BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0178.p (178 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767376.1| transcriptional regulator [Bradyrhizobium japon... 274 4e-72 ref|YP_001236314.1| organic hydroperoxide resistance transcripti... 212 2e-53 ref|YP_001202322.1| organic hydroperoxide resistance transcripti... 210 5e-53 ref|YP_001354616.1| MarR family transcriptional regulator [Janth... 180 9e-44 ref|YP_521855.1| MarR family transcriptional regulator [Rhodofer... 177 8e-43 >ref|NP_767376.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC46001.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 197 Score = 274 bits (701), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 133/153 (86%), Positives = 144/153 (94%) Query: 7 MARKPTAADQALRLDNQICFAVYSTAHAFNRVYKPLLDRLGLTYPQYLVMLALWERDDVA 66 MARKP+AAD LRLDNQICFAVYS AHAFNRVYKPLLDRLGLTYPQYLVML LWERDDV Sbjct: 45 MARKPSAADAPLRLDNQICFAVYSAAHAFNRVYKPLLDRLGLTYPQYLVMLVLWERDDVP 104 Query: 67 VKDLGERLFLDSGTLTPLLKRLEAAELIRRTRSTADERVVLIALTPQGHALREKARAVPQ 126 VKD+GERLFLDSGTLTPLLKRLEAA L++RTRS+ DER VLIALTPQGHAL++KARAVPQ Sbjct: 105 VKDIGERLFLDSGTLTPLLKRLEAAHLVKRTRSSEDERQVLIALTPQGHALKDKARAVPQ 164 Query: 127 SILAASDCTVGELMAMKDEIVALRDRLNAVLGQ 159 SILAASDC+V EL+AMKDEIVALRDRLNAV+G+ Sbjct: 165 SILAASDCSVSELVAMKDEIVALRDRLNAVIGE 197 >ref|YP_001236314.1| organic hydroperoxide resistance transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ32408.1| transcriptional regulator, MarR family [Bradyrhizobium sp. BTAi1] Length = 152 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 104/151 (68%), Positives = 128/151 (84%), Gaps = 1/151 (0%) Query: 9 RKPTAADQALRLDNQICFAVYSTAHAFNRVYKPLLDRLGLTYPQYLVMLALWERDDVAVK 68 RK +AAD L+L NQ+CFAVYSTAHAFNRVYKPLLDRLGLTYPQYLVML LWERD ++VK Sbjct: 2 RKKSAADVPLQLGNQLCFAVYSTAHAFNRVYKPLLDRLGLTYPQYLVMLVLWERDGLSVK 61 Query: 69 DLGERLFLDSGTLTPLLKRLEAAELIRRTRSTADERVVLIALTPQGHALREKARA-VPQS 127 ++GERL+LDSGTLTPLLKR+EAA L++RTRS ADER VL+ALT QG ALR+KA+A +P + Sbjct: 62 EIGERLYLDSGTLTPLLKRMEAAHLLKRTRSAADERQVLVALTAQGAALRDKAKAIIPPA 121 Query: 128 ILAASDCTVGELMAMKDEIVALRDRLNAVLG 158 IL A+ C++ EL + ++V LR++LNA G Sbjct: 122 ILDATGCSLAELADLHGKLVRLREQLNAAAG 152 >ref|YP_001202322.1| organic hydroperoxide resistance transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL74072.1| Organic hydroperoxide resistance transcriptional regulator, MarR family [Bradyrhizobium sp. ORS 278] Length = 151 Score = 210 bits (535), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 105/150 (70%), Positives = 126/150 (84%), Gaps = 1/150 (0%) Query: 9 RKPTAADQALRLDNQICFAVYSTAHAFNRVYKPLLDRLGLTYPQYLVMLALWERDDVAVK 68 RK +AAD L+L NQ+CFAVYSTAHAFNRVYKPLLD LGLTYPQYLVML LWERD ++VK Sbjct: 2 RKKSAADLPLQLGNQLCFAVYSTAHAFNRVYKPLLDCLGLTYPQYLVMLVLWERDGLSVK 61 Query: 69 DLGERLFLDSGTLTPLLKRLEAAELIRRTRSTADERVVLIALTPQGHALREKARA-VPQS 127 ++GERLFLDSGTLTPLLKR+EAA L++RTRS DER VL+ALT QG ALREKARA VP + Sbjct: 62 EIGERLFLDSGTLTPLLKRMEAAHLVKRTRSAEDERQVLVALTGQGAALREKARAIVPPA 121 Query: 128 ILAASDCTVGELMAMKDEIVALRDRLNAVL 157 IL A+ C++ EL + ++V LR+RL+A + Sbjct: 122 ILDATGCSIAELADLHGKLVKLRERLDAAV 151 >ref|YP_001354616.1| MarR family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR90503.1| transcriptional regulator, MarR family [Janthinobacterium sp. Marseille] Length = 163 Score = 180 bits (456), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 87/149 (58%), Positives = 112/149 (75%) Query: 7 MARKPTAADQALRLDNQICFAVYSTAHAFNRVYKPLLDRLGLTYPQYLVMLALWERDDVA 66 M K T D A RLDNQ+CFA+YST+ A ++VY+ LL RLGLTY QYLVM+ LWE+D++ Sbjct: 13 MKSKSTKPDNAPRLDNQLCFALYSTSLAMSKVYRKLLPRLGLTYSQYLVMMVLWEQDELT 72 Query: 67 VKDLGERLFLDSGTLTPLLKRLEAAELIRRTRSTADERVVLIALTPQGHALREKARAVPQ 126 V D+GERLFLDS TLTPLLKR+EAAELI R R+ DER V+I LT G ALR KA + Sbjct: 73 VSDIGERLFLDSATLTPLLKRMEAAELITRVRAANDERQVIITLTKSGDALRSKALEMQG 132 Query: 127 SILAASDCTVGELMAMKDEIVALRDRLNA 155 +L A+ C++ E++AMK+++V LR +L A Sbjct: 133 EVLCATACSLDEVVAMKEQLVTLRSKLAA 161 >ref|YP_521855.1| MarR family transcriptional regulator [Rhodoferax ferrireducens T118] gb|ABD68324.1| transcriptional regulator, MarR family [Rhodoferax ferrireducens T118] Length = 151 Score = 177 bits (448), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 87/141 (61%), Positives = 108/141 (76%) Query: 15 DQALRLDNQICFAVYSTAHAFNRVYKPLLDRLGLTYPQYLVMLALWERDDVAVKDLGERL 74 D L LDNQ+CFA+YST+ A ++Y+PLL LGLTYPQYLVML LWE+DDV+V LGERL Sbjct: 11 DPELLLDNQLCFALYSTSLAMTKIYQPLLAALGLTYPQYLVMLVLWEQDDVSVSALGERL 70 Query: 75 FLDSGTLTPLLKRLEAAELIRRTRSTADERVVLIALTPQGHALREKARAVPQSILAASDC 134 FLDSGTLTPLLKR+EAA +RRTRS+ DER V IALT G L+ +A VP +++A+ C Sbjct: 71 FLDSGTLTPLLKRMEAAGFLRRTRSSLDERRVQIALTDSGRELKAQAAKVPACVVSAAHC 130 Query: 135 TVGELMAMKDEIVALRDRLNA 155 V ELMA+ ++ ALR +L A Sbjct: 131 PVAELMALTKKVQALRRQLTA 151