BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0212.p (380 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766827.1| 3-dehydroquinate synthase [Bradyrhizobium japon... 678 0.0 ref|YP_001243325.1| 3-dehydroquinate synthase [Bradyrhizobium sp... 644 0.0 ref|YP_001202785.1| bifunctional shikimate kinase/dehydroquinate... 640 0.0 ref|NP_945856.1| 3-dehydroquinate synthase [Rhodopseudomonas pal... 625 e-177 ref|YP_530427.1| 3-dehydroquinate synthase [Rhodopseudomonas pal... 624 e-177 >ref|NP_766827.1| 3-dehydroquinate synthase [Bradyrhizobium japonicum USDA 110] sp|Q89XW8.1|AROB_BRAJA RecName: Full=3-dehydroquinate synthase dbj|BAC45452.1| 3-dehydroquinate synthase [Bradyrhizobium japonicum USDA 110] Length = 382 Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/378 (88%), Positives = 354/378 (93%) Query: 1 MTAPLKHSASVTVDVALGDRAYDIVIGRGVLQSLGERVAALRPGVRTAIVTDRTVAKHWL 60 MTAPLKHS V VDVALGDRAYDIVIGRGVL SLGERVAALRPGVRTA+VTDRTVAKHWL Sbjct: 1 MTAPLKHSDPVNVDVALGDRAYDIVIGRGVLASLGERVAALRPGVRTAVVTDRTVAKHWL 60 Query: 61 EPTEASLAAAGVPTSRIVVEEGEGSKSYATLTEVSEALIAAKIERNDLVIALGGGVVGDL 120 EPTEASLAAAG+PTSRIVVEEGE SK+YA L +VSEALIAAKIERNDLVIALGGGVVGDL Sbjct: 61 EPTEASLAAAGIPTSRIVVEEGEISKTYAGLEKVSEALIAAKIERNDLVIALGGGVVGDL 120 Query: 121 AGFAAAILRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNLIGAFHQPVLVIADTSVL 180 AGFAAAILRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNL+GAFHQPVLVIADT+VL Sbjct: 121 AGFAAAILRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNLLGAFHQPVLVIADTAVL 180 Query: 181 DTLSPRQFRAGYAEVAKYGILGDEAFFAWLEKNHADIFAGGAGREHAIATSCRAKAGVVS 240 DTLSPRQF AGYAEVAKYG+LGDEAFF WLEKNH+DIF GG+ REHAIATSCRAKAG+VS Sbjct: 181 DTLSPRQFHAGYAEVAKYGVLGDEAFFTWLEKNHSDIFKGGSAREHAIATSCRAKAGIVS 240 Query: 241 RDERETGERALLNLGHTFGHALEAATGFSDRLFHGEGVAVGMVLAAEFSAQLGMISSDDA 300 RDERETGERALLNLGHTFGHALEAATGFSDRLFHGEGVA+GM LAA+FSA+LGMI DA Sbjct: 241 RDERETGERALLNLGHTFGHALEAATGFSDRLFHGEGVAIGMTLAAQFSAKLGMIGEADA 300 Query: 301 GRIARHLSAVGLPTRLQDIAGFAQEGLADADTLLALMAQDKKVKRGKLTFILLEAVGRAV 360 R+ RHL GLPTRLQDIAGF+QEGLADAD L+ALMAQDKKVKRGKLTFILLEAVGRAV Sbjct: 301 ARVERHLIEAGLPTRLQDIAGFSQEGLADADALMALMAQDKKVKRGKLTFILLEAVGRAV 360 Query: 361 IANNVEPQPVRDFLQAKL 378 IA +VEP PVRDFL+ KL Sbjct: 361 IAKDVEPAPVRDFLKEKL 378 >ref|YP_001243325.1| 3-dehydroquinate synthase [Bradyrhizobium