BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0204.p (333 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766820.1| cobalt insertion protein [Bradyrhizobium japoni... 649 0.0 ref|NP_945851.1| cobalt chelatase pCobS small subunit [Rhodopseu... 640 0.0 ref|YP_001989534.1| cobalt chelatase, pCobS small subunit [Rhodo... 638 0.0 ref|YP_567428.1| cobalt chelatase, pCobS small subunit [Rhodopse... 636 e-180 ref|YP_530432.1| cobalt chelatase, pCobS small subunit [Rhodopse... 635 e-180 >ref|NP_766820.1| cobalt insertion protein [Bradyrhizobium japonicum USDA 110] dbj|BAC45445.1| cobalt insertion protein [Bradyrhizobium japonicum USDA 110] Length = 377 Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/333 (93%), Positives = 323/333 (96%), Gaps = 1/333 (0%) Query: 1 MTTAVQTKAQEPVVGLPDMKVSVRQVFGIDSDLEVPAYSEVDPHVPETDPDYRFDRATTL 60 MTTA +K +E V GLPDMKVSVRQVFGIDSDLEVPAYSEVDPHVPE D DYRFDRATTL Sbjct: 46 MTTAAMSKVEE-VSGLPDMKVSVRQVFGIDSDLEVPAYSEVDPHVPEVDSDYRFDRATTL 104 Query: 61 AILAGFAKNRRVMVTGYPGTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKDAIVVK 120 AILAGFA+NRRVMVTGY GTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKD+IVV+ Sbjct: 105 AILAGFARNRRVMVTGYHGTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKDSIVVR 164 Query: 121 DGKQVTEFRDGILPWALQHNIALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKP 180 DGKQVTEFRDGILPWALQHN+ALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKP Sbjct: 165 DGKQVTEFRDGILPWALQHNVALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKP 224 Query: 181 HPAFRLFSTANTVGLGDTSGLYHGTQQINQGQMDRWSIVTTLNYLAHDEEVEIVLAKARH 240 HP+FRLF+TANTVGLGDTSGLYHGTQQINQGQMDRWSIVTTLNYL+HDEEVEIVLAKA+H Sbjct: 225 HPSFRLFATANTVGLGDTSGLYHGTQQINQGQMDRWSIVTTLNYLSHDEEVEIVLAKAKH 284 Query: 241 YRTQEGRDIVNKMVRLADLTRNAFANGDLSTVMSPRTVITWAENSDIFNDIGFAFRVTFL 300 YRTQEGRDIVNKMVRLADLTRNAFANGDLSTVMSPRTVITWAEN+DIF DIGFAFRVTFL Sbjct: 285 YRTQEGRDIVNKMVRLADLTRNAFANGDLSTVMSPRTVITWAENADIFGDIGFAFRVTFL 344 Query: 301 NKCDELERPLVAEFYQRCFNVELPESSVNVALS 333 NKCDELERPLVAEFYQRCFN ELPES+VNVALS Sbjct: 345 NKCDELERPLVAEFYQRCFNAELPESAVNVALS 377 >ref|NP_945851.1| cobalt chelatase pCobS small subunit [Rhodopseudomonas palustris CGA009] emb|CAE25942.1| cobS protein [Rhodopseudomonas palustris CGA009] Length = 331 Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust. Identities = 305/331 (92%), Positives = 318/331 (96%), Gaps = 1/331 (0%) Query: 3 TAVQTKAQEPVVGLPDMKVSVRQVFGIDSDLEVPAYSEVDPHVPETDPDYRFDRATTLAI 62 TA T A E + GLPDMKVSVRQVFGIDSDLEVPAYSEVDPHVP+ DPDYRFDRATTLAI Sbjct: 2 TAATTTAPE-ITGLPDMKVSVRQVFGIDSDLEVPAYSEVDPHVPDVDPDYRFDRATTLAI 60 Query: 63 LAGFAKNRRVMVTGYPGTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKDAIVVKDG 122 LAGFAKNRRVMVTG+ GTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKDAIVV+DG Sbjct: 61 LAGFAKNRRVMVTGFHGTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKDAIVVRDG 120 Query: 123 KQVTEFRDGILPWALQHNIALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKPHP 182 KQVTEFRDGILPWALQHN+ALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKPHP Sbjct: 121 KQVTEFRDGILPWALQHNVALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKPHP 180 Query: 183 AFRLFSTANTVGLGDTSGLYHGTQQINQGQMDRWSIVTTLNYLAHDEEVEIVLAKARHYR 242 AFRLF+TANT+GLGDTSGLYHGTQQINQGQMDRWSIVTTLNYL HDEEVEI+LAKA+HYR Sbjct: 181 AFRLFATANTIGLGDTSGLYHGTQQINQGQMDRWSIVTTLNYLPHDEEVEIILAKAKHYR 240 Query: 243 TQEGRDIVNKMVRLADLTRNAFANGDLSTVMSPRTVITWAENSDIFNDIGFAFRVTFLNK 302 EGRDIVNKMVRLADLTRNAFANGDLSTVMSPRTVITW+EN+DIF DIGFAFRVTFLNK Sbjct: 241 NAEGRDIVNKMVRLADLTRNAFANGDLSTVMSPRTVITWSENADIFGDIGFAFRVTFLNK 300 Query: 303 CDELERPLVAEFYQRCFNVELPESSVNVALS 333 CDELERPLVAEFYQRCFN ELPESSVN+A+S Sbjct: 301 CDELERPLVAEFYQRCFNAELPESSVNIAMS 331 >ref|YP_001989534.1| cobalt chelatase, pCobS small subunit [Rhodopseudomonas palustris TIE-1] gb|ACE99058.1| cobalt chelatase, pCobS small subunit [Rhodopseudomonas palustris TIE-1] Length = 331 Score = 638 bits (1646), Expect = 0.0, Method: Compositional matrix adjust. Identities = 304/331 (91%), Positives = 318/331 (96%), Gaps = 1/331 (0%) Query: 3 TAVQTKAQEPVVGLPDMKVSVRQVFGIDSDLEVPAYSEVDPHVPETDPDYRFDRATTLAI 62 TA T A E + GLPDMKVSVRQVFGIDSDLEVPAYSEVDPHVP+ DPDYRFDRATTLAI Sbjct: 2 TAATTTAPE-ITGLPDMKVSVRQVFGIDSDLEVPAYSEVDPHVPDVDPDYRFDRATTLAI 60 Query: 63 LAGFAKNRRVMVTGYPGTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKDAIVVKDG 122 LAGFAKNRRVMVTG+ GTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKDAIVV+DG Sbjct: 61 LAGFAKNRRVMVTGFHGTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKDAIVVRDG 120 Query: 123 KQVTEFRDGILPWALQHNIALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKPHP 182 KQVTEFRDGILPWALQHN+ALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKPHP Sbjct: 121 KQVTEFRDGILPWALQHNVALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKPHP 180 Query: 183 AFRLFSTANTVGLGDTSGLYHGTQQINQGQMDRWSIVTTLNYLAHDEEVEIVLAKARHYR 242 AFRLF+TANT+GLGDTSGLYHGTQQINQGQMDRWSIVTTLNYL HDEEVEI+LAKA+HYR Sbjct: 181 AFRLFATANTIGLGDTSGLYHGTQQINQGQMDRWSIVTTLNYLPHDEEVEIILAKAKHYR 240 Query: 243 TQEGRDIVNKMVRLADLTRNAFANGDLSTVMSPRTVITWAENSDIFNDIGFAFRVTFLNK 302 EGRDIVNKMVRLADLTRNAFANGDLSTVMSPRTVITW+EN++IF DIGFAFRVTFLNK Sbjct: 241 NAEGRDIVNKMVRLADLTRNAFANGDLSTVMSPRTVITWSENAEIFGDIGFAFRVTFLNK 300 Query: 303 CDELERPLVAEFYQRCFNVELPESSVNVALS 333 CDELERPLVAEFYQRCFN ELPESSVN+A+S Sbjct: 301 CDELERPLVAEFYQRCFNAELPESSVNIAMS 331 >ref|YP_567428.1| cobalt chelatase, pCobS small subunit [Rhodopseudomonas palustris BisB5] gb|ABE37527.1| hydrogenobyrinic acid a,c-diamide cobaltochelatase [Rhodopseudomonas palustris BisB5] Length = 331 Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust. Identities = 303/331 (91%), Positives = 318/331 (96%), Gaps = 1/331 (0%) Query: 3 TAVQTKAQEPVVGLPDMKVSVRQVFGIDSDLEVPAYSEVDPHVPETDPDYRFDRATTLAI 62 TA T+AQE + GLPDMKVSVRQVFGIDSDLEVPA+SE DPHVP+ D DYRFDRATTLAI Sbjct: 2 TAATTRAQE-ITGLPDMKVSVRQVFGIDSDLEVPAFSEADPHVPDVDSDYRFDRATTLAI 60 Query: 63 LAGFAKNRRVMVTGYPGTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKDAIVVKDG 122 LAGFA+NRRVMVTG+ GTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKD+IVV+DG Sbjct: 61 LAGFARNRRVMVTGFHGTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKDSIVVRDG 120 Query: 123 KQVTEFRDGILPWALQHNIALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKPHP 182 KQVTEFRDGILPWALQHN+ALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKPHP Sbjct: 121 KQVTEFRDGILPWALQHNVALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKPHP 180 Query: 183 AFRLFSTANTVGLGDTSGLYHGTQQINQGQMDRWSIVTTLNYLAHDEEVEIVLAKARHYR 242 AFRLFSTANT+GLGDTSGLYHGTQQINQGQMDRWSIVTTLNYL HDEEVEIVLAKARHYR Sbjct: 181 AFRLFSTANTIGLGDTSGLYHGTQQINQGQMDRWSIVTTLNYLPHDEEVEIVLAKARHYR 240 Query: 243 TQEGRDIVNKMVRLADLTRNAFANGDLSTVMSPRTVITWAENSDIFNDIGFAFRVTFLNK 302 EGR+IVNKMVRLADLTRNAFANGDLSTVMSPRTVITW+EN++IF DIGFAFRVTFLNK Sbjct: 241 NAEGREIVNKMVRLADLTRNAFANGDLSTVMSPRTVITWSENAEIFGDIGFAFRVTFLNK 300 Query: 303 CDELERPLVAEFYQRCFNVELPESSVNVALS 333 CDELERPLVAEFYQRCFN ELPESSVNVA+S Sbjct: 301 CDELERPLVAEFYQRCFNAELPESSVNVAMS 331 >ref|YP_530432.1| cobalt chelatase, pCobS small subunit [Rhodopseudomonas palustris BisB18] gb|ABD86113.1| hydrogenobyrinic acid a,c-diamide cobaltochelatase [Rhodopseudomonas palustris BisB18] Length = 331 Score = 635 bits (1638), Expect = e-180, Method: Compositional matrix adjust. Identities = 306/331 (92%), Positives = 315/331 (95%), Gaps = 1/331 (0%) Query: 3 TAVQTKAQEPVVGLPDMKVSVRQVFGIDSDLEVPAYSEVDPHVPETDPDYRFDRATTLAI 62 TA T +QEP GLPDMKVSVRQVFGIDSDLEVPAYSEVD HVP+ D DYRFDRATTLAI Sbjct: 2 TAAMTTSQEPA-GLPDMKVSVRQVFGIDSDLEVPAYSEVDAHVPDVDADYRFDRATTLAI 60 Query: 63 LAGFAKNRRVMVTGYPGTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKDAIVVKDG 122 LAGFAKNRRVMVTG+ GTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKD+IVV+DG Sbjct: 61 LAGFAKNRRVMVTGFHGTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLVGKDSIVVRDG 120 Query: 123 KQVTEFRDGILPWALQHNIALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKPHP 182 KQVTEFRDGILPWALQHNIALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKPHP Sbjct: 121 KQVTEFRDGILPWALQHNIALVFDEYDAGRPDVMFVIQRVLEVSGRLTLLDQNKVIKPHP 180 Query: 183 AFRLFSTANTVGLGDTSGLYHGTQQINQGQMDRWSIVTTLNYLAHDEEVEIVLAKARHYR 242 AFRLFSTANT+GLGDTSGLYHGTQQINQGQMDRWSIVTTLNYL HDEEVEIVLAKA HYR Sbjct: 181 AFRLFSTANTIGLGDTSGLYHGTQQINQGQMDRWSIVTTLNYLPHDEEVEIVLAKAVHYR 240 Query: 243 TQEGRDIVNKMVRLADLTRNAFANGDLSTVMSPRTVITWAENSDIFNDIGFAFRVTFLNK 302 EGRDI NKMVRLADLTRNAFANGDLSTVMSPRTVITWAEN++IF DIGFAFRVTFLNK Sbjct: 241 NPEGRDIANKMVRLADLTRNAFANGDLSTVMSPRTVITWAENAEIFGDIGFAFRVTFLNK 300 Query: 303 CDELERPLVAEFYQRCFNVELPESSVNVALS 333 CDELERPLVAEFYQRCFN ELPESSVNVA+S Sbjct: 301 CDELERPLVAEFYQRCFNAELPESSVNVAMS 331