BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0133.p (501 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00053247.2| COG3025: Uncharacterized conserved protein [M... 267 3e-69 ref|YP_421335.1| hypothetical protein amb1972 [Magnetospirillum ... 259 8e-67 emb|CAJ30037.1| conserved hypothetical protein [Magnetospirillum... 253 7e-65 ref|YP_001928107.1| CHAD domain containing protein [Methylobacte... 239 6e-61 ref|YP_001769756.1| CHAD domain-containing protein [Methylobacte... 237 4e-60 >ref|ZP_00053247.2| COG3025: Uncharacterized conserved protein [Magnetospirillum magnetotacticum MS-1] Length = 511 Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 179/467 (38%), Positives = 248/467 (53%), Gaps = 23/467 (4%) Query: 4 ETELKFRVPARKLKGLTK-PRIAGSKSGAPSESDLVSTYFDTTKHKLRRHGLTLRVRRDG 62 E ELK + L + + P ++ + P+ L S Y+DT+ H L G+ +RVRR G Sbjct: 5 EIELKLALAPEDLARIAQRPCLSAGRLAEPTSKRLSSIYYDTSDHILASQGIAVRVRRTG 64 Query: 63 ANYVQTIKSGAGPQ----FERGEWETDLADGHLDLDNAEGTPLEKLASDRLRHKLKPMFA 118 + +VQT+K+ AG F+R EWE LA LD + T L A L L P+F+ Sbjct: 65 SGFVQTVKT-AGTSVSGLFDRDEWEVPLASPDLDAEQLRLTGLAAFADGELADLLTPVFS 123 Query: 119 TSVRRITVPLRTKRSEIELAIDRGYTTAGRRSRRIDEVELELKSGRPLDLFRIARALERK 178 T V R+ + L + E E+A+DRG G R I EVELEL SG P LFR+A ++ + Sbjct: 124 TEVDRVLIRLGGEGWEAEVALDRGALVVGDRREEISEVELELVSGTPAHLFRLATHIQAE 183 Query: 179 AAAELDLRSKAEHGYELAGGEEHVVVSAGSIVLDAGLTAGGAFRVIARAALRHFSSNADA 238 AA SK+E GY LA G+ VV A + +L +T +FR IARA L H N Sbjct: 184 TAARPLCLSKSERGYSLAAGKTAPVVKAKAPILTPAMTVEESFRAIARACLEHLMLNERC 243 Query: 239 VREGEA-EGIHQMRVGLRRLRAAISLFSKILTVAPTEDVKTQLKWLTNALAPARELDVFV 297 + EA E IHQMRV +RR+R+AI +F + E +K L+WL L PAR+ DVF+ Sbjct: 244 LLATEAGEAIHQMRVAMRRMRSAIKVFKAVTEGPDLERIKDDLRWLLAHLGPARDADVFL 303 Query: 298 KEDIEP--ASHDALLRRGGKAIRQEFSDRRDRAFAGARQAVNSRRYRLMLIDTLQWIEAK 355 E ++P A+H G A+R + R+ A A AV S+RY M ++ +W+E Sbjct: 304 SEIVDPVLAAHPG--NAGLIALRAHWRKDRETKLAAAISAVKSKRYATMTLNLGRWVETG 361 Query: 356 QTVAAEDEGG------PIEEFAAALLHRRI-RKLRKNGRRLDALSARQRHKVRIGAKKLR 408 + G PI FAA + + + R L++ G L LS QRH VRI K++R Sbjct: 362 DWLTPSHGGARRRLAEPIATFAAGRVGKVVTRLLKEGGETLSRLSPEQRHAVRIRGKQVR 421 Query: 409 YAIDFFESLFPRKGERKQLARLSRHLKRVQDALGSLNDF-VAHRKLA 454 YA +FF SL PRK + L+ L+ +QD LG LND VA KL+ Sbjct: 422 YAGEFFASLVPRKSTKVYLSELA----ELQDVLGKLNDIAVAGPKLS 464 >ref|YP_421335.1| hypothetical protein amb1972 [Magnetospirillum magneticum AMB-1] dbj|BAE50776.1| Uncharacterized conserved protein [Magnetospirillum magneticum AMB-1] Length = 511 Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 198/509 (38%), Positives = 260/509 (51%), Gaps = 36/509 (7%) Query: 4 ETELKFRVPARKLKGLTK-PRIAGSKSGAPSESDLVSTYFDTTKHKLRRHGLTLRVRRDG 62 E ELK + L + + P ++ + P+ L S YFDT L G+ +RVRR G Sbjct: 5 EIELKLALAPEDLARIAQRPCLSAGRLAEPTSKRLSSIYFDTPDFILAAQGIAVRVRRTG 64 Query: 63 ANYVQTIKSGAGPQ----FERGEWETDLADGHLDLDNAEGTPLEKLASDRLRHKLKPMFA 118 + +VQT+K+ AG F+R EWE + L+ + T L A L +L P+FA Sbjct: 65 SGFVQTVKT-AGTSVSGLFDRDEWEVPVPSSELNAEQLRLTGLAAFADGELADRLSPVFA 123 Query: 119 TSVRRITVPLRTKRSEIELAIDRGYTTAGRRSRRIDEVELELKSGRPLDLFRIARALERK 178 T V R L E E+A+DRG AG R I EVELEL SG P LF++A + + Sbjct: 124 TEVERSLFRLGGDGWEAEVALDRGAVIAGDRREEISEVELELVSGTPAHLFQLAAGILEE 183 Query: 179 AAAELDLRSKAEHGYELAGGEEHVVVSAGSIVLDAGLTAGGAFRVIARAALRHFSSNADA 238 AAA SK+E GY LA G+ VV A S L +T +FR IARA L H N Sbjct: 184 AAARPMCLSKSERGYNLAAGKTAPVVKAKSPSLSTAMTVEDSFRAIARACLEHLMLNERC 243 Query: 239 VREGEA-EGIHQMRVGLRRLRAAISLFSKILTVAPTEDVKTQLKWLTNALAPARELDVFV 297 + EA E IHQMRV +RRLR+AI +F + A VK L+WL L PAR+ +VF+ Sbjct: 244 LLATEAGEAIHQMRVAMRRLRSAIKVFKTVTAGADLARVKDDLRWLLGHLGPARDAEVFL 303 Query: 298 KEDIEP--ASH--DALLRRGGKAIRQEFSDRRDRAFAGARQAVNSRRYRLMLIDTLQWIE 353 E + P A+H DA G A+ + R+ A A AV SRRY M+++ +W+E Sbjct: 304 SEIVAPVMAAHPDDA----GLAALHAHWRKDREAKLAAAIAAVKSRRYAAMILNLGRWVE 359 Query: 354 AKQTVAAEDEGGP---IEEFAAALLHRRIRK-----LRKNGRRLDALSARQRHKVRIGAK 405 A GGP + E AA RR+ K LR+ G L LS QRH VRI K Sbjct: 360 TGDW-QAPTHGGPRRRLAEPIAAFAARRVSKAVRNLLREGGESLSRLSPEQRHAVRIRGK 418 Query: 406 KLRYAIDFFESLFPRKGERKQLARLSRHLKRVQDALGSLNDF-VAHRKLAVDAALKAPHR 464 ++RYA +FF SL PRK + LA LS +QD LG LND VA KL+ A Sbjct: 419 QVRYAGEFFASLVPRKTTKVFLAELS----ELQDVLGQLNDIAVAGPKLSGRGA------ 468 Query: 465 KERASAFASGVVLGREEQAVKPLIKVAAK 493 E S+ A+G+V G + L+ A K Sbjct: 469 -ETGSSRAAGLVAGWHQSRRSALLGAADK 496 >emb|CAJ30037.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense MSR-1] emb|CAM77953.1| Conserved hypothetical protein, adenylate cyclase domain [Magnetospirillum gryphiswaldense MSR-1] Length = 514 Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 170/490 (34%), Positives = 260/490 (53%), Gaps = 22/490 (4%) Query: 2 AAETELKFRVPARKLKGLTK-PRIAGSKSGAPSESDLVSTYFDTTKHKLRRHGLTLRVRR 60 + ETELK + A L + + P IA K+G L+STY+DT +LR+ G++LR+R+ Sbjct: 14 STETELKLCLDAALLSRVPRLPAIAAYKTGKGRSKTLISTYYDTPTRELRQSGVSLRLRQ 73 Query: 61 DGANYVQTIKSG---AGPQFERGEWETDLADGHLDLDNAEGTPLEKLASDRLRHKLKPMF 117 G ++ QT+K+ A FERGEWE + L + T L D L +L P+F Sbjct: 74 SGRDWTQTVKTEGRRASGLFERGEWEISAPLAQVHLPHLLATELPVFRLDGLIERLTPVF 133 Query: 118 ATSVRRITVPLRTKRSEIELAIDRGYTTAGRRSRRIDEVELELKSGRPLDLFRIARALER 177 T VRR L T +IELA+D+G AG R + E+ELEL+ G LF +A+ + Sbjct: 134 TTQVRRTIYLLATPEWDIELALDQGEILAGDRRMPLAEIELELRRGPVTALFGLAQDIAA 193 Query: 178 KAAAELDLRSKAEHGYELAGGEEHVVVSAGSIVLDAGLTAGGAFRVIARAALRHFSSNAD 237 + +K++ GY LA G A + L+A + AG +F VIA LRH SN Sbjct: 194 GFPCRVLTSAKSDRGYALADGGAPRPTKAPPLDLNADMNAGQSFSVIAGNCLRHLQSNEA 253 Query: 238 AVREGEA-EGIHQMRVGLRRLRAAISLFSKILTVAPTEDVKTQLKWLTNALAPARELDVF 296 A+R +A E +HQMRV LRRLR+A+ +F ++ + +KT+++WL L PAR+ DVF Sbjct: 254 ALRGDQAGEAVHQMRVALRRLRSALKVFKPLVHGTELDTIKTEMRWLLGHLGPARDADVF 313 Query: 297 VKEDIEPASHDALLRRGGKAIRQEFSDRRDRAFAGARQAVNSRRYRLMLIDTLQWIEAKQ 356 + E I P + +R+E+ ++R +AF A A++ R+ +++ QW+ Sbjct: 314 LAEIIAPVQENHPDAPALAVLREEWLEQRQQAFVAATAAIDDNRFTRLMLTLGQWLAQAP 373 Query: 357 TVAAEDEGGPIEEFAAALL---HRRIRKLRKNGRRLDALSARQRHKVRIGAKKLRYAIDF 413 E + +A +L HRR+ L+ G L L A + H+VRI K++RY +F Sbjct: 374 WTTTEAAAMSLGRYARQVLKKSHRRL--LKAGGDNLTHLPAPELHQVRILGKQMRYTGEF 431 Query: 414 FESLFPRKGERKQLARLSRHLKRVQDALGSLNDF-VAHRKLAVDAALKAPHRKERASAFA 472 F +L+PR + L L+ +Q++LG LND VA LA HR++ A+A Sbjct: 432 FATLYPRAETKPFLGLLA----ELQESLGGLNDLTVAGITLA-----GTHHRQD--WAWA 480 Query: 473 SGVVLGREEQ 482 +G++ G E Sbjct: 481 AGMICGWHEH 490 >ref|YP_001928107.1| CHAD domain containing protein [Methylobacterium populi BJ001] gb|ACB83531.1| CHAD domain containing protein [Methylobacterium populi BJ001] Length = 513 Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 170/464 (36%), Positives = 237/464 (51%), Gaps = 19/464 (4%) Query: 4 ETELKFRVPARKLKGLTK-PRIAGSKSGAPSESDLVSTYFDTTKHKLRRHGLTLRVRRDG 62 E ELK A L L + PR+ G+ L S YFDT +LR G LRVR Sbjct: 6 EIELKLVCDASDLTILREHPRLRGAV--GEERDQLNSVYFDTHDGRLREAGYVLRVRGTK 63 Query: 63 ANYVQTIKSGAGPQFERGEWETDLADGHLDLDNAEGTPLEKLASDRLRHKLKPMFATSVR 122 YVQT K ER EWE + D D EGTPL KL KL PMF +V Sbjct: 64 DGYVQTAKGAGDGLLERSEWERPVEGPEPDRDALEGTPLAKLLGKNT--KLAPMFTVAVE 121 Query: 123 RITVPLRTKRSEIELAIDRG--YTTAGRRSR---RIDEVELELKSGRPLDLFRIARALER 177 R+ + S IE+A+D+G TAG+R+ I E+ELELK G P DLF +A + Sbjct: 122 RLAYHVEQGASRIEVALDQGRITQTAGKRASDAVTISEIELELKEGSPADLFDLAHEMCS 181 Query: 178 KAAAELDLRSKAEHGYELAGGEEHVVVSAGSIVLDAGLTAGGAFRVIARAALRHFSSNAD 237 + + L +R+K E G+ L GE + + A ++L +TA AFR IA A LRH N D Sbjct: 182 QVSVRLGVRTKPERGFALIDGEPNGMRKAEPVLLLEEMTAADAFRSIAHACLRHMRLNED 241 Query: 238 AVREGEAEG-IHQMRVGLRRLRAAISLFSKILTVAPTEDVKTQLKWLTNALAPARELDVF 296 + E G +HQ RV +RRLR+A SLF ++ +E ++ LK L+ L AR LDVF Sbjct: 242 VILERRDVGALHQTRVAIRRLRSAFSLFGDMIADGRSEAMRAALKRLSAPLGRARNLDVF 301 Query: 297 VKEDIEPASHDALLRRGGK-AIRQEFSDRRDRAFAGARQAVNSRRYRLMLIDTLQWIEAK 355 + + PA GG + + +R A+ R+ + S +R +++ + WI A Sbjct: 302 LTRTL-PAERARHPDEGGLLNLEKHLEAQRTEAYEAVRKTLASEEWRRFILELVAWINAG 360 Query: 356 QTVAA------EDEGGPIEEFAAALLHRRIRKLRKNGRRLDALSARQRHKVRIGAKKLRY 409 + + P FAA +L +R R+++K GR L++L+A +RH VRI AKKLRY Sbjct: 361 SWLTSGDDRDARRRDQPAIAFAAGVLEKRRRQVKKRGRDLESLNAEERHNVRIAAKKLRY 420 Query: 410 AIDFFESLFPRKGERKQLARLSRHLKRVQDALGSLNDFVAHRKL 453 +FF L+ K K+ L+ +QD+LG LND +L Sbjct: 421 GAEFFAGLYIDKKASKRHMAFVAALEDLQDSLGDLNDITTGHEL 464 >ref|YP_001769756.1| CHAD domain-containing protein [Methylobacterium sp. 4-46] gb|ACA17322.1| CHAD domain containing protein [Methylobacterium sp. 4-46] Length = 511 Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 178/469 (37%), Positives = 235/469 (50%), Gaps = 31/469 (6%) Query: 4 ETELKFRVPARKLKGLTKPRIAGSKSGAPSESDLVSTYFDTTKHKLRRHGLTLRVRRDGA 63 ETELK A L L++ + G G E+ L S YFDT +LR G TLRVRRDG Sbjct: 6 ETELKLEFEASDLAALSEHPLLG---GDEREARLTSVYFDTEDRRLREAGFTLRVRRDGD 62 Query: 64 NYVQTIK---SGAGPQFERGEWETDLADGHLDLDNAEGTPLEKLASDRLRHK--LKPMFA 118 +VQT+K +GAG F+R EWE + DL TP A D L K L+P+F+ Sbjct: 63 RHVQTVKAAGTGAG-LFDRPEWEWPVDGAEPDLARLGETP----AGDVLGRKSVLRPLFS 117 Query: 119 TSVRRITVPLRTKRSEIELAIDRGYTT----AGRRSRRIDEVELELKSGRPLDLFRIARA 174 V R T + S IE+A+DRG T G R I E+ELELK G DLF +AR Sbjct: 118 AGVERSTRVIARGGSRIEVALDRGRITLLDGEGDRVAPIHELELELKDGSAADLFGLARE 177 Query: 175 LERKAAAELDLRSKAEHGYELAGGEEHVVVSAGSIVLDAGLTAGGAFRVIARAALRHFSS 234 + L + +KAE GY L G A + LD +AG AF+ +A A LRH Sbjct: 178 IGASVPLRLGVMTKAERGYSLLAGRLDRASKAEPVRLDPEASAGEAFQAVAHACLRHMRL 237 Query: 235 N-ADAVREGEAEGIHQMRVGLRRLRAAISLFSKILTVAPTEDVKTQLKWLTNALAPAREL 293 N A + +A+ +HQ+RV LRRLR+A SLF ++ T ++ +L+ L AR L Sbjct: 238 NEAVLLDHRDADALHQLRVSLRRLRSAFSLFGDLVEDHRTPTIRAELRRLGEPFGQARNL 297 Query: 294 DVFVKEDIEPASHDALLRRGGKA----IRQEFSDRRDRAFAGARQAVNSRRYRLMLIDTL 349 DVF+ + PA RR +A + R RA+ + +RL L+D + Sbjct: 298 DVFLASTL-PAER---ARRPDEAGLLRLESHLEGERSRAYEAVGAVLRGEEWRLFLLDLI 353 Query: 350 QWIEAKQ-----TVAAEDEGGPIEEFAAALLHRRIRKLRKNGRRLDALSARQRHKVRIGA 404 WI+A A GP FA L RR R+++K GR LD L RH+VRI A Sbjct: 354 AWIDAGPWREAGAPQAARRDGPARAFATEELERRRRQVKKRGRHLDELDPEARHRVRIAA 413 Query: 405 KKLRYAIDFFESLFPRKGERKQLARLSRHLKRVQDALGSLNDFVAHRKL 453 KKLRY +FF SL+P+ K+ + L +QD LG LND L Sbjct: 414 KKLRYGAEFFGSLYPKPKAVKRHRTFVKALADLQDCLGDLNDIATAHTL 462