sp. BTAi1] sp|A5ETC5.1|AROB_BRASB RecName: Full=3-dehydroquinate synthase gb|ABQ39419.1| 3-dehydroquinate synthase [Bradyrhizobium sp. BTAi1] Length = 382 Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/378 (84%), Positives = 346/378 (91%) Query: 1 MTAPLKHSASVTVDVALGDRAYDIVIGRGVLQSLGERVAALRPGVRTAIVTDRTVAKHWL 60 MTAPLK + VDVALG+RAYDIVIGRGVL SLG+R+AALRPGVRTAIVTDRTVA HWL Sbjct: 1 MTAPLKTFDPIIVDVALGERAYDIVIGRGVLASLGQRIAALRPGVRTAIVTDRTVAAHWL 60 Query: 61 EPTEASLAAAGVPTSRIVVEEGEGSKSYATLTEVSEALIAAKIERNDLVIALGGGVVGDL 120 +PTEA LA AG+P+S IVVEEGEGSK+YA L +VSEALIAAKIERNDLVIALGGGVVGDL Sbjct: 61 KPTEAILAEAGIPSSTIVVEEGEGSKTYAGLEKVSEALIAAKIERNDLVIALGGGVVGDL 120 Query: 121 AGFAAAILRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNLIGAFHQPVLVIADTSVL 180 AGFAAAILRRGV+FVQVPTSLLAQVDSSVGGKTGINSPQGKNL+GAFHQPVLVIADT+VL Sbjct: 121 AGFAAAILRRGVNFVQVPTSLLAQVDSSVGGKTGINSPQGKNLLGAFHQPVLVIADTAVL 180 Query: 181 DTLSPRQFRAGYAEVAKYGILGDEAFFAWLEKNHADIFAGGAGREHAIATSCRAKAGVVS 240 DTLSPRQFRAGYAEVAKYG+LGD FF WLE NHADI GGA REHA+ATSCRAKA +V+ Sbjct: 181 DTLSPRQFRAGYAEVAKYGLLGDAGFFTWLEANHADIVTGGAAREHAVATSCRAKAAIVA 240 Query: 241 RDERETGERALLNLGHTFGHALEAATGFSDRLFHGEGVAVGMVLAAEFSAQLGMISSDDA 300 RDERETG+RALLNLGHTFGHALEA TGFSDRLFHGEGVAVGMVLAA+FSA+LGM+ DD Sbjct: 241 RDERETGDRALLNLGHTFGHALEAITGFSDRLFHGEGVAVGMVLAAQFSAELGMLPPDDV 300 Query: 301 GRIARHLSAVGLPTRLQDIAGFAQEGLADADTLLALMAQDKKVKRGKLTFILLEAVGRAV 360 RI RHL+AVGLPT LQDIAGFAQEG+ DAD LLALMAQDKKVKRGKLTFIL+EA+GRAV Sbjct: 301 TRIERHLAAVGLPTHLQDIAGFAQEGIGDADRLLALMAQDKKVKRGKLTFILMEAIGRAV 360 Query: 361 IANNVEPQPVRDFLQAKL 378 IA +V+P VRDFLQAKL Sbjct: 361 IAKDVDPARVRDFLQAKL 378 >ref|YP_001202785.1| bifunctional shikimate kinase/dehydroquinate synthase [Bradyrhizobium sp. ORS 278] emb|CAL74545.1| bifunctional: shikimate kinase (N-terminal); dehydroquinate synthase (C-terminal) [Bradyrhizobium sp. ORS 278] Length = 600 Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/378 (83%), Positives = 346/378 (91%) Query: 1 MTAPLKHSASVTVDVALGDRAYDIVIGRGVLQSLGERVAALRPGVRTAIVTDRTVAKHWL 60 MTAPLK S + VDVALG+RAYDIVIGRGVL +LG R+AALRPGVRTAIVTDRTVA HWL Sbjct: 219 MTAPLKSSDPIIVDVALGERAYDIVIGRGVLDTLGRRIAALRPGVRTAIVTDRTVAAHWL 278 Query: 61 EPTEASLAAAGVPTSRIVVEEGEGSKSYATLTEVSEALIAAKIERNDLVIALGGGVVGDL 120 +PTEA LA AG+P+S IVVEEGEGSK+YA L +VSEALI+AKIERNDLVIALGGGVVGDL