BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0158.p (139 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001243313.1| hypothetical protein BBta_7560 [Bradyrhizobi... 197 4e-49 ref|YP_001202797.1| hypothetical protein BRADO0623 [Bradyrhizobi... 188 3e-46 ref|YP_486268.1| hypothetical protein RPB_2655 [Rhodopseudomonas... 164 3e-39 ref|YP_569819.1| hypothetical protein RPD_2689 [Rhodopseudomonas... 152 2e-35 ref|NP_948089.1| hypothetical protein RPA2746 [Rhodopseudomonas ... 149 1e-34 >ref|YP_001243313.1| hypothetical protein BBta_7560 [Bradyrhizobium sp. BTAi1] gb|ABQ39407.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 141 Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 100/140 (71%), Positives = 115/140 (82%), Gaps = 2/140 (1%) Query: 1 MRSRVRKFAHILERFGLALAGAASGLFVAIHVGSSVSALTSQAFLLIMMLGGAIGFYLGI 60 MR RVR+FAH+LER GLALAGAA GLFV HVGSSV ALT+Q FLL+MM+ GA GFYLGI Sbjct: 1 MRLRVRQFAHVLERSGLALAGAACGLFVGAHVGSSVPALTTQGFLLLMMVSGAFGFYLGI 60 Query: 61 DTPPKLFHPKD--TASTRKIDAAELLSAVGTFLATMVAFFSVGVVVLRSEPDIGWTAAIM 118 DTP FHP + T + RKIDAAE LSAVGTFLAT+ AFF+VG+++LR +P I WT+ IM Sbjct: 61 DTPQIPFHPHEEGTPAERKIDAAEFLSAVGTFLATLTAFFAVGIIILREDPHIVWTSLIM 120 Query: 119 AGWVLGVAMQIVAGTIARTR 138 AGWV+GV MQIVAGTIAR R Sbjct: 121 AGWVIGVVMQIVAGTIARLR 140 >ref|YP_001202797.1| hypothetical protein BRADO0623 [Bradyrhizobium sp. ORS 278] emb|CAL74557.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 141 Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 96/140 (68%), Positives = 111/140 (79%), Gaps = 2/140 (1%) Query: 1 MRSRVRKFAHILERFGLALAGAASGLFVAIHVGSSVSALTSQAFLLIMMLGGAIGFYLGI 60 MR RVR+ AH+LER GLALAGAA G+FV HVGSSV LT+Q FLL+MML GA GFYLGI Sbjct: 1 MRIRVRQSAHVLERSGLALAGAACGVFVGAHVGSSVPWLTTQGFLLVMMLSGAFGFYLGI 60 Query: 61 DTPPKLFHPKD--TASTRKIDAAELLSAVGTFLATMVAFFSVGVVVLRSEPDIGWTAAIM 118 DTP FHP + T + KIDAAE LSAVGTF AT+ AFF+VG+++LR +P I WT+ IM Sbjct: 61 DTPQIPFHPHEEGTPAENKIDAAEFLSAVGTFFATLTAFFAVGIIILREDPHIVWTSLIM 120 Query: 119 AGWVLGVAMQIVAGTIARTR 138 AGWV+GVAMQIVAG IAR R Sbjct: 121 AGWVIGVAMQIVAGAIARMR 140 >ref|YP_486268.1| hypothetical protein RPB_2655 [Rhodopseudomonas palustris HaA2] gb|ABD07357.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 143 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 87/142 (61%), Positives = 104/142 (73%), Gaps = 4/142 (2%) Query: 1 MRSRVRKFAHILERFGLALAGAASGLFVAIHVGSSVSALTSQAFLLIMMLGGAIGFYLGI 60 MR RVRK AHILER GLA+AGAA G+FV HVG+S+ ALT+ AFLL M+ GA+GFYLGI Sbjct: 1 MRLRVRKAAHILERTGLAMAGAACGMFVGAHVGTSIGALTTVAFLLAMIAVGAVGFYLGI 60 Query: 61 DTPPKLFHPKDTASTR----KIDAAELLSAVGTFLATMVAFFSVGVVVLRSEPDIGWTAA 116 D PP FH ++ + +ID AE LSAVGTF AT+ AF SV +VVL P + WTA Sbjct: 61 DIPPLPFHAGESEAEHTERGRIDTAEFLSAVGTFCATLAAFASVSLVVLHQAPHLAWTAM 120 Query: 117 IMAGWVLGVAMQIVAGTIARTR 138 I+ GW+ GV MQIVAGTIAR+R Sbjct: 121 ILTGWLGGVTMQIVAGTIARSR 142 >ref|YP_569819.1| hypothetical protein RPD_2689 [Rhodopseudomonas palustris BisB5] gb|ABE39918.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 143 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 87/142 (61%), Positives = 98/142 (69%), Gaps = 4/142 (2%) Query: 1 MRSRVRKFAHILERFGLALAGAASGLFVAIHVGSSVSALTSQAFLLIMMLGGAIGFYLGI 60 MR RVRK AH LER GLALAGAA G FV HVG+SV ALT+ AFLL M+ GAIGFYLGI Sbjct: 1 MRLRVRKAAHFLERTGLALAGAACGTFVGAHVGTSVGALTTVAFLLAMIAVGAIGFYLGI 60 Query: 61 DTPPKLFHPKDT----ASTRKIDAAELLSAVGTFLATMVAFFSVGVVVLRSEPDIGWTAA 116 D PP F ++ A K+DAAE LSAVGTF AT+ AF SV +VVL + WT Sbjct: 61 DIPPLPFQAGESEAEHAERGKVDAAEFLSAVGTFFATLAAFASVSLVVLHLSSHVFWTGL 120 Query: 117 IMAGWVLGVAMQIVAGTIARTR 138 I+ GW+ GV MQIVAG IAR R Sbjct: 121 IIIGWLGGVTMQIVAGAIARMR 142 >ref|NP_948089.1| hypothetical protein RPA2746 [Rhodopseudomonas palustris CGA009] ref|YP_001992066.1| hypothetical protein Rpal_3085 [Rhodopseudomonas palustris TIE-1] emb|CAE28188.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] gb|ACF01591.1| putative membrane protein of unknown function [Rhodopseudomonas palustris TIE-1] Length = 145 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 86/140 (61%), Positives = 98/140 (70%), Gaps = 2/140 (1%) Query: 1 MRSRVRKFAHILERFGLALAGAASGLFVAIHVGSSVSALTSQAFLLIMMLGGAIGFYLGI 60 MR RVRK AH LER GLALAGAA G FV HVG+S +ALT+ FLL M+ GAIGFYLGI Sbjct: 1 MRLRVRKAAHFLERTGLALAGAACGTFVGAHVGTSFAALTTIGFLLGMIALGAIGFYLGI 60 Query: 61 DTPPKLFH--PKDTASTRKIDAAELLSAVGTFLATMVAFFSVGVVVLRSEPDIGWTAAIM 118 D PP F +D+ ++ KIDAAE LSA GTFLAT+ AF SV VVLR W+ I+ Sbjct: 61 DIPPLPFQGADEDSNASGKIDAAEFLSAFGTFLATLAAFASVSAVVLRLNLHSVWSWLIL 120 Query: 119 AGWVLGVAMQIVAGTIARTR 138 GW+ GV MQI AGTIAR R Sbjct: 121 IGWLAGVTMQITAGTIARLR 140