BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0197.p (328 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_316794.1| ABC transporter, ATPase subunit [Nitrobacter wi... 528 e-148 ref|NP_767362.1| ATP-binding protein [Bradyrhizobium japonicum U... 526 e-147 ref|YP_575537.1| ABC transporter related [Nitrobacter hamburgens... 525 e-147 ref|YP_001236328.1| putative ABC transporter ATP-binding protein... 509 e-142 ref|ZP_01045023.1| ABC transporter, ATPase subunit [Nitrobacter ... 508 e-142 >ref|YP_316794.1| ABC transporter, ATPase subunit [Nitrobacter winogradskyi Nb-255] gb|ABA03442.1| ABC transporter, ATPase subunit [Nitrobacter winogradskyi Nb-255] Length = 332 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 276/335 (82%), Positives = 292/335 (87%), Gaps = 10/335 (2%) Query: 1 MVDFLGMFRRRSAKRNT-GFARSHDDITALGDEFGEMLTSPVRDAPPMARAASAPGVELP 59 MVD +FR+R KR G AR+ DITALGD G+MLT PVRDAPP+AR + + P Sbjct: 1 MVDIFNVFRKRPQKRAARGIARTRTDITALGDAIGDMLTHPVRDAPPVARGSRR---DAP 57 Query: 60 RSQPAAAPAPARARP------ARNSAPAAPQLIKRPGYLAVHSVEKSFGSRQVVRGVSIY 113 S+ A PAP +RP A +S AAP++ RPGYLAVH VEKSFGSRQVVRGVSIY Sbjct: 58 PSRAPARPAPETSRPEAARLRAASSGTAAPRMATRPGYLAVHGVEKSFGSRQVVRGVSIY 117 Query: 114 VRRGEAVGLLGRNGAGKTTVFYMITGLIKADRGAIELDGHDVTKLPMYQRARLGIGYLPQ 173 VRRGEAVGLLG NGAGKTTVFYMITGLI ADRGAIELDGHDVT+LPMYQRARLGIGYLPQ Sbjct: 118 VRRGEAVGLLGPNGAGKTTVFYMITGLIPADRGAIELDGHDVTRLPMYQRARLGIGYLPQ 177 Query: 174 EASIFRGLSVEQNIRAVLEVVEPSKKKREHELDSLLDEFNITRLRKSPSIALSGGERRRV 233 EASIFRGLSVEQNIRAVLEVVEP+KKKRE ELD+LL+EFNITRLRKSPSIALSGGERRRV Sbjct: 178 EASIFRGLSVEQNIRAVLEVVEPNKKKREAELDALLEEFNITRLRKSPSIALSGGERRRV 237 Query: 234 EIARALATRPNYMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETLGLTDR 293 EIARALATRPNYMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETLGLTDR Sbjct: 238 EIARALATRPNYMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETLGLTDR 297 Query: 294 AYIVYAGEILTEGSPEEIVNDPDVRRLYLGEEFRL 328 AYIVYAGEILTEGSPE IVNDPDVRRLYLGEEFRL Sbjct: 298 AYIVYAGEILTEGSPEAIVNDPDVRRLYLGEEFRL 332 >ref|NP_767362.1| ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC45987.1| blr0722 [Bradyrhizobium japonicum USDA 110] Length = 332 Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust. Identities = 281/338 (83%), Positives = 293/338 (86%), Gaps = 16/338 (4%) Query: 1 MVDFLGMFRRRSAKRN-TGFARSHDDITALGDEFGEMLTSPVRDAPPMAR--AASAPG-- 55 MVD MFRRR AKR GFAR DITALGD G ++ SPVRDAPP+AR AP Sbjct: 1 MVDLFSMFRRRPAKRGRPGFARQ--DITALGDSVGGLVASPVRDAPPIARDQPMHAPDHF 58 Query: 56 -----VELPRSQPAAAPAPARARPARNSAPAAPQLIKRPGYLAVHSVEKSFGSRQVVRGV 110 E PR+Q A P A ARP + PQL+KRPG+LAVHSVEK+FGSRQVVRGV Sbjct: 59 QADYQTEPPRAQ-AVHPVRAAARP---NGAGGPQLLKRPGFLAVHSVEKAFGSRQVVRGV 114 Query: 111 SIYVRRGEAVGLLGRNGAGKTTVFYMITGLIKADRGAIELDGHDVTKLPMYQRARLGIGY 170 SIYVRRGEAVGLLG NGAGKTTVFYMITGLIKADRGAIELDGHDVTKLPMYQRARLGIGY Sbjct: 115 SIYVRRGEAVGLLGPNGAGKTTVFYMITGLIKADRGAIELDGHDVTKLPMYQRARLGIGY 174 Query: 171 LPQEASIFRGLSVEQNIRAVLEVVEPSKKKREHELDSLLDEFNITRLRKSPSIALSGGER 230 LPQEASIFRGL+VEQNIRAVLEVVEPS+KKRE +LDSLLDEFNITRLRKSPSIALSGGER Sbjct: 175 LPQEASIFRGLTVEQNIRAVLEVVEPSRKKREQQLDSLLDEFNITRLRKSPSIALSGGER 234 Query: 231 RRVEIARALATRPNYMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETLGL 290 RRVEIARALATRPNYMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETLGL Sbjct: 235 RRVEIARALATRPNYMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETLGL 294 Query: 291 TDRAYIVYAGEILTEGSPEEIVNDPDVRRLYLGEEFRL 328 TDRAYIVYAGEILTEGSP+EIV DPDVRRLYLGEEFRL Sbjct: 295 TDRAYIVYAGEILTEGSPDEIVADPDVRRLYLGEEFRL 332 >ref|YP_575537.1| ABC transporter related [Nitrobacter hamburgensis X14] gb|ABE61077.1| ABC transporter related protein [Nitrobacter hamburgensis X14] Length = 333 Score = 525 bits (1351), Expect = e-147, Method: Compositional matrix adjust. Identities = 274/340 (80%), Positives = 289/340 (85%), Gaps = 19/340 (5%) Query: 1 MVDFLGMFRRRSAKRN-TGFARSHDDITALGDEFGEMLTSPVRDAPPMARAASAPGVELP 59 MVD +FR+R KR FAR+ DITALGD G+MLTSPVRDAPP+AR A Sbjct: 1 MVDIFNVFRKRPQKRGPQAFARTQADITALGDTIGDMLTSPVRDAPPIARGAD------- 53 Query: 60 RSQPAAAPAP-----------ARARPARNSAPAAPQLIKRPGYLAVHSVEKSFGSRQVVR 108 R P AP P A ++ AAP++ KRPGYLAVH VEKSFGSRQVVR Sbjct: 54 RDVPPVAPVPQSRRPARPTPEPPRPRAASNGAAAPRMAKRPGYLAVHGVEKSFGSRQVVR 113 Query: 109 GVSIYVRRGEAVGLLGRNGAGKTTVFYMITGLIKADRGAIELDGHDVTKLPMYQRARLGI 168 GVSIYVRRGEAVGLLG NGAGKTTVFYMITGLI ADRGAIELDGHDVTKLPMYQRARLGI Sbjct: 114 GVSIYVRRGEAVGLLGPNGAGKTTVFYMITGLIPADRGAIELDGHDVTKLPMYQRARLGI 173 Query: 169 GYLPQEASIFRGLSVEQNIRAVLEVVEPSKKKREHELDSLLDEFNITRLRKSPSIALSGG 228 GYLPQEASIFRGLSVEQNIRAVLEVVEPSKKKRE ELD+LL+EFNI+RLRK+PSIALSGG Sbjct: 174 GYLPQEASIFRGLSVEQNIRAVLEVVEPSKKKREAELDALLEEFNISRLRKTPSIALSGG 233 Query: 229 ERRRVEIARALATRPNYMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETL 288 ERRRVEIARALATRP+YMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETL Sbjct: 234 ERRRVEIARALATRPSYMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETL 293 Query: 289 GLTDRAYIVYAGEILTEGSPEEIVNDPDVRRLYLGEEFRL 328 GLTDRAYIVYAGEILTEGSP+EIVNDPDVRRLYLGEEFRL Sbjct: 294 GLTDRAYIVYAGEILTEGSPDEIVNDPDVRRLYLGEEFRL 333 >ref|YP_001236328.1| putative ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ32422.1| putative ABC transporter (ATP-binding protein) [Bradyrhizobium sp. BTAi1] Length = 336 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 269/339 (79%), Positives = 288/339 (84%), Gaps = 14/339 (4%) Query: 1 MVDFLGMFRRRSAKRN-TGFARSHDDITALGDEFGE--------MLTSPVRD-APPMARA 50 MVD +GMFRRR AKR+ G AR DDITA+ D FG L VRD A P Sbjct: 1 MVDLIGMFRRRPAKRSPQGSARRRDDITAMNDPFGNSYGDDPLAALADSVRDEATPRINP 60 Query: 51 ASAPGVE-LPRSQPAAAPAPARARPARNSAPAAPQLIKRPGYLAVHSVEKSFGSRQVVRG 109 S E + R +PA+ P PA+ R ++ PQL++RPG+LAVHS+EKSFGSRQVVRG Sbjct: 61 RSPQNTEQIQRKRPASQPMPAKPR---SNGSGGPQLLRRPGFLAVHSIEKSFGSRQVVRG 117 Query: 110 VSIYVRRGEAVGLLGRNGAGKTTVFYMITGLIKADRGAIELDGHDVTKLPMYQRARLGIG 169 VSIYVRRGEAVGLLG NGAGKTTVFYMITGLIKADRGAIELDGHDVT+LPMYQRARLGIG Sbjct: 118 VSIYVRRGEAVGLLGPNGAGKTTVFYMITGLIKADRGAIELDGHDVTRLPMYQRARLGIG 177 Query: 170 YLPQEASIFRGLSVEQNIRAVLEVVEPSKKKREHELDSLLDEFNITRLRKSPSIALSGGE 229 YLPQEASIFRGL+VEQNIRAVLEVVEPS+KKRE ELD+LL+EF ITRLRKSPSIALSGGE Sbjct: 178 YLPQEASIFRGLTVEQNIRAVLEVVEPSRKKRERELDALLEEFTITRLRKSPSIALSGGE 237 Query: 230 RRRVEIARALATRPNYMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETLG 289 RRRVEIARALATRPNYMLLDEPFAGIDPIAVGDIQ LVRHLTNRGIGVLITDHNVRETLG Sbjct: 238 RRRVEIARALATRPNYMLLDEPFAGIDPIAVGDIQQLVRHLTNRGIGVLITDHNVRETLG 297 Query: 290 LTDRAYIVYAGEILTEGSPEEIVNDPDVRRLYLGEEFRL 328 LTDRAYIVYAG+ILTEGSPEEIV DPDVRRLYLGEEFRL Sbjct: 298 LTDRAYIVYAGQILTEGSPEEIVADPDVRRLYLGEEFRL 336 >ref|ZP_01045023.1| ABC transporter, ATPase subunit [Nitrobacter sp. Nb-311A] gb|EAQ37028.1| ABC transporter, ATPase subunit [Nitrobacter sp. Nb-311A] Length = 333 Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust. Identities = 272/333 (81%), Positives = 286/333 (85%), Gaps = 5/333 (1%) Query: 1 MVDFLGMFRRRSAKR-NTGFARSHDDITALGDEFGEMLTSPVRDAPPMA-RAASAPGVEL 58 MVD +FR+R KR + FAR+ DITALGD G+MLTSPVR+ PP+A R + Sbjct: 1 MVDIFNVFRKRPQKRASQAFARTRTDITALGDTIGDMLTSPVREVPPIAHRTRPSAPPAP 60 Query: 59 PRSQPAAAPAPARARPARNSAP---AAPQLIKRPGYLAVHSVEKSFGSRQVVRGVSIYVR 115 P SQ P P R P A AAP++ RP YLAVH VEKSFGSRQVVRGVSIYVR Sbjct: 61 PVSQSRIPPPPRREAPRPRDASNGTAAPRMAARPSYLAVHGVEKSFGSRQVVRGVSIYVR 120 Query: 116 RGEAVGLLGRNGAGKTTVFYMITGLIKADRGAIELDGHDVTKLPMYQRARLGIGYLPQEA 175 RGEAVGLLG NGAGKTTVFYMITGLI ADRGAIELDGHDVT+LPMYQRARLGIGYLPQEA Sbjct: 121 RGEAVGLLGPNGAGKTTVFYMITGLIPADRGAIELDGHDVTRLPMYQRARLGIGYLPQEA 180 Query: 176 SIFRGLSVEQNIRAVLEVVEPSKKKREHELDSLLDEFNITRLRKSPSIALSGGERRRVEI 235 SIFRGLSVEQNIRAVLEVVEP+KKKRE ELD+LL+EFNITRLRKSPSIALSGGERRRVEI Sbjct: 181 SIFRGLSVEQNIRAVLEVVEPNKKKREAELDALLEEFNITRLRKSPSIALSGGERRRVEI 240 Query: 236 ARALATRPNYMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETLGLTDRAY 295 ARALATRPNYMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETLGLTDRAY Sbjct: 241 ARALATRPNYMLLDEPFAGIDPIAVGDIQDLVRHLTNRGIGVLITDHNVRETLGLTDRAY 300 Query: 296 IVYAGEILTEGSPEEIVNDPDVRRLYLGEEFRL 328 IVYAGEILTEGSPE IVNDPDVRRLYLGEEFRL Sbjct: 301 IVYAGEILTEGSPETIVNDPDVRRLYLGEEFRL 333