Sbjct: 279 KPTEAILAEAGIPSSTIVVEEGEGSKTYAGLEKVSEALISAKIERNDLVIALGGGVVGDL 338 Query: 121 AGFAAAILRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNLIGAFHQPVLVIADTSVL 180 AGFAA+ILRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNL+GAFHQPVLVIADT+VL Sbjct: 339 AGFAASILRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNLLGAFHQPVLVIADTAVL 398 Query: 181 DTLSPRQFRAGYAEVAKYGILGDEAFFAWLEKNHADIFAGGAGREHAIATSCRAKAGVVS 240 DTLSPRQFRAGYAEVAKYG+LGD FFAWLE N A+I GGA REHA+ATSCRAKA +V+ Sbjct: 399 DTLSPRQFRAGYAEVAKYGLLGDAGFFAWLEANQAEIVTGGAAREHAVATSCRAKAAIVA 458 Query: 241 RDERETGERALLNLGHTFGHALEAATGFSDRLFHGEGVAVGMVLAAEFSAQLGMISSDDA 300 RDERETG+RALLNLGHTFGHALEA TGFSDRLFHGEGV+VGMVLAA+FSA+LGM+ D Sbjct: 459 RDERETGDRALLNLGHTFGHALEAITGFSDRLFHGEGVSVGMVLAAQFSAELGMLPPGDV 518 Query: 301 GRIARHLSAVGLPTRLQDIAGFAQEGLADADTLLALMAQDKKVKRGKLTFILLEAVGRAV 360 RI RHL+AVGLPT LQDIAGFAQEG+ DA+ LLALMAQDKKVKRGKLTFIL+EA+GRAV Sbjct: 519 TRIERHLAAVGLPTHLQDIAGFAQEGIGDAERLLALMAQDKKVKRGKLTFILMEAIGRAV 578 Query: 361 IANNVEPQPVRDFLQAKL 378 IAN+V+P VRDFLQAKL Sbjct: 579 IANDVDPARVRDFLQAKL 596 >ref|NP_945856.1| 3-dehydroquinate synthase [Rhodopseudomonas palustris CGA009] sp|Q6NCG9.1|AROB_RHOPA RecName: Full=3-dehydroquinate synthase emb|CAE25947.1| putative 3-dehydroquinate synthase [Rhodopseudomonas palustris CGA009] Length = 381 Score = 625 bits (1611), Expect = e-177, Method: Compositional matrix adjust. Identities = 304/378 (80%), Positives = 341/378 (90%) Query: 1 MTAPLKHSASVTVDVALGDRAYDIVIGRGVLQSLGERVAALRPGVRTAIVTDRTVAKHWL 60 M AP KHSA +TV+VALGDRAY+IVIGR V+ SLGER+A LRPG RTAIVTDRTVAK WL Sbjct: 1 MNAPQKHSAPITVEVALGDRAYEIVIGRDVIASLGERIAKLRPGARTAIVTDRTVAKTWL 60 Query: 61 EPTEASLAAAGVPTSRIVVEEGEGSKSYATLTEVSEALIAAKIERNDLVIALGGGVVGDL 120 + TE L AG+ + ++V EGE SKSYA L +V EALIAAKIERNDLVIALGGGV+GDL Sbjct: 61 KRTEEVLDQAGIAHASVIVGEGESSKSYAGLEQVCEALIAAKIERNDLVIALGGGVIGDL 120 Query: 121 AGFAAAILRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNLIGAFHQPVLVIADTSVL 180 AGF+A++LRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNLIG FHQPVLV+ADT++L Sbjct: 121 AGFSASLLRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNLIGTFHQPVLVLADTAIL 180 Query: 181 DTLSPRQFRAGYAEVAKYGILGDEAFFAWLEKNHADIFAGGAGREHAIATSCRAKAGVVS 240 DTLSPRQFRAGYAEVAKYG LGDEAFFAWLE NHA++F+GGA REHA+ATSCRAKA +V+ Sbjct: 181 DTLSPRQFRAGYAEVAKYGALGDEAFFAWLEANHAELFSGGAAREHAVATSCRAKAAIVA 240 Query: 241 RDERETGERALLNLGHTFGHALEAATGFSDRLFHGEGVAVGMVLAAEFSAQLGMISSDDA 300 RDERETG+RALLNLGHTFGHALEAATGFSDRLFHGEGVA+GMVLAAEFSA+ GM+ + DA Sbjct: 241 RDERETGDRALLNLGHTFGHALEAATGFSDRLFHGEGVAIGMVLAAEFSAERGMMPATDA 300 Query: 301 GRIARHLSAVGLPTRLQDIAGFAQEGLADADTLLALMAQDKKVKRGKLTFILLEAVGRAV 360 R+A+HL+ VGLPTRLQDIAGF QEGLADAD L+ALMAQDKKVKRG+LTFIL+E +GRAV Sbjct: 301 ERLAKHLAEVGLPTRLQDIAGFTQEGLADADRLMALMAQDKKVKRGELTFILMEGIGRAV 360 Query: 361 IANNVEPQPVRDFLQAKL 378 IA+ VEP PVRDFLQ KL Sbjct: 361 IASKVEPAPVRDFLQRKL 378 >ref|YP_530427.1| 3-dehydroquinate synthase [Rhodopseudomonas palustris BisB18] sp|Q21BX8.1|AROB_RHOPB RecName: Full=3-dehydroquinate synthase gb|ABD86108.1| 3-dehydroquinate synthase [Rhodopseudomonas palustris BisB18] Length = 382 Score = 624 bits (1610), Expect = e-177, Method: Compositional matrix adjust. Identities = 310/378 (82%), Positives = 342/378 (90%) Query: 1 MTAPLKHSASVTVDVALGDRAYDIVIGRGVLQSLGERVAALRPGVRTAIVTDRTVAKHWL 60 MTAPL HSA +TV+VALGDR YDIVIGR VL+SLG R+AALRPG RTAIVTDR VA WL Sbjct: 1 MTAPLNHSAPITVEVALGDRGYDIVIGRDVLRSLGTRIAALRPGARTAIVTDRNVATCWL 60 Query: 61 EPTEASLAAAGVPTSRIVVEEGEGSKSYATLTEVSEALIAAKIERNDLVIALGGGVVGDL 120 T+A+L G+ + IVVE GEGSKSYA L +V EALIAAKIERNDLVIALGGGVVGDL Sbjct: 61 AQTQAALDDVGIVSMPIVVEGGEGSKSYAGLQQVCEALIAAKIERNDLVIALGGGVVGDL 120 Query: 121 AGFAAAILRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNLIGAFHQPVLVIADTSVL 180 AGFAA+I+RRG+DFVQVPTSLLAQVDSSVGGKTGINSP GKNL+GAFHQPVLVIADT+VL Sbjct: 121 AGFAASIVRRGLDFVQVPTSLLAQVDSSVGGKTGINSPHGKNLVGAFHQPVLVIADTAVL 180 Query: 181 DTLSPRQFRAGYAEVAKYGILGDEAFFAWLEKNHADIFAGGAGREHAIATSCRAKAGVVS 240 DTLSPRQFRAGYAEVAKYG LGDEAFFAWLE NHA+I GG+ REHAIATSCRAKA +V+ Sbjct: 181 DTLSPRQFRAGYAEVAKYGALGDEAFFAWLEANHAEIVRGGSAREHAIATSCRAKAAIVA 240 Query: 241 RDERETGERALLNLGHTFGHALEAATGFSDRLFHGEGVAVGMVLAAEFSAQLGMISSDDA 300 RDERETGERALLNLGHTFGHALEAATGFS+RLFHGEGVAVGMVLAA+FSA+ GM+S+D A Sbjct: 241 RDERETGERALLNLGHTFGHALEAATGFSERLFHGEGVAVGMVLAAQFSAERGMLSNDAA 300 Query: 301 GRIARHLSAVGLPTRLQDIAGFAQEGLADADTLLALMAQDKKVKRGKLTFILLEAVGRAV 360 R++ HL+ VGLPTRLQDIAGFAQEGLADAD L+ALMAQDKKVKRG+LTFILLEA+GRAV Sbjct: 301 ARLSHHLAEVGLPTRLQDIAGFAQEGLADADALMALMAQDKKVKRGRLTFILLEAIGRAV 360 Query: 361 IANNVEPQPVRDFLQAKL 378 IA++VEP+PVRDFL KL Sbjct: 361 IAHDVEPEPVRDFLARKL 378