BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0180.p (401 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767374.1| hypothetical protein bll0734 [Bradyrhizobium ja... 769 0.0 ref|YP_001202324.1| putative caiB/baiF CoA-transferase family pr... 744 0.0 ref|YP_001236316.1| putative caiB/baiF CoA-transferase family pr... 732 0.0 ref|YP_567328.1| L-carnitine dehydratase/bile acid-inducible pro... 709 0.0 ref|YP_001989099.1| L-carnitine dehydratase/bile acid-inducible ... 705 0.0 >ref|NP_767374.1| hypothetical protein bll0734 [Bradyrhizobium japonicum USDA 110] dbj|BAC45999.1| bll0734 [Bradyrhizobium japonicum USDA 110] Length = 400 Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/399 (92%), Positives = 385/399 (96%) Query: 3 TPAATGAMTGLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDWGPPFHDEDAA 62 T A GAM+GLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDWGPPFHDEDAA Sbjct: 2 TEAVMGAMSGLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDWGPPFHDEDAA 61 Query: 63 YFVGINRNKRSIGLDLASEGGRAVLMKMLETADVLIENFKPGTLDKWGIGNDVLRAKFPR 122 YF+GINRNKRSIGLDLASEGGR VL+KMLETADVLIENFKPGTL+KWGIGN+VLR KFPR Sbjct: 62 YFIGINRNKRSIGLDLASEGGRVVLLKMLETADVLIENFKPGTLEKWGIGNEVLREKFPR 121 Query: 123 LVHCRISGFGADGPRGGNPGYDAIIQAMTGMIAATGSPESGPMRIGVPLVDITTGLYATI 182 LVHCRI GFGADGPRGGNPGYDAIIQAMTGMIAATGSPESGPMRIGVPLVDITTGLYA I Sbjct: 122 LVHCRICGFGADGPRGGNPGYDAIIQAMTGMIAATGSPESGPMRIGVPLVDITTGLYAAI 181 Query: 183 GILMALSERQRSGLGQFIETTLYETGLAIMHPHTANYFMHGKPPSLTGNEHPNLVPYAIF 242 GILMALSERQRSG GQF+ETTLYETGLAIMHPHTANYFMHGKPP LTGNEHPNLVPYAIF Sbjct: 182 GILMALSERQRSGKGQFLETTLYETGLAIMHPHTANYFMHGKPPGLTGNEHPNLVPYAIF 241 Query: 243 PTKTDNIFIGVGNDGTFRKLAKEIGKPELGTDPRFARNKDRIANRDALRAELAAVFSQHE 302 PTKTDNIFIGVGNDGTFRKLA EIGKPELGTDPRFARNKDRIANR+ALRAELAAVFSQHE Sbjct: 242 PTKTDNIFIGVGNDGTFRKLANEIGKPELGTDPRFARNKDRIANREALRAELAAVFSQHE 301 Query: 303 AEPLCNRLLAAGLPAGPVQKIDQALTNPHTIHRGDVIEKDWYKGVASPIRLERTKPNLRR 362 AEPLCNRLLAAGLPAGPVQKIDQALTNPHTI+RGD+IEKDWYKGVASPIRL+R+KP+LRR Sbjct: 302 AEPLCNRLLAAGLPAGPVQKIDQALTNPHTIYRGDIIEKDWYKGVASPIRLDRSKPSLRR 361 Query: 363 TPPKFSQHAAEVLGEFGYSKDEINGLVEKGVVCGPQRKR 401 PPKFSQH+AEVLGEFGYSK EI+ +VEKG VCGP+RKR Sbjct: 362 LPPKFSQHSAEVLGEFGYSKAEIDAMVEKGTVCGPERKR 400 >ref|YP_001202324.1| putative caiB/baiF CoA-transferase family protein Formyl-CoA transferase [Bradyrhizobium sp. ORS 278] emb|CAL74074.1| Putative caiB/baiF CoA-transferase family protein; Putative Formyl-CoA transferase [Bradyrhizobium sp. ORS 278] Length = 400 Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/401 (90%), Positives = 378/401 (94%), Gaps = 1/401 (0%) Query: 1 MNTPAATGAMTGLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDWGPPFHDED 60 M A GAM GLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDWGPPFHDED Sbjct: 1 MTPQFAPGAMAGLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDWGPPFHDED 60 Query: 61 AAYFVGINRNKRSIGLDLASEGGRAVLMKMLETADVLIENFKPGTLDKWGIGNDVLRAKF 120 AAYFVGINRNKRSIGLDLASEGGR VL+KMLETADVLIENFKPGTL+KWGIG+DVLR KF Sbjct: 61 AAYFVGINRNKRSIGLDLASEGGRVVLLKMLETADVLIENFKPGTLEKWGIGSDVLREKF 120 Query: 121 PRLVHCRISGFGADGPRGGNPGYDAIIQAMTGMIAATGSPESGPMRIGVPLVDITTGLYA 180 P+LVHCRI GFGADGPRGGNPGYDAIIQAMTGMIAATGSPESGPMRIGVPLVDITTGLYA Sbjct: 121 PKLVHCRICGFGADGPRGGNPGYDAIIQAMTGMIAATGSPESGPMRIGVPLVDITTGLYA 180 Query: 181 TIGILMALSERQRSGLGQFIETTLYETGLAIMHPHTANYFMHGKPPSLTGNEHPNLVPYA 240 IGILMALSERQRSG GQF+E TLYETGLAIMHPHTANYFMHGKPPSLTGNEHPNLVPYA Sbjct: 181 AIGILMALSERQRSGQGQFLEVTLYETGLAIMHPHTANYFMHGKPPSLTGNEHPNLVPYA 240 Query: 241 IFPTKTDNIFIGVGNDGTFRKLAKEIGKPELGTDPRFARNKDRIANRDALRAELAAVFSQ 300 IFPTKTD+IFIGVGNDGTFRKLA+EIG+PELGTDPRFARNKDR+ANR+ALRAELAAVFSQ Sbjct: 241 IFPTKTDDIFIGVGNDGTFRKLAREIGRPELGTDPRFARNKDRVANREALRAELAAVFSQ 300 Query: 301 HEAEPLCNRLLAAGLPAGPVQKIDQALTNPHTIHRGDVIEKDWYKGVASPIRLERTKPNL 360 EAEPLC+RLLAAGLPAGPVQKIDQALTNPHT HRGDVIEKDWYKGVASPIRLERTKP+L Sbjct: 301 FEAEPLCDRLLAAGLPAGPVQKIDQALTNPHTFHRGDVIEKDWYKGVASPIRLERTKPSL 360 Query: 361 RRTPPKFSQHAAEVLGEFGYSKDEINGLVEKGVVCGPQRKR 401 R TPPKFSQHA +VLGEFGYS +I+ LV +G VC +RKR Sbjct: 361 RSTPPKFSQHARDVLGEFGYSDSDIDALVAQGTVC-TERKR 400 >ref|YP_001236316.1| putative caiB/baiF CoA-transferase family protein [Bradyrhizobium sp. BTAi1] gb|ABQ32410.1| Putative caiB/baiF CoA-transferase family protein [Bradyrhizobium sp. BTAi1] Length = 400 Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/401 (88%), Positives = 376/401 (93%), Gaps = 1/401 (0%) Query: 1 MNTPAATGAMTGLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDWGPPFHDED 60 M A GAM GLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDWGPPFHDED Sbjct: 1 MTPQFAPGAMAGLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDWGPPFHDED 60 Query: 61 AAYFVGINRNKRSIGLDLASEGGRAVLMKMLETADVLIENFKPGTLDKWGIGNDVLRAKF 120 AAYFVGINRNKRSIGLDLAS+GGR VL+KMLETADVLIENFKPGTL+KWGIG+D LR KF Sbjct: 61 AAYFVGINRNKRSIGLDLASDGGRVVLLKMLETADVLIENFKPGTLEKWGIGSDALREKF 120 Query: 121 PRLVHCRISGFGADGPRGGNPGYDAIIQAMTGMIAATGSPESGPMRIGVPLVDITTGLYA 180 P+LVHCRI GFGADGPRGGNPGYDAIIQAMTGMIAATGSPESGPMRIGVPLVDITTGLYA Sbjct: 121 PKLVHCRICGFGADGPRGGNPGYDAIIQAMTGMIAATGSPESGPMRIGVPLVDITTGLYA 180 Query: 181 TIGILMALSERQRSGLGQFIETTLYETGLAIMHPHTANYFMHGKPPSLTGNEHPNLVPYA 240 IGILMALSERQRSG+GQF+E TLYETGLAIMHPHTANYFMHGKPPSLTGNEHPNLVPYA Sbjct: 181 AIGILMALSERQRSGIGQFLEVTLYETGLAIMHPHTANYFMHGKPPSLTGNEHPNLVPYA 240 Query: 241 IFPTKTDNIFIGVGNDGTFRKLAKEIGKPELGTDPRFARNKDRIANRDALRAELAAVFSQ 300 IFPTKTD+IFIGVGNDGTFRKLA+EIG+P+LGTDPRFARN+DR+ANR+ALRAELAAVFSQ Sbjct: 241 IFPTKTDDIFIGVGNDGTFRKLAREIGRPDLGTDPRFARNRDRVANREALRAELAAVFSQ 300 Query: 301 HEAEPLCNRLLAAGLPAGPVQKIDQALTNPHTIHRGDVIEKDWYKGVASPIRLERTKPNL 360 EAEPLC+RLLAAGLPAGPVQKIDQALT+PHT++RGDVIEKDWYKGVASPIRLERTK +L Sbjct: 301 FEAEPLCDRLLAAGLPAGPVQKIDQALTHPHTLYRGDVIEKDWYKGVASPIRLERTKASL 360 Query: 361 RRTPPKFSQHAAEVLGEFGYSKDEINGLVEKGVVCGPQRKR 401 R TPP FSQHA EVL EFGY+ DEI L+ +G VC +RKR Sbjct: 361 RTTPPAFSQHAQEVLAEFGYTPDEIEALLAEGTVCA-ERKR 400 >ref|YP_567328.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodopseudomonas palustris BisB5] gb|ABE37427.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodopseudomonas palustris BisB5] Length = 401 Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/401 (85%), Positives = 363/401 (90%) Query: 1 MNTPAATGAMTGLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDWGPPFHDED 60 M GAM GLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDWGPPFHD+D Sbjct: 1 MTAALMPGAMAGLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDWGPPFHDDD 60 Query: 61 AAYFVGINRNKRSIGLDLASEGGRAVLMKMLETADVLIENFKPGTLDKWGIGNDVLRAKF 120 AAYF+GINRNKRSIGLDLAS GGR VL++ML+ ADVLIENFKPGTLDKWG+GND++R KF Sbjct: 61 AAYFIGINRNKRSIGLDLASPGGRDVLLEMLKDADVLIENFKPGTLDKWGLGNDIVREKF 120 Query: 121 PRLVHCRISGFGADGPRGGNPGYDAIIQAMTGMIAATGSPESGPMRIGVPLVDITTGLYA 180 PRLVHCRISGFGADGPRGGNPGYDAIIQAMTGMIAATGSPESGPMRIGVPLVDITTGLYA Sbjct: 121 PRLVHCRISGFGADGPRGGNPGYDAIIQAMTGMIAATGSPESGPMRIGVPLVDITTGLYA 180 Query: 181 TIGILMALSERQRSGLGQFIETTLYETGLAIMHPHTANYFMHGKPPSLTGNEHPNLVPYA 240 IGILMALSERQRSG GQF+ETTLYETGLAIMHPHTANYF+HGKPP+LTGNEHPNLVPYA Sbjct: 181 AIGILMALSERQRSGKGQFLETTLYETGLAIMHPHTANYFLHGKPPALTGNEHPNLVPYA 240 Query: 241 IFPTKTDNIFIGVGNDGTFRKLAKEIGKPELGTDPRFARNKDRIANRDALRAELAAVFSQ 300 IF + IF GVGNDGTFRKL KEIGKPELGTDPRFARNKDRIANR ALR EL AVF Q Sbjct: 241 IFEARDGKIFTGVGNDGTFRKLCKEIGKPELGTDPRFARNKDRIANRAALRTELEAVFRQ 300 Query: 301 HEAEPLCNRLLAAGLPAGPVQKIDQALTNPHTIHRGDVIEKDWYKGVASPIRLERTKPNL 360 H+A PLC+RLL AGLPAGPVQ ID+ALT+PHT HRGDVIE+DWYKGVASPIR ERTK +L Sbjct: 301 HDAAPLCDRLLDAGLPAGPVQSIDKALTSPHTTHRGDVIEQDWYKGVASPIRFERTKASL 360 Query: 361 RRTPPKFSQHAAEVLGEFGYSKDEINGLVEKGVVCGPQRKR 401 R PPKFSQHA EVLGEFGYS DEI+ LV GVV GP+RKR Sbjct: 361 RGLPPKFSQHAGEVLGEFGYSPDEISKLVADGVVSGPERKR 401 >ref|YP_001989099.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodopseudomonas palustris TIE-1] gb|ACE98623.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodopseudomonas palustris TIE-1] Length = 401 Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/401 (84%), Positives = 367/401 (91%) Query: 1 MNTPAATGAMTGLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDWGPPFHDED 60 M + + GA+ GLRVIDLTRVLGGPYCTQILADHGA+VIKVEPPAGDEVRDWGPPFHDED Sbjct: 1 MTSASMPGAIAGLRVIDLTRVLGGPYCTQILADHGANVIKVEPPAGDEVRDWGPPFHDED 60 Query: 61 AAYFVGINRNKRSIGLDLASEGGRAVLMKMLETADVLIENFKPGTLDKWGIGNDVLRAKF 120 AAYF+G+NRNKRSIGLDLAS GGR VL+KMLE ADVLIENFKPGTLDKWG+ N+V+R KF Sbjct: 61 AAYFLGVNRNKRSIGLDLASPGGREVLLKMLEDADVLIENFKPGTLDKWGLSNEVIREKF 120 Query: 121 PRLVHCRISGFGADGPRGGNPGYDAIIQAMTGMIAATGSPESGPMRIGVPLVDITTGLYA 180 PRLVHCRISGFGADGPRGGNPGYDAIIQAMTGMIAATGSPE+GP+RIGVPLVDITTGLYA Sbjct: 121 PRLVHCRISGFGADGPRGGNPGYDAIIQAMTGMIAATGSPETGPVRIGVPLVDITTGLYA 180 Query: 181 TIGILMALSERQRSGLGQFIETTLYETGLAIMHPHTANYFMHGKPPSLTGNEHPNLVPYA 240 TIGILMAL+ER+RSG GQF+ETTLYETGLAIMHPHTANYF+HGKPP+LTGNEHPNLVPY+ Sbjct: 181 TIGILMALAERERSGKGQFVETTLYETGLAIMHPHTANYFLHGKPPALTGNEHPNLVPYS 240 Query: 241 IFPTKTDNIFIGVGNDGTFRKLAKEIGKPELGTDPRFARNKDRIANRDALRAELAAVFSQ 300 F + IF GVGNDGTFRKL KEIGKPELGTDPRFARNKDRIANR ALRAEL AVFSQ Sbjct: 241 TFNARDGQIFTGVGNDGTFRKLCKEIGKPELGTDPRFARNKDRIANRAALRAELEAVFSQ 300 Query: 301 HEAEPLCNRLLAAGLPAGPVQKIDQALTNPHTIHRGDVIEKDWYKGVASPIRLERTKPNL 360 H+A PLC+RLL AGLPAGPVQ ID+ALT+PHT +RGDVIEKDWYKGVASPIR ERTK +L Sbjct: 301 HDAVPLCDRLLNAGLPAGPVQTIDKALTSPHTAYRGDVIEKDWYKGVASPIRFERTKASL 360 Query: 361 RRTPPKFSQHAAEVLGEFGYSKDEINGLVEKGVVCGPQRKR 401 R PPKFSQHA+EVLGEFGYS D+I+ LV G+V GP+RKR Sbjct: 361 RGLPPKFSQHASEVLGEFGYSADDISKLVADGIVSGPERKR 401