BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0173.p         (148 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004354321.1| autotransporter beta-domain [Pseudomonas bra...   101   4e-20
gb|EGH94372.1| autotransporter, putative [Pseudomonas syringae p...   100   6e-20
ref|NP_792568.1| autotransporter [Pseudomonas syringae pv. tomat...   100   7e-20
gb|EGH79436.1| Outer membrane autotransporter barrel [Pseudomona...   100   1e-19
gb|EGH09218.1| autotransporter [Pseudomonas syringae pv. morspru...   100   1e-19

>ref|YP_004354321.1| autotransporter beta-domain [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gb|AEA69317.1| Conserved hypothetical protein, containing autotransporter
           beta-domain [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 807

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/98 (53%), Positives = 60/98 (61%)

Query: 11  GAAPVQLYREEVSVYSALPQVAQKLGLATLGTFHQRQGDQALLTGGGEQPAAWARAYGSH 70
           GAAP+ LYR EV  +S LP  A +L L  LGTFH RQGDQ LLT  G   A W R YG  
Sbjct: 485 GAAPIPLYRPEVPTWSVLPPAAAQLTLMALGTFHDRQGDQHLLTENGAFGAGWGRVYGKD 544

Query: 71  SSQSWAGTVSPAFDGTMAGVQVGVDTIFCSRSPAITRR 108
             Q+WAGTV+P FDG++ G QVG D      S   T+R
Sbjct: 545 LEQTWAGTVTPRFDGSIKGFQVGNDLYSSPLSSGQTQR 582


>gb|EGH94372.1| autotransporter, putative [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 923

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 58/85 (68%)

Query: 11  GAAPVQLYREEVSVYSALPQVAQKLGLATLGTFHQRQGDQALLTGGGEQPAAWARAYGSH 70
           GAAPV LYR EV+ Y+ +P  A  L L +LGTFH+RQGDQ+LL   G  PA WAR +GS 
Sbjct: 601 GAAPVPLYRPEVANYAIVPPAAATLALTSLGTFHERQGDQSLLAQSGAAPAGWARVFGSD 660

Query: 71  SSQSWAGTVSPAFDGTMAGVQVGVD 95
             Q W+GTVSP  D ++ G Q+G D
Sbjct: 661 FKQQWSGTVSPGLDASLKGYQIGHD 685


>ref|NP_792568.1| autotransporter [Pseudomonas syringae pv. tomato str. DC3000]
 gb|AAO56263.1| autotransporter, putative [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 927

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 58/85 (68%)

Query: 11  GAAPVQLYREEVSVYSALPQVAQKLGLATLGTFHQRQGDQALLTGGGEQPAAWARAYGSH 70
           GAAPV LYR EV+ Y+ +P  A  L L +LGTFH+RQGDQ+LL   G  PA WAR +GS 
Sbjct: 605 GAAPVPLYRPEVANYAIVPPAAATLALTSLGTFHERQGDQSLLAQSGAAPAGWARVFGSD 664

Query: 71  SSQSWAGTVSPAFDGTMAGVQVGVD 95
             Q W+GTVSP  D ++ G Q+G D
Sbjct: 665 FKQQWSGTVSPGLDASLKGYQIGHD 689


>gb|EGH79436.1| Outer membrane autotransporter barrel [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 845

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 61/98 (62%)

Query: 11  GAAPVQLYREEVSVYSALPQVAQKLGLATLGTFHQRQGDQALLTGGGEQPAAWARAYGSH 70
           GAAP+ LYR EV+ YS +   A  L L++LGTFH+RQGDQALLT  G  PA WAR +GS 
Sbjct: 523 GAAPIALYRPEVANYSGVAPTAAVLALSSLGTFHERQGDQALLTQNGTTPAGWARVFGSD 582

Query: 71  SSQSWAGTVSPAFDGTMAGVQVGVDTIFCSRSPAITRR 108
             Q W+G VSP  D +  G Q+G D     +    T+R
Sbjct: 583 FRQRWSGDVSPGLDASFKGYQIGHDLYVWQQDSGQTQR 620


>gb|EGH09218.1| autotransporter [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 875

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/85 (52%), Positives = 57/85 (67%)

Query: 11  GAAPVQLYREEVSVYSALPQVAQKLGLATLGTFHQRQGDQALLTGGGEQPAAWARAYGSH 70
           GAAP+ LYR EV+ Y+ +P     L L +LGTFH+RQGDQ+LL   G  PA WAR +GS 
Sbjct: 553 GAAPIPLYRPEVANYAVIPPAVATLALTSLGTFHERQGDQSLLAQSGAAPAGWARVFGSD 612

Query: 71  SSQSWAGTVSPAFDGTMAGVQVGVD 95
             Q W+GTVSP  D ++ G Q+G D
Sbjct: 613 FKQQWSGTVSPGLDASLKGYQIGHD 637