BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0145.p (283 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001243302.1| hypothetical protein BBta_7547 [Bradyrhizobi... 386 e-105 ref|NP_766801.1| hypothetical protein bll0161 [Bradyrhizobium ja... 386 e-105 ref|YP_001202809.1| hypothetical protein BRADO0637 [Bradyrhizobi... 380 e-103 ref|YP_567423.1| hypothetical protein RPD_0282 [Rhodopseudomonas... 359 3e-97 ref|YP_484169.1| hypothetical protein RPB_0547 [Rhodopseudomonas... 356 2e-96 >ref|YP_001243302.1| hypothetical protein BBta_7547 [Bradyrhizobium sp. BTAi1] gb|ABQ39396.1| hypothetical protein BBta_7547 [Bradyrhizobium sp. BTAi1] Length = 258 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 183/259 (70%), Positives = 212/259 (81%), Gaps = 1/259 (0%) Query: 25 FCAERASAQGRLDAQYEATLAGIPVGKGSWTIEIGDDTFSASAQGGTAGLLKAFSGGSGA 84 A+ A AQ RLDAQYEA+LAGIPVGKG+W +EIGDD + ASAQGGTAGLLK+FS G+G Sbjct: 1 MLAQNAQAQARLDAQYEASLAGIPVGKGTWAVEIGDDQYGASAQGGTAGLLKSFSQGAGT 60 Query: 85 GASQGRVVNGALAASSYTATTTTSKKSETIRMVLANGGIKESAIEPEPPVDADRLPVTDA 144 GA QGRVVNGAL SY A+TTT KKSE I + L NG +K+ AIEP PPVD DR+PVTDA Sbjct: 61 GAVQGRVVNGALVGQSYQASTTTGKKSEQIHINLQNGNVKDFAIEPTPPVDPDRIPVTDA 120 Query: 145 QKKNVFDPMTGSFLRAPGNAELMSPDICRSGAGIFDGRMRYDLKLDFKRVEIVKAERGYH 204 K+ V DPMT S +R PGN EL++PD CR A +FDGRMRY+LKLD+KR+E VKA++GY Sbjct: 121 HKRGVLDPMTASLVRVPGNGELLAPDSCRGAAPVFDGRMRYELKLDYKRMENVKADKGYR 180 Query: 205 GPALVCALYFVPISGYIPDRPVIKYLAAQRNIEIAFVPIAGTRLLVPFRMTIPTPLGQAM 264 GPALVCA+YF P++GYIPDRPVIKYLA RN+EI FVPIAGTR+LVPF+M IPTPLG AM Sbjct: 181 GPALVCAIYFTPVAGYIPDRPVIKYLAQARNMEIFFVPIAGTRVLVPFKMVIPTPLGTAM 240 Query: 265 LEATSFVTTAAPPRVAKTQ 283 LEATSF+T A P VAKTQ Sbjct: 241 LEATSFITQAT-PHVAKTQ 258 >ref|NP_766801.1| hypothetical protein bll0161 [Bradyrhizobium japonicum USDA 110] dbj|BAC45426.1| bll0161 [Bradyrhizobium japonicum USDA 110] Length = 292 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 182/270 (67%), Positives = 222/270 (82%), Gaps = 1/270 (0%) Query: 14 LLGLCAGALLLFCAERASAQGRLDAQYEATLAGIPVGKGSWTIEIGDDTFSASAQGGTAG 73 + LC G + + A+ A+AQG+L+AQYEATLAGIPVG+G+W I+I DD F+A+A GGT G Sbjct: 24 MAALC-GLVFAWEAKPAAAQGKLEAQYEATLAGIPVGRGAWNIDIQDDVFAAAASGGTTG 82 Query: 74 LLKAFSGGSGAGASQGRVVNGALAASSYTATTTTSKKSETIRMVLANGGIKESAIEPEPP 133 LLK+F+GGSG GASQGRVVNGAL A+ Y A+TTTSKK+E I + L G +KE I PEPP Sbjct: 83 LLKSFAGGSGTGASQGRVVNGALVATGYQASTTTSKKTEEIHITLDKGNVKEFGIVPEPP 142 Query: 134 VDADRLPVTDAQKKNVFDPMTGSFLRAPGNAELMSPDICRSGAGIFDGRMRYDLKLDFKR 193 VD DR+ VT+A ++ V+DPMT S LR PG + ++PD C + A +FDGRMRYDLKLDFKR Sbjct: 143 VDPDRIVVTEAHRRGVWDPMTASLLRVPGTGDPVTPDACHNAAPVFDGRMRYDLKLDFKR 202 Query: 194 VEIVKAERGYHGPALVCALYFVPISGYIPDRPVIKYLAAQRNIEIAFVPIAGTRLLVPFR 253 +E VKAE+GY GP +VCALYFVP++GYIPDRPVIKYLAAQRNIEIAF P+AGTR+LVPF Sbjct: 203 METVKAEKGYRGPVVVCALYFVPVAGYIPDRPVIKYLAAQRNIEIAFAPVAGTRILVPFW 262 Query: 254 MTIPTPLGQAMLEATSFVTTAAPPRVAKTQ 283 + +PTPLG AMLEATSF+T+A PPRVAKTQ Sbjct: 263 LKVPTPLGPAMLEATSFITSAQPPRVAKTQ 292 >ref|YP_001202809.1| hypothetical protein BRADO0637 [Bradyrhizobium sp. ORS 278] emb|CAL74569.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 258 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 182/257 (70%), Positives = 211/257 (82%), Gaps = 1/257 (0%) Query: 27 AERASAQGRLDAQYEATLAGIPVGKGSWTIEIGDDTFSASAQGGTAGLLKAFSGGSGAGA 86 A A AQ RLDAQYEA+LAGIPVGKG+W IEIGDD + ASAQGGTAGLLK+FS GSG G+ Sbjct: 3 APSAQAQARLDAQYEASLAGIPVGKGTWAIEIGDDQYGASAQGGTAGLLKSFSQGSGNGS 62 Query: 87 SQGRVVNGALAASSYTATTTTSKKSETIRMVLANGGIKESAIEPEPPVDADRLPVTDAQK 146 QGRVVNGAL A SY A++TT KKSE IR+ L NG +K+ IEP PPVD DR+PVTDA K Sbjct: 63 VQGRVVNGALVAQSYQASSTTGKKSEQIRINLQNGTVKDFTIEPTPPVDPDRVPVTDAHK 122 Query: 147 KNVFDPMTGSFLRAPGNAELMSPDICRSGAGIFDGRMRYDLKLDFKRVEIVKAERGYHGP 206 + VFDPMT S LR PGN EL+SP+ CR A +FDGRMRY+LKLD+KR+E VKA++GY GP Sbjct: 123 RGVFDPMTASLLRVPGNGELLSPESCRGAAPVFDGRMRYELKLDYKRMENVKADKGYRGP 182 Query: 207 ALVCALYFVPISGYIPDRPVIKYLAAQRNIEIAFVPIAGTRLLVPFRMTIPTPLGQAMLE 266 ALVCA+YF P++GYIPDRPVIKYLA RN+E+ FVP+AGTR+LVPFR+ IPT G AMLE Sbjct: 183 ALVCAIYFTPVAGYIPDRPVIKYLAQARNMEVFFVPLAGTRILVPFRVVIPTSFGTAMLE 242 Query: 267 ATSFVTTAAPPRVAKTQ 283 ATSF+T A P VAKTQ Sbjct: 243 ATSFITQAT-PHVAKTQ 258 >ref|YP_567423.1| hypothetical protein RPD_0282 [Rhodopseudomonas palustris BisB5] gb|ABE37522.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 293 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 170/274 (62%), Positives = 215/274 (78%), Gaps = 6/274 (2%) Query: 16 GLCAGALLLFCA-----ERASAQGRLDAQYEATLAGIPVGKGSWTIEIGDDTFSASAQGG 70 GL AG L + A +RA+AQG+LDA+YEATLAGI VGKG W IEI DD ++A+A G Sbjct: 20 GLIAGLLTIGLASIAPLDRAAAQGKLDARYEATLAGIEVGKGGWVIEITDDGYAAAANGA 79 Query: 71 TAGLLKAFSGGSGAGASQGRVVNGALAASSYTATTTTSKKSETIRMVLANGGIKESAIEP 130 T+G+L+AFS G+G+G +QGR+VNG + +Y ATTT++KK+ETIR+ LANG +KES+IEP Sbjct: 80 TSGVLQAFSRGNGSGEAQGRLVNGQFSPMNYMATTTSAKKTETIRITLANGNVKESSIEP 139 Query: 131 EPPVDADRLPVTDAQKKNVFDPMTGSFLRAPGNAELMSPDICRSGAGIFDGRMRYDLKLD 190 E P DADR+PVT+A ++ V DPMTGS LR PG +L+SPD CR IFDGRMRYDL++D Sbjct: 140 EQPHDADRIPVTEAHRRGVVDPMTGSILRVPGVGDLISPDSCRVSTPIFDGRMRYDLRMD 199 Query: 191 FKRVEIVKAERGYHGPALVCALYFVPISGYIPDRPVIKYLAAQRNIEIAFVPIAGTRLLV 250 +KR+E VKAE+GY GP LVC +YF P+SGYIPDR IKYL QR +E+ PIAGTR+LV Sbjct: 200 YKRIETVKAEKGYQGPVLVCGIYFTPVSGYIPDRAAIKYLVEQRGMEVWLAPIAGTRMLV 259 Query: 251 PFRMTIPTPLGQAMLEATSFVTTAAPPR-VAKTQ 283 PFR+ IPTPLG A+L+AT FVT A PP+ V++TQ Sbjct: 260 PFRLKIPTPLGNAVLQATQFVTKATPPKSVSRTQ 293 >ref|YP_484169.1| hypothetical protein RPB_0547 [Rhodopseudomonas palustris HaA2] gb|ABD05258.1| hypothetical protein RPB_0547 [Rhodopseudomonas palustris HaA2] Length = 296 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 162/251 (64%), Positives = 201/251 (80%) Query: 33 QGRLDAQYEATLAGIPVGKGSWTIEIGDDTFSASAQGGTAGLLKAFSGGSGAGASQGRVV 92 QG+LDA+YEATLAGI VGKG+W IE+ DD ++A+A G T+G+++AFS G G+G +QGR+V Sbjct: 44 QGKLDARYEATLAGIEVGKGAWVIEVTDDGYAAAANGATSGVMQAFSRGHGSGEAQGRIV 103 Query: 93 NGALAASSYTATTTTSKKSETIRMVLANGGIKESAIEPEPPVDADRLPVTDAQKKNVFDP 152 NG A +Y A T ++KK ETIR+ LANG +KES+IEPE P DADR+PVTDA ++ V DP Sbjct: 104 NGQFAPMNYMAITASAKKIETIRITLANGNVKESSIEPEQPPDADRIPVTDAHRRGVVDP 163 Query: 153 MTGSFLRAPGNAELMSPDICRSGAGIFDGRMRYDLKLDFKRVEIVKAERGYHGPALVCAL 212 MTGSFLR PG +LMSP+ CR IFDGRMRYDL+LD+KR E+VKAE+GY GP LVC + Sbjct: 164 MTGSFLRVPGTGDLMSPESCRVSTPIFDGRMRYDLRLDYKRTEMVKAEKGYQGPVLVCGV 223 Query: 213 YFVPISGYIPDRPVIKYLAAQRNIEIAFVPIAGTRLLVPFRMTIPTPLGQAMLEATSFVT 272 YF P+SGYIPDR IKYL QRN+E+ PIAGTR+LVPFRM IPTPLG A+L+AT FVT Sbjct: 224 YFTPVSGYIPDRAAIKYLTEQRNMEVWLAPIAGTRVLVPFRMKIPTPLGNAVLQATQFVT 283 Query: 273 TAAPPRVAKTQ 283 TA PP+ A ++ Sbjct: 284 TATPPKSAASR 294