 IAREVLEQQRHVKIEVLDLSRLASEYGRQIHPCKACFSTAAALCHWPCSCYPNYSLGQIH 194 Query: 186 DWMNEIYPLWVRAHGIMIISPVNWYQTPTGLKAMIDRLVCADGGNPDPTSTHGKTASEAK 245 DWMNEIYP+WV AHGIMI++PV+WYQ P+ LK MIDRLVCADGGNPDPTSTHGK A +AK Sbjct: 195 DWMNEIYPMWVEAHGIMIVTPVHWYQAPSSLKLMIDRLVCADGGNPDPTSTHGKHADQAK 254 Query: 246 ALELKGWPYPKHLRGRHFGIVVHGDSVGAETCRRFLADWLTDMELISAGGRAEIDGYVGY 305 LE+ GWPYP+HL GR F +VVHGD+ GAE RR L+DWL M+LI AG AE+D Y+GY Sbjct: 255 QLEMNGWPYPRHLEGRLFSVVVHGDTEGAEDVRRNLSDWLRSMDLIPAGPLAEVDRYIGY 314 Query: 306 MKPYAMSHRDLDDDRAFQEQVRNVALALGAAVDLARTGHLEDPGKGLEDPRPK 358 +PYA SH + + D+A QE++RN L A R G G GL PR K Sbjct: 315 WEPYATSHVNYEKDQAMQEEIRNAGRTLYDAATAKRQGRQIAAGAGLRQPRQK 367 >ref|ZP_03524376.1| hypothetical protein RetlG_26256 [Rhizobium etli GR56] Length = 367 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 219/353 (62%), Positives = 269/353 (76%), Gaps = 1/353 (0%) Query: 7 RKGMPPVKLSRDEFERRYRKRFADPVFQSMQTELATIIAGAWDAYRHSRKAPVTRKAGPG 66 RKG P +L EF+RR+ +F DP + +Q ELA + + AW+AY +SRK+P TRKAGPG Sbjct: 15 RKGSPSPRLDEHEFKRRFLNQFQDPAYGKLQEELAKLASAAWEAYANSRKSPKTRKAGPG 74 Query: 67 FADPDYDLAVDWLSARDAIDEAQRRHDDPNEAPHILLINGSSRSEHTCPGEMSKSWRLVE 126 FADPDYDLA DWL+ARDAI +AQ+RHDDPN +LL+NGS+RSEHTCPGE+SKS+R+V+ Sbjct: 75 FADPDYDLAEDWLAARDAIRDAQKRHDDPNGPTRLLLVNGSTRSEHTCPGEISKSYRMVD 134 Query: 127 IA-EAAFREMGLAVDVLDLSRLTSEFGREIHPCKSCVSTSMALCHWPCSCYPNYSLGQTD 185 IA E ++ + +++LDLSRL SE+GR+IHPCK+C ST+ ALCHWPCSCYPNYSLGQ Sbjct: 135 IAREVLEQQRHVNIEILDLSRLASEYGRQIHPCKACFSTAAALCHWPCSCYPNYSLGQIH 194 Query: 186 DWMNEIYPLWVRAHGIMIISPVNWYQTPTGLKAMIDRLVCADGGNPDPTSTHGKTASEAK 245 DWMNEIYP+WV AHGIMI++PV+WYQ P+ LK MIDR VCADGGNPDPTSTHGK A +AK Sbjct: 195 DWMNEIYPMWVEAHGIMIVTPVHWYQAPSSLKLMIDRPVCADGGNPDPTSTHGKHADQAK 254 Query: 246 ALELKGWPYPKHLRGRHFGIVVHGDSVGAETCRRFLADWLTDMELISAGGRAEIDGYVGY 305 LE+ GWPYP+HL GR F +VVHGD+ G+E RR L+DWL M+LI AG AEID Y+GY Sbjct: 255 QLEMNGWPYPRHLEGRLFSVVVHGDTEGSEGVRRNLSDWLRSMDLIPAGPLAEIDRYIGY 314 Query: 306 MKPYAMSHRDLDDDRAFQEQVRNVALALGAAVDLARTGHLEDPGKGLEDPRPK 358 +PYA SH + D+A QE++RN A L A R G G GL PR K Sbjct: 315 WEPYATSHAAYEKDQAMQEEIRNAARTLYEAAAARRQGGQIAAGAGLRQPRQK